RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
PRAME-214ENST00000543184 SPAG9O60271 1321 aaKnown RBP19.33■□□□□ 0.69
PRAME-214ENST00000543184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.685e-17■■□□□ 11.4
PRAME-214ENST00000543184 NCOA1Q15788 1441 aa19.33■□□□□ 0.68
PRAME-214ENST00000543184 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
PRAME-214ENST00000543184 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
PRAME-214ENST00000543184 KIF13AQ9H1H9 1805 aa19.29■□□□□ 0.68
PRAME-214ENST00000543184 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
PRAME-214ENST00000543184 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
PRAME-214ENST00000543184 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
PRAME-214ENST00000543184 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
PRAME-214ENST00000543184 ERICH6BQ5W0A0 696 aa19.27■□□□□ 0.68
PRAME-214ENST00000543184 ABCC1P33527 1531 aa19.27■□□□□ 0.68
PRAME-214ENST00000543184 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.67
PRAME-214ENST00000543184 KIF15Q9NS87 1388 aa19.26■□□□□ 0.67
PRAME-214ENST00000543184 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
PRAME-214ENST00000543184 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
PRAME-214ENST00000543184 MLECQ14165 292 aa19.23■□□□□ 0.67
PRAME-214ENST00000543184 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
PRAME-214ENST00000543184 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
PRAME-214ENST00000543184 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
PRAME-214ENST00000543184 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
PRAME-214ENST00000543184 GLI2P10070 1586 aa19.21■□□□□ 0.67
PRAME-214ENST00000543184 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
PRAME-214ENST00000543184 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
PRAME-214ENST00000543184 KIF3BO15066 747 aa19.2■□□□□ 0.66
PRAME-214ENST00000543184 GGT6Q6P531 493 aa19.2■□□□□ 0.66
PRAME-214ENST00000543184 PPRC1Q5VV67 1664 aaKnown RBP19.19■□□□□ 0.66
PRAME-214ENST00000543184 RSPH4AQ5TD94 716 aa19.19■□□□□ 0.66
PRAME-214ENST00000543184 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
PRAME-214ENST00000543184 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
PRAME-214ENST00000543184 PLEKHH2Q8IVE3 1493 aa19.18■□□□□ 0.66
PRAME-214ENST00000543184 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
PRAME-214ENST00000543184 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
PRAME-214ENST00000543184 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
PRAME-214ENST00000543184 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
PRAME-214ENST00000543184 TEX14Q8IWB6 1497 aa19.17■□□□□ 0.66
PRAME-214ENST00000543184 NEO1Q92859 1461 aa19.16■□□□□ 0.66
PRAME-214ENST00000543184 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
PRAME-214ENST00000543184 DHX29Q7Z478 1369 aaKnown RBP19.15■□□□□ 0.66
PRAME-214ENST00000543184 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
PRAME-214ENST00000543184 PRKCSHP14314 528 aaPredicted RBP19.15■□□□□ 0.66
PRAME-214ENST00000543184 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
PRAME-214ENST00000543184 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
PRAME-214ENST00000543184 ARID4BQ4LE39 1312 aaPredicted RBP19.14■□□□□ 0.65
PRAME-214ENST00000543184 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
PRAME-214ENST00000543184 SKAP1Q86WV1 359 aa19.12■□□□□ 0.65
PRAME-214ENST00000543184 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
PRAME-214ENST00000543184 USP47Q96K76 1375 aa19.12■□□□□ 0.65
PRAME-214ENST00000543184 NUP155O75694 1391 aa19.11■□□□□ 0.65
PRAME-214ENST00000543184 ANP32AP39687 249 aaKnown RBP19.11■□□□□ 0.65
PRAME-214ENST00000543184 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
PRAME-214ENST00000543184 ROCK1Q13464 1354 aa19.1■□□□□ 0.65
PRAME-214ENST00000543184 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
PRAME-214ENST00000543184 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
PRAME-214ENST00000543184 PKD2Q13563 968 aa19.1■□□□□ 0.65
PRAME-214ENST00000543184 PNISRQ8TF01 805 aaKnown RBP19.1■□□□□ 0.65
PRAME-214ENST00000543184 IPO9Q96P70 1041 aaKnown RBP19.09■□□□□ 0.65
PRAME-214ENST00000543184 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
PRAME-214ENST00000543184 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
PRAME-214ENST00000543184 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
PRAME-214ENST00000543184 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
PRAME-214ENST00000543184 LAS1LQ9Y4W2 734 aaKnown RBP19.06■□□□□ 0.64
PRAME-214ENST00000543184 FRMPD1Q5SYB0 1578 aa19.06■□□□□ 0.64
PRAME-214ENST00000543184 ADGRL2O95490 1459 aa19.06■□□□□ 0.64
PRAME-214ENST00000543184 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
PRAME-214ENST00000543184 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
PRAME-214ENST00000543184 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
PRAME-214ENST00000543184 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
PRAME-214ENST00000543184 RNF123Q5XPI4 1314 aa19.03■□□□□ 0.64
PRAME-214ENST00000543184 RICTORQ6R327 1708 aa19.02■□□□□ 0.64
PRAME-214ENST00000543184 PZPP20742 1482 aa19.02■□□□□ 0.64
PRAME-214ENST00000543184 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.63
PRAME-214ENST00000543184 PLIN1O60240 522 aa19.01■□□□□ 0.63
PRAME-214ENST00000543184 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
PRAME-214ENST00000543184 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
PRAME-214ENST00000543184 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
PRAME-214ENST00000543184 A2MP01023 1474 aa19■□□□□ 0.63
PRAME-214ENST00000543184 KDM5CP41229 1560 aa19■□□□□ 0.63
PRAME-214ENST00000543184 ABCA6Q8N139 1617 aa19■□□□□ 0.63
PRAME-214ENST00000543184 ADGBQ8N7X0 1667 aa19■□□□□ 0.63
PRAME-214ENST00000543184 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
PRAME-214ENST00000543184 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
PRAME-214ENST00000543184 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
PRAME-214ENST00000543184 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
PRAME-214ENST00000543184 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
PRAME-214ENST00000543184 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
PRAME-214ENST00000543184 IL27Q8NEV9 243 aa18.97■□□□□ 0.63
PRAME-214ENST00000543184 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
PRAME-214ENST00000543184 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
PRAME-214ENST00000543184 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
PRAME-214ENST00000543184 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
PRAME-214ENST00000543184 MAST1Q9Y2H9 1570 aa18.95■□□□□ 0.62
PRAME-214ENST00000543184 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
PRAME-214ENST00000543184 PDE4AP27815 886 aa18.93■□□□□ 0.62
PRAME-214ENST00000543184 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
PRAME-214ENST00000543184 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
PRAME-214ENST00000543184 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
PRAME-214ENST00000543184 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
PRAME-214ENST00000543184 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms