RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 AMPHP49418 695 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 MCTP1Q6DN14 999 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 ODF2Q5BJF6 829 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 HMMRO75330 724 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
ABCA13-207ENST00000544596 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 R3HCC1Q9Y3T6 440 aaKnown RBP10.06□□□□□ -0.8
ABCA13-207ENST00000544596 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
ABCA13-207ENST00000544596 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
ABCA13-207ENST00000544596 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCA13-207ENST00000544596 SYTL4Q96C24 671 aaPredicted RBP10.05□□□□□ -0.8
ABCA13-207ENST00000544596 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
ABCA13-207ENST00000544596 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
ABCA13-207ENST00000544596 GOLGA6L3A6NEY3 463 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 VPS37DQ86XT2 251 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 ZCCHC6Q5VYS8 1495 aaKnown RBP10.04□□□□□ -0.8
ABCA13-207ENST00000544596 BECN2A8MW95 431 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
ABCA13-207ENST00000544596 APPP05067 770 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
ABCA13-207ENST00000544596 IPO7O95373 1038 aaKnown RBP10.03□□□□□ -0.8
ABCA13-207ENST00000544596 NAP1L1P55209 391 aaKnown RBP10.03□□□□□ -0.8
ABCA13-207ENST00000544596 PHF14O94880 888 aa10.02□□□□□ -0.81
ABCA13-207ENST00000544596 CCDC47Q96A33 483 aaKnown RBP10.02□□□□□ -0.81
ABCA13-207ENST00000544596 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
ABCA13-207ENST00000544596 TCERG1O14776 1098 aaKnown RBP10.01□□□□□ -0.81
ABCA13-207ENST00000544596 GPS2Q13227 327 aa10.01□□□□□ -0.81
ABCA13-207ENST00000544596 TRIM29Q14134 588 aa10.01□□□□□ -0.81
ABCA13-207ENST00000544596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.01□□□□□ -0.81
ABCA13-207ENST00000544596 EID1Q9Y6B2 187 aa10.01□□□□□ -0.81
ABCA13-207ENST00000544596 ST18O60284 1047 aa10□□□□□ -0.81
ABCA13-207ENST00000544596 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
ABCA13-207ENST00000544596 SLC4A3P48751 1232 aa10□□□□□ -0.81
ABCA13-207ENST00000544596 CLIP1P30622 1438 aa10□□□□□ -0.81
ABCA13-207ENST00000544596 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
ABCA13-207ENST00000544596 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
ABCA13-207ENST00000544596 HSP90AB2PQ58FF8 381 aa9.99□□□□□ -0.81
ABCA13-207ENST00000544596 PMFBP1Q8TBY8 1022 aa9.99□□□□□ -0.81
ABCA13-207ENST00000544596 ANKRD20A12PQ8NF67 263 aa9.98□□□□□ -0.81
ABCA13-207ENST00000544596 CCDC146Q8IYE0 955 aa9.98□□□□□ -0.81
ABCA13-207ENST00000544596 FYB1O15117 783 aa9.98□□□□□ -0.81
ABCA13-207ENST00000544596 C1orf141Q5JVX7 400 aa9.98□□□□□ -0.81
ABCA13-207ENST00000544596 CPLX2Q6PUV4 134 aaKnown RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 ELL2O00472 640 aaPredicted RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 FOSBP53539 338 aa9.97□□□□□ -0.81
ABCA13-207ENST00000544596 NFXL1Q6ZNB6 911 aa9.97□□□□□ -0.81
ABCA13-207ENST00000544596 ZNF771Q7L3S4 317 aaPredicted RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 SKIDA1Q1XH10 827 aa9.97□□□□□ -0.81
ABCA13-207ENST00000544596 IKQ13123 557 aaPredicted RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
ABCA13-207ENST00000544596 RUFY1Q96T51 708 aa9.97□□□□□ -0.81
ABCA13-207ENST00000544596 CPLX1O14810 134 aa9.96□□□□□ -0.81
ABCA13-207ENST00000544596 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.81
ABCA13-207ENST00000544596 HOMER1Q86YM7 354 aa9.96□□□□□ -0.81
ABCA13-207ENST00000544596 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.81
ABCA13-207ENST00000544596 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.81
ABCA13-207ENST00000544596 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.82
ABCA13-207ENST00000544596 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
ABCA13-207ENST00000544596 ERCC6Q03468 1493 aa9.96□□□□□ -0.82
ABCA13-207ENST00000544596 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
ABCA13-207ENST00000544596 EPS15P42566 896 aa9.95□□□□□ -0.82
ABCA13-207ENST00000544596 PPM1FP49593 454 aaPredicted RBP9.95□□□□□ -0.82
ABCA13-207ENST00000544596 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
ABCA13-207ENST00000544596 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
ABCA13-207ENST00000544596 KDM4AO75164 1064 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 ERICH2A1L162 156 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 OFD1O75665 1012 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 DIAPH3Q9NSV4 1193 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
ABCA13-207ENST00000544596 TRDNQ13061 729 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 IBSPP21815 317 aaPredicted RBP9.93□□□□□ -0.82
ABCA13-207ENST00000544596 CDR1P51861 262 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
ABCA13-207ENST00000544596 NEXNQ0ZGT2 675 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 C9orf78Q9NZ63 289 aaPredicted RBP9.93□□□□□ -0.82
ABCA13-207ENST00000544596 PLCD4Q9BRC7 762 aa9.93□□□□□ -0.82
ABCA13-207ENST00000544596 TEFQ10587 303 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 FOXD1Q16676 465 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 DDX49Q9Y6V7 483 aaKnown RBP9.92□□□□□ -0.82
ABCA13-207ENST00000544596 ANO2Q9NQ90 1003 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 LMOD3Q0VAK6 560 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 BICD2Q8TD16 824 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 AK7Q96M32 723 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 ANKRD45Q5TZF3 282 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 CHMP4CQ96CF2 233 aa9.92□□□□□ -0.82
ABCA13-207ENST00000544596 RRP7AQ9Y3A4 280 aaKnown RBP9.92□□□□□ -0.82
ABCA13-207ENST00000544596 HOOK1Q9UJC3 728 aaKnown RBP9.91□□□□□ -0.82
ABCA13-207ENST00000544596 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
ABCA13-207ENST00000544596 ATP6V1DQ9Y5K8 247 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms