RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 FGD6Q6ZV73 1430 aa33.4■■■□□ 2.94
PSME3-204ENST00000543428 CAMSAP1Q5T5Y3 1602 aa33.39■■■□□ 2.94
PSME3-204ENST00000543428 NCOA1Q15788 1441 aa33.39■■■□□ 2.94
PSME3-204ENST00000543428 PTPRTO14522 1441 aa33.37■■■□□ 2.93
PSME3-204ENST00000543428 ZNF142P52746 1687 aaPredicted RBP33.37■■■□□ 2.93
PSME3-204ENST00000543428 CERKQ8TCT0 537 aa33.37■■■□□ 2.93
PSME3-204ENST00000543428 CEP170BQ9Y4F5 1589 aaPredicted RBP33.36■■■□□ 2.93
PSME3-204ENST00000543428 ABCC5O15440 1437 aa33.36■■■□□ 2.93
PSME3-204ENST00000543428 EIF2AK4Q9P2K8 1649 aaKnown RBP33.35■■■□□ 2.93
PSME3-204ENST00000543428 CROCC2H7BZ55 1655 aa33.35■■■□□ 2.93
PSME3-204ENST00000543428 DUOX2Q9NRD8 1548 aa33.34■■■□□ 2.93
PSME3-204ENST00000543428 PZPP20742 1482 aa33.34■■■□□ 2.93
PSME3-204ENST00000543428 SHANK2Q9UPX8 1470 aa33.34■■■□□ 2.93
PSME3-204ENST00000543428 RNF17Q9BXT8 1623 aaKnown RBP33.34■■■□□ 2.93
PSME3-204ENST00000543428 FBXO31Q5XUX0 539 aaPredicted RBP33.33■■■□□ 2.93
PSME3-204ENST00000543428 TCOF1Q13428 1488 aaKnown RBP33.32■■■□□ 2.92
PSME3-204ENST00000543428 TNRQ92752 1358 aa33.32■■■□□ 2.92
PSME3-204ENST00000543428 DAPK1P53355 1430 aa33.31■■■□□ 2.92
PSME3-204ENST00000543428 KIF15Q9NS87 1388 aa33.31■■■□□ 2.92
PSME3-204ENST00000543428 RRP7BPQ9NSQ0 103 aa33.3■■■□□ 2.92
PSME3-204ENST00000543428 DNMT1P26358 1616 aaKnown RBP33.3■■■□□ 2.92
PSME3-204ENST00000543428 NCKAP5LQ9HCH0 1330 aa33.28■■■□□ 2.92
PSME3-204ENST00000543428 A2ML1A8K2U0 1454 aa33.28■■■□□ 2.92
PSME3-204ENST00000543428 ZC3H13Q5T200 1668 aaKnown RBP33.26■■■□□ 2.91
PSME3-204ENST00000543428 PLA2R1Q13018 1463 aa33.25■■■□□ 2.91
PSME3-204ENST00000543428 ABCC3O15438 1527 aa33.25■■■□□ 2.91
PSME3-204ENST00000543428 PKD2Q13563 968 aa33.24■■■□□ 2.91
PSME3-204ENST00000543428 CHIC2Q9UKJ5 165 aa33.24■■■□□ 2.91
PSME3-204ENST00000543428 FAM50AQ14320 339 aaKnown RBP33.23■■■□□ 2.91
PSME3-204ENST00000543428 ANKRD30AQ9BXX3 1397 aa33.21■■■□□ 2.91
PSME3-204ENST00000543428 ERBINQ96RT1 1412 aa33.21■■■□□ 2.91
PSME3-204ENST00000543428 MROH1Q8NDA8 1641 aa33.2■■■□□ 2.91
PSME3-204ENST00000543428 CEP152O94986 1710 aa33.17■■■□□ 2.9
PSME3-204ENST00000543428 NLRP1Q9C000 1473 aa33.16■■■□□ 2.9
PSME3-204ENST00000543428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.15■■■□□ 2.92e-7■■■□□ 16.9
PSME3-204ENST00000543428 PRDM15P57071 1507 aaPredicted RBP33.12■■■□□ 2.89
PSME3-204ENST00000543428 THEMISQ8N1K5 641 aaPredicted RBP33.11■■■□□ 2.89
PSME3-204ENST00000543428 KANK1Q14678 1352 aa33.1■■■□□ 2.89
PSME3-204ENST00000543428 CFAP65Q6ZU64 1925 aaKnown RBP33.1■■■□□ 2.89
PSME3-204ENST00000543428 SPATA31D1Q6ZQQ2 1576 aa33.09■■■□□ 2.89
PSME3-204ENST00000543428 ERVK-7P63135 1459 aa33.09■■■□□ 2.89
PSME3-204ENST00000543428 UGGT1Q9NYU2 1555 aa33.09■■■□□ 2.89
PSME3-204ENST00000543428 LTBP4Q8N2S1 1624 aa33.08■■■□□ 2.89
PSME3-204ENST00000543428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.06■■■□□ 2.88
PSME3-204ENST00000543428 DEPDC5O75140 1603 aa33.06■■■□□ 2.88
PSME3-204ENST00000543428 POLR1AO95602 1720 aaPredicted RBP33.05■■■□□ 2.88
PSME3-204ENST00000543428 ANKLE2Q86XL3 938 aa33.05■■■□□ 2.88
PSME3-204ENST00000543428 ADGRL2O95490 1459 aa33.05■■■□□ 2.88
PSME3-204ENST00000543428 ZNF335Q9H4Z2 1342 aaPredicted RBP33.04■■■□□ 2.88
PSME3-204ENST00000543428 ARHGAP31Q2M1Z3 1444 aa33.01■■■□□ 2.87
PSME3-204ENST00000543428 PPARGC1BQ86YN6 1023 aaKnown RBP33■■■□□ 2.87
PSME3-204ENST00000543428 NEURL4Q96JN8 1562 aa32.96■■■□□ 2.87
PSME3-204ENST00000543428 IQSEC2Q5JU85 1478 aa32.96■■■□□ 2.87
PSME3-204ENST00000543428 ANKRD50Q9ULJ7 1429 aa32.94■■■□□ 2.86
PSME3-204ENST00000543428 LMTK2Q8IWU2 1503 aa32.92■■■□□ 2.86
PSME3-204ENST00000543428 VWDEQ8N2E2 1590 aa32.91■■■□□ 2.86
PSME3-204ENST00000543428 NPHP4O75161 1426 aaPredicted RBP32.9■■■□□ 2.86
PSME3-204ENST00000543428 UBR1Q8IWV7 1749 aa32.88■■■□□ 2.85
PSME3-204ENST00000543428 ITGAEP38570 1179 aa32.87■■■□□ 2.85
PSME3-204ENST00000543428 MED14O60244 1454 aa32.86■■■□□ 2.85
PSME3-204ENST00000543428 STAG3Q9UJ98 1225 aa32.85■■■□□ 2.85
PSME3-204ENST00000543428 EFCAB6Q5THR3 1501 aa32.83■■■□□ 2.85
PSME3-204ENST00000543428 IQGAP1P46940 1657 aa32.83■■■□□ 2.85
PSME3-204ENST00000543428 ROCK1Q13464 1354 aa32.83■■■□□ 2.85
PSME3-204ENST00000543428 PIK3C2BO00750 1634 aa32.8■■■□□ 2.84
PSME3-204ENST00000543428 CPS1P31327 1500 aa32.78■■■□□ 2.84
PSME3-204ENST00000543428 UBAP1LF5GYI3 381 aa32.78■■■□□ 2.84
PSME3-204ENST00000543428 TXNDC2Q86VQ3 553 aa32.77■■■□□ 2.84
PSME3-204ENST00000543428 EID1Q9Y6B2 187 aa32.77■■■□□ 2.84
PSME3-204ENST00000543428 SCAF11Q99590 1463 aaKnown RBP32.77■■■□□ 2.84
PSME3-204ENST00000543428 IDI1Q13907 227 aa32.75■■■□□ 2.83
PSME3-204ENST00000543428 SLIT1O75093 1534 aa32.75■■■□□ 2.83
PSME3-204ENST00000543428 SYNMO15061 1565 aa32.75■■■□□ 2.83
PSME3-204ENST00000543428 NOS1P29475 1434 aa32.74■■■□□ 2.83
PSME3-204ENST00000543428 ARHGAP23Q9P227 1491 aa32.74■■■□□ 2.83
PSME3-204ENST00000543428 UNC13BO14795 1591 aa32.73■■■□□ 2.83
PSME3-204ENST00000543428 RPRD2Q5VT52 1461 aaKnown RBP32.73■■■□□ 2.83
PSME3-204ENST00000543428 TET3O43151 1660 aa32.72■■■□□ 2.83
PSME3-204ENST00000543428 LTKP29376 864 aa32.72■■■□□ 2.83
PSME3-204ENST00000543428 TMEM2Q9UHN6 1383 aa32.7■■■□□ 2.83
PSME3-204ENST00000543428 KDM5AP29375 1690 aaKnown RBP32.69■■■□□ 2.82
PSME3-204ENST00000543428 SLC52A1Q9NWF4 448 aa32.69■■■□□ 2.82
PSME3-204ENST00000543428 GCC2Q8IWJ2 1684 aa32.68■■■□□ 2.82
PSME3-204ENST00000543428 ADGRB3O60242 1522 aa32.64■■■□□ 2.82
PSME3-204ENST00000543428 NUP155O75694 1391 aa32.62■■■□□ 2.81
PSME3-204ENST00000543428 RRBP1Q9P2E9 1410 aaKnown RBP32.61■■■□□ 2.81
PSME3-204ENST00000543428 IQGAP3Q86VI3 1631 aa32.61■■■□□ 2.81
PSME3-204ENST00000543428 SCAF1Q9H7N4 1312 aaKnown RBP32.6■■■□□ 2.81
PSME3-204ENST00000543428 TOM1O60784 492 aa32.6■■■□□ 2.81
PSME3-204ENST00000543428 STRCP1A6NGW2 1772 aa32.58■■■□□ 2.81
PSME3-204ENST00000543428 E9PCH4 1651 aa32.57■■■□□ 2.8
PSME3-204ENST00000543428 PIP4K2BP78356 416 aa32.56■■■□□ 2.8
PSME3-204ENST00000543428 LRRC7Q96NW7 1537 aa32.53■■■□□ 2.8
PSME3-204ENST00000543428 CHGAP10645 457 aaKnown RBP32.53■■■□□ 2.8
PSME3-204ENST00000543428 BCANQ96GW7 911 aa32.53■■■□□ 2.8
PSME3-204ENST00000543428 MYO5BQ9ULV0 1848 aa32.5■■■□□ 2.79
PSME3-204ENST00000543428 HDGFP51858 240 aaKnown RBP32.49■■■□□ 2.79
PSME3-204ENST00000543428 PPP1R15AO75807 674 aaPredicted RBP32.48■■■□□ 2.79
PSME3-204ENST00000543428 SLC26A8Q96RN1 970 aa32.48■■■□□ 2.79
PSME3-204ENST00000543428 TMEM131LA2VDJ0 1609 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms