RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
USP15-209ENST00000548620 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
USP15-209ENST00000548620 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
USP15-209ENST00000548620 PTPREP23469 700 aa12.97□□□□□ -0.33
USP15-209ENST00000548620 PSEN2P49810 448 aa12.97□□□□□ -0.33
USP15-209ENST00000548620 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
USP15-209ENST00000548620 BCANQ96GW7 911 aa12.97□□□□□ -0.33
USP15-209ENST00000548620 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
USP15-209ENST00000548620 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
USP15-209ENST00000548620 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
USP15-209ENST00000548620 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
USP15-209ENST00000548620 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
USP15-209ENST00000548620 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
USP15-209ENST00000548620 COL9A1P20849 921 aa12.92□□□□□ -0.34
USP15-209ENST00000548620 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
USP15-209ENST00000548620 LSM11P83369 360 aaKnown RBP eCLIP12.9□□□□□ -0.34
USP15-209ENST00000548620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
USP15-209ENST00000548620 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
USP15-209ENST00000548620 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
USP15-209ENST00000548620 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
USP15-209ENST00000548620 ZBED2Q9BTP6 218 aa12.86□□□□□ -0.35
USP15-209ENST00000548620 PTGDRQ13258 359 aa12.85□□□□□ -0.35
USP15-209ENST00000548620 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
USP15-209ENST00000548620 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
USP15-209ENST00000548620 GPR37O15354 613 aa12.83□□□□□ -0.36
USP15-209ENST00000548620 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
USP15-209ENST00000548620 TK2O00142 265 aa12.82□□□□□ -0.36
USP15-209ENST00000548620 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
USP15-209ENST00000548620 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
USP15-209ENST00000548620 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
USP15-209ENST00000548620 ADGRD1Q6QNK2 874 aa12.81□□□□□ -0.36
USP15-209ENST00000548620 FCHSD2O94868 740 aa12.8□□□□□ -0.36
USP15-209ENST00000548620 PRSS12P56730 875 aa12.79□□□□□ -0.36
USP15-209ENST00000548620 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
USP15-209ENST00000548620 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
USP15-209ENST00000548620 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
USP15-209ENST00000548620 TSKSQ9UJT2 592 aa12.77□□□□□ -0.37
USP15-209ENST00000548620 HRO43593 1189 aa12.76□□□□□ -0.37
USP15-209ENST00000548620 ONECUT3O60422 494 aaPredicted RBP12.76□□□□□ -0.37
USP15-209ENST00000548620 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
USP15-209ENST00000548620 HIC1Q14526 733 aa12.75□□□□□ -0.37
USP15-209ENST00000548620 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
USP15-209ENST00000548620 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
USP15-209ENST00000548620 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
USP15-209ENST00000548620 BHMG1C9JSJ3 638 aaPredicted RBP12.73□□□□□ -0.37
USP15-209ENST00000548620 GNPATO15228 680 aa12.72□□□□□ -0.37
USP15-209ENST00000548620 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
USP15-209ENST00000548620 FECHP22830 423 aa12.71□□□□□ -0.37
USP15-209ENST00000548620 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
USP15-209ENST00000548620 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
USP15-209ENST00000548620 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
USP15-209ENST00000548620 SPNS2Q8IVW8 549 aa12.69□□□□□ -0.38
USP15-209ENST00000548620 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
USP15-209ENST00000548620 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
USP15-209ENST00000548620 ZMYND10O75800 440 aa12.65□□□□□ -0.38
USP15-209ENST00000548620 TATDN2Q93075 761 aa12.65□□□□□ -0.38
USP15-209ENST00000548620 SEPT9Q9UHD8 586 aaPredicted RBP12.64□□□□□ -0.39
USP15-209ENST00000548620 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
USP15-209ENST00000548620 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
USP15-209ENST00000548620 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
USP15-209ENST00000548620 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
USP15-209ENST00000548620 SMAPO00193 183 aa12.62□□□□□ -0.39
USP15-209ENST00000548620 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
USP15-209ENST00000548620 LAPTM4BQ86VI4 370 aa12.62□□□□□ -0.39
USP15-209ENST00000548620 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
USP15-209ENST00000548620 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
USP15-209ENST00000548620 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
USP15-209ENST00000548620 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
USP15-209ENST00000548620 EYA1Q99502 592 aa12.6□□□□□ -0.39
USP15-209ENST00000548620 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
USP15-209ENST00000548620 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
USP15-209ENST00000548620 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
USP15-209ENST00000548620 IRF6O14896 467 aa12.56□□□□□ -0.4
USP15-209ENST00000548620 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
USP15-209ENST00000548620 PXYLP1Q8TE99 480 aa12.56□□□□□ -0.4
USP15-209ENST00000548620 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
USP15-209ENST00000548620 OATP04181 439 aa12.55□□□□□ -0.4
USP15-209ENST00000548620 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
USP15-209ENST00000548620 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
USP15-209ENST00000548620 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
USP15-209ENST00000548620 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
USP15-209ENST00000548620 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
USP15-209ENST00000548620 WNT2BQ93097 391 aa12.51□□□□□ -0.41
USP15-209ENST00000548620 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
USP15-209ENST00000548620 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
USP15-209ENST00000548620 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
USP15-209ENST00000548620 DNAJB2P25686 324 aa12.49□□□□□ -0.41
USP15-209ENST00000548620 ANKK1Q8NFD2 765 aa12.49□□□□□ -0.41
USP15-209ENST00000548620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
USP15-209ENST00000548620 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
USP15-209ENST00000548620 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
USP15-209ENST00000548620 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
USP15-209ENST00000548620 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
USP15-209ENST00000548620 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
USP15-209ENST00000548620 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
USP15-209ENST00000548620 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.41
USP15-209ENST00000548620 BCAMP50895 628 aa12.45□□□□□ -0.42
USP15-209ENST00000548620 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
USP15-209ENST00000548620 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
USP15-209ENST00000548620 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms