RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE2N-203ENST00000549490 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
UBE2N-203ENST00000549490 VWDEQ8N2E2 1590 aa14.68□□□□□ -0.06
UBE2N-203ENST00000549490 THEMISQ8N1K5 641 aaPredicted RBP14.67□□□□□ -0.06
UBE2N-203ENST00000549490 RGS17Q9UGC6 210 aaPredicted RBP14.67□□□□□ -0.06
UBE2N-203ENST00000549490 ZNF644Q9H582 1327 aaPredicted RBP14.66□□□□□ -0.06
UBE2N-203ENST00000549490 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
UBE2N-203ENST00000549490 NPHP4O75161 1426 aaPredicted RBP14.65□□□□□ -0.06
UBE2N-203ENST00000549490 DHX29Q7Z478 1369 aaKnown RBP14.64□□□□□ -0.07
UBE2N-203ENST00000549490 MED14O60244 1454 aa14.63□□□□□ -0.07
UBE2N-203ENST00000549490 KIF3BO15066 747 aa14.63□□□□□ -0.07
UBE2N-203ENST00000549490 PZPP20742 1482 aa14.63□□□□□ -0.07
UBE2N-203ENST00000549490 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
UBE2N-203ENST00000549490 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
UBE2N-203ENST00000549490 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
UBE2N-203ENST00000549490 MBD5Q9P267 1494 aa14.61□□□□□ -0.07
UBE2N-203ENST00000549490 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
UBE2N-203ENST00000549490 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
UBE2N-203ENST00000549490 RTEL1-TNFRSF6BF6WH68 1400 aa14.6□□□□□ -0.07
UBE2N-203ENST00000549490 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
UBE2N-203ENST00000549490 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
UBE2N-203ENST00000549490 FAM135AQ9P2D6 1515 aa14.59□□□□□ -0.07
UBE2N-203ENST00000549490 UGGT1Q9NYU2 1555 aa14.58□□□□□ -0.08
UBE2N-203ENST00000549490 KDM5DQ9BY66 1539 aa14.57□□□□□ -0.08
UBE2N-203ENST00000549490 DEPDC5O75140 1603 aa14.57□□□□□ -0.08
UBE2N-203ENST00000549490 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
UBE2N-203ENST00000549490 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
UBE2N-203ENST00000549490 STRCP1A6NGW2 1772 aa14.53□□□□□ -0.08
UBE2N-203ENST00000549490 RNF17Q9BXT8 1623 aaKnown RBP14.53□□□□□ -0.08
UBE2N-203ENST00000549490 IQGAP1P46940 1657 aa14.52□□□□□ -0.08
UBE2N-203ENST00000549490 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
UBE2N-203ENST00000549490 SYNMO15061 1565 aa14.5□□□□□ -0.09
UBE2N-203ENST00000549490 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
UBE2N-203ENST00000549490 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
UBE2N-203ENST00000549490 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
UBE2N-203ENST00000549490 LTKP29376 864 aa14.48□□□□□ -0.09
UBE2N-203ENST00000549490 RSPH4AQ5TD94 716 aa14.48□□□□□ -0.09
UBE2N-203ENST00000549490 SCAF11Q99590 1463 aaKnown RBP14.46□□□□□ -0.09
UBE2N-203ENST00000549490 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
UBE2N-203ENST00000549490 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
UBE2N-203ENST00000549490 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
UBE2N-203ENST00000549490 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
UBE2N-203ENST00000549490 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
UBE2N-203ENST00000549490 ZC3H13Q5T200 1668 aaKnown RBP14.44□□□□□ -0.1
UBE2N-203ENST00000549490 ABCC3O15438 1527 aa14.44□□□□□ -0.1
UBE2N-203ENST00000549490 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
UBE2N-203ENST00000549490 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
UBE2N-203ENST00000549490 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
UBE2N-203ENST00000549490 EID1Q9Y6B2 187 aa14.41□□□□□ -0.1
UBE2N-203ENST00000549490 TMEM94Q12767 1356 aa14.41□□□□□ -0.1
UBE2N-203ENST00000549490 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
UBE2N-203ENST00000549490 SLIT1O75093 1534 aa14.39□□□□□ -0.11
UBE2N-203ENST00000549490 KCNA6P17658 529 aa14.38□□□□□ -0.11
UBE2N-203ENST00000549490 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
UBE2N-203ENST00000549490 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
UBE2N-203ENST00000549490 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
UBE2N-203ENST00000549490 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
UBE2N-203ENST00000549490 ARHGEF5Q12774 1597 aa14.36□□□□□ -0.11
UBE2N-203ENST00000549490 UPF1Q92900 1129 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBE2N-203ENST00000549490 TMEM2Q9UHN6 1383 aa14.35□□□□□ -0.11
UBE2N-203ENST00000549490 SLC26A8Q96RN1 970 aa14.34□□□□□ -0.11
UBE2N-203ENST00000549490 SETD1AO15047 1707 aaKnown RBP14.34□□□□□ -0.11
UBE2N-203ENST00000549490 JCADQ9P266 1359 aa14.34□□□□□ -0.11
UBE2N-203ENST00000549490 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
UBE2N-203ENST00000549490 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
UBE2N-203ENST00000549490 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
UBE2N-203ENST00000549490 SLAIN2Q9P270 581 aa14.33□□□□□ -0.12
UBE2N-203ENST00000549490 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
UBE2N-203ENST00000549490 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
UBE2N-203ENST00000549490 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
UBE2N-203ENST00000549490 TRIM52Q96A61 297 aa14.3□□□□□ -0.12
UBE2N-203ENST00000549490 MAST1Q9Y2H9 1570 aa14.3□□□□□ -0.12
UBE2N-203ENST00000549490 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
UBE2N-203ENST00000549490 IDI1Q13907 227 aa14.29□□□□□ -0.12
UBE2N-203ENST00000549490 MSH6P52701 1360 aa14.29□□□□□ -0.12
UBE2N-203ENST00000549490 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
UBE2N-203ENST00000549490 ZNF772Q68DY9 489 aaPredicted RBP14.28□□□□□ -0.12
UBE2N-203ENST00000549490 CEP152O94986 1710 aa14.27□□□□□ -0.12
UBE2N-203ENST00000549490 TET3O43151 1660 aa14.27□□□□□ -0.12
UBE2N-203ENST00000549490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE2N-203ENST00000549490 LRP6O75581 1613 aa14.26□□□□□ -0.13
UBE2N-203ENST00000549490 SPATA31A6Q5VVP1 1343 aa14.26□□□□□ -0.13
UBE2N-203ENST00000549490 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
UBE2N-203ENST00000549490 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
UBE2N-203ENST00000549490 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
UBE2N-203ENST00000549490 DUOX2Q9NRD8 1548 aa14.25□□□□□ -0.13
UBE2N-203ENST00000549490 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
UBE2N-203ENST00000549490 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
UBE2N-203ENST00000549490 EFCAB6Q5THR3 1501 aa14.25□□□□□ -0.13
UBE2N-203ENST00000549490 BCANQ96GW7 911 aa14.24□□□□□ -0.13
UBE2N-203ENST00000549490 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
UBE2N-203ENST00000549490 KIF15Q9NS87 1388 aa14.23□□□□□ -0.13
UBE2N-203ENST00000549490 RXRBP28702 533 aa14.23□□□□□ -0.13
UBE2N-203ENST00000549490 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
UBE2N-203ENST00000549490 FGD6Q6ZV73 1430 aa14.23□□□□□ -0.13
UBE2N-203ENST00000549490 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
UBE2N-203ENST00000549490 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
UBE2N-203ENST00000549490 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
UBE2N-203ENST00000549490 ERBINQ96RT1 1412 aa14.2□□□□□ -0.14
UBE2N-203ENST00000549490 KANK1Q14678 1352 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms