RNA–Protein interactions for RNA: ENST00000550221.1

AC007424.1-204, humanhuman

TSL 3

Gene AC007424.1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-204ENST00000550221 HRO43593 1189 aa11.49□□□□□ -0.57
AC007424.1-204ENST00000550221 DDX12PQ92771 950 aa11.48□□□□□ -0.57
AC007424.1-204ENST00000550221 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
AC007424.1-204ENST00000550221 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
AC007424.1-204ENST00000550221 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
AC007424.1-204ENST00000550221 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
AC007424.1-204ENST00000550221 NBR1Q14596 966 aa11.43□□□□□ -0.58
AC007424.1-204ENST00000550221 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
AC007424.1-204ENST00000550221 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
AC007424.1-204ENST00000550221 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
AC007424.1-204ENST00000550221 COL9A1P20849 921 aa11.4□□□□□ -0.58
AC007424.1-204ENST00000550221 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
AC007424.1-204ENST00000550221 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
AC007424.1-204ENST00000550221 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
AC007424.1-204ENST00000550221 GRXCR2A6NFK2 248 aa11.38□□□□□ -0.59
AC007424.1-204ENST00000550221 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
AC007424.1-204ENST00000550221 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
AC007424.1-204ENST00000550221 MAP3K7O43318 606 aa11.37□□□□□ -0.59
AC007424.1-204ENST00000550221 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
AC007424.1-204ENST00000550221 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
AC007424.1-204ENST00000550221 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
AC007424.1-204ENST00000550221 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
AC007424.1-204ENST00000550221 PROX2Q3B8N5 592 aa11.34□□□□□ -0.59
AC007424.1-204ENST00000550221 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
AC007424.1-204ENST00000550221 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
AC007424.1-204ENST00000550221 KCTD12Q96CX2 325 aaKnown RBP11.33□□□□□ -0.6
AC007424.1-204ENST00000550221 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
AC007424.1-204ENST00000550221 OSBPP22059 807 aa11.32□□□□□ -0.6
AC007424.1-204ENST00000550221 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
AC007424.1-204ENST00000550221 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
AC007424.1-204ENST00000550221 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
AC007424.1-204ENST00000550221 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
AC007424.1-204ENST00000550221 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
AC007424.1-204ENST00000550221 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
AC007424.1-204ENST00000550221 WNT2BQ93097 391 aa11.27□□□□□ -0.61
AC007424.1-204ENST00000550221 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
AC007424.1-204ENST00000550221 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
AC007424.1-204ENST00000550221 PRSS12P56730 875 aa11.24□□□□□ -0.61
AC007424.1-204ENST00000550221 THSD4Q6ZMP0 1018 aa11.24□□□□□ -0.61
AC007424.1-204ENST00000550221 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
AC007424.1-204ENST00000550221 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
AC007424.1-204ENST00000550221 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
AC007424.1-204ENST00000550221 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
AC007424.1-204ENST00000550221 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.61
AC007424.1-204ENST00000550221 PTPN5P54829 565 aa11.2□□□□□ -0.62
AC007424.1-204ENST00000550221 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
AC007424.1-204ENST00000550221 SEPT9Q9UHD8 586 aaPredicted RBP11.2□□□□□ -0.62
AC007424.1-204ENST00000550221 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
AC007424.1-204ENST00000550221 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
AC007424.1-204ENST00000550221 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
AC007424.1-204ENST00000550221 SEMA3EO15041 775 aa11.18□□□□□ -0.62
AC007424.1-204ENST00000550221 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
AC007424.1-204ENST00000550221 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
AC007424.1-204ENST00000550221 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
AC007424.1-204ENST00000550221 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
AC007424.1-204ENST00000550221 TATDN2Q93075 761 aa11.14□□□□□ -0.63
AC007424.1-204ENST00000550221 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
AC007424.1-204ENST00000550221 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
AC007424.1-204ENST00000550221 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
AC007424.1-204ENST00000550221 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
AC007424.1-204ENST00000550221 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
AC007424.1-204ENST00000550221 BCAMP50895 628 aa11.12□□□□□ -0.63
AC007424.1-204ENST00000550221 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
AC007424.1-204ENST00000550221 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
AC007424.1-204ENST00000550221 SMAPO00193 183 aa11.11□□□□□ -0.63
AC007424.1-204ENST00000550221 PTGDRQ13258 359 aa11.11□□□□□ -0.63
AC007424.1-204ENST00000550221 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.11□□□□□ -0.63
AC007424.1-204ENST00000550221 NUTM2FA1L443 756 aa11.1□□□□□ -0.63
AC007424.1-204ENST00000550221 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
AC007424.1-204ENST00000550221 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
AC007424.1-204ENST00000550221 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
AC007424.1-204ENST00000550221 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
AC007424.1-204ENST00000550221 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
AC007424.1-204ENST00000550221 FCHSD2O94868 740 aa11.06□□□□□ -0.64
AC007424.1-204ENST00000550221 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
AC007424.1-204ENST00000550221 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
AC007424.1-204ENST00000550221 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
AC007424.1-204ENST00000550221 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
AC007424.1-204ENST00000550221 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
AC007424.1-204ENST00000550221 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
AC007424.1-204ENST00000550221 PPP4CP60510 307 aa11.01□□□□□ -0.65
AC007424.1-204ENST00000550221 EYA1Q99502 592 aa11.01□□□□□ -0.65
AC007424.1-204ENST00000550221 HIC1Q14526 733 aa10.99□□□□□ -0.65
AC007424.1-204ENST00000550221 RBM46Q8TBY0 533 aaKnown RBP10.99□□□□□ -0.65
AC007424.1-204ENST00000550221 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
AC007424.1-204ENST00000550221 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
AC007424.1-204ENST00000550221 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
AC007424.1-204ENST00000550221 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
AC007424.1-204ENST00000550221 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
AC007424.1-204ENST00000550221 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
AC007424.1-204ENST00000550221 RNF40O75150 1001 aa10.96□□□□□ -0.65
AC007424.1-204ENST00000550221 SWT1Q5T5J6 900 aaKnown RBP10.96□□□□□ -0.65
AC007424.1-204ENST00000550221 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
AC007424.1-204ENST00000550221 DNAJB2P25686 324 aa10.95□□□□□ -0.66
AC007424.1-204ENST00000550221 GNPATO15228 680 aa10.93□□□□□ -0.66
AC007424.1-204ENST00000550221 OATP04181 439 aa10.93□□□□□ -0.66
AC007424.1-204ENST00000550221 GPR37O15354 613 aa10.92□□□□□ -0.66
AC007424.1-204ENST00000550221 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
AC007424.1-204ENST00000550221 KCNC4Q03721 635 aa10.91□□□□□ -0.66
AC007424.1-204ENST00000550221 RCCD1A6NED2 376 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms