RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 RNF17Q9BXT8 1623 aaKnown RBP31.18■■■□□ 2.58
OTUB1-211ENST00000543004 DEPDC5O75140 1603 aa31.17■■■□□ 2.58
OTUB1-211ENST00000543004 RAB3GAP2Q9H2M9 1393 aa31.15■■■□□ 2.58
OTUB1-211ENST00000543004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.14■■■□□ 2.587e-7■□□□□ 11.3
OTUB1-211ENST00000543004 UNC13BO14795 1591 aa31.12■■■□□ 2.57
OTUB1-211ENST00000543004 PRDM15P57071 1507 aaPredicted RBP31.1■■■□□ 2.57
OTUB1-211ENST00000543004 ADAMTSL3P82987 1691 aa31.08■■■□□ 2.57
OTUB1-211ENST00000543004 FER1L4A9Z1Z3 1794 aa31.07■■■□□ 2.56
OTUB1-211ENST00000543004 CEP152O94986 1710 aa31.07■■■□□ 2.56
OTUB1-211ENST00000543004 MADDQ8WXG6 1647 aa31.06■■■□□ 2.56
OTUB1-211ENST00000543004 CLTCQ00610 1675 aaKnown RBP31.05■■■□□ 2.56
OTUB1-211ENST00000543004 VWDEQ8N2E2 1590 aa31.03■■■□□ 2.56
OTUB1-211ENST00000543004 TRIM52Q96A61 297 aa31.02■■■□□ 2.56
OTUB1-211ENST00000543004 NUP155O75694 1391 aa31.02■■■□□ 2.56
OTUB1-211ENST00000543004 RIMS1Q86UR5 1692 aaKnown RBP31■■■□□ 2.55
OTUB1-211ENST00000543004 ABCC3O15438 1527 aa31■■■□□ 2.55
OTUB1-211ENST00000543004 WASHC2CQ9Y4E1 1318 aa31■■■□□ 2.55
OTUB1-211ENST00000543004 IQGAP3Q86VI3 1631 aa31■■■□□ 2.55
OTUB1-211ENST00000543004 KDM5DQ9BY66 1539 aa31■■■□□ 2.55
OTUB1-211ENST00000543004 KANK1Q14678 1352 aa30.98■■■□□ 2.55
OTUB1-211ENST00000543004 KDM4FA0A1W2PPD8 638 aa30.98■■■□□ 2.55
OTUB1-211ENST00000543004 ZC3H13Q5T200 1668 aaKnown RBP30.97■■■□□ 2.55
OTUB1-211ENST00000543004 FAM135AQ9P2D6 1515 aa30.96■■■□□ 2.55
OTUB1-211ENST00000543004 PZPP20742 1482 aa30.94■■■□□ 2.54
OTUB1-211ENST00000543004 ESF1Q9H501 851 aaKnown RBP30.94■■■□□ 2.54
OTUB1-211ENST00000543004 PPP6R1Q9UPN7 881 aa30.94■■■□□ 2.54
OTUB1-211ENST00000543004 CAMSAP1Q5T5Y3 1602 aa30.94■■■□□ 2.54
OTUB1-211ENST00000543004 HRCP23327 699 aa30.93■■■□□ 2.54
OTUB1-211ENST00000543004 LMTK2Q8IWU2 1503 aa30.91■■■□□ 2.54
OTUB1-211ENST00000543004 MROH2AA6NES4 1674 aa30.9■■■□□ 2.54
OTUB1-211ENST00000543004 TET3O43151 1660 aa30.9■■■□□ 2.54
OTUB1-211ENST00000543004 CFAP65Q6ZU64 1925 aaKnown RBP30.9■■■□□ 2.54
OTUB1-211ENST00000543004 C3P01024 1663 aa30.88■■■□□ 2.53
OTUB1-211ENST00000543004 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
OTUB1-211ENST00000543004 CNTLNQ9NXG0 1405 aa30.88■■■□□ 2.53
OTUB1-211ENST00000543004 ZMYM3Q14202 1370 aa30.87■■■□□ 2.53
OTUB1-211ENST00000543004 CEBPAP49715 358 aaPredicted RBP30.87■■■□□ 2.53
OTUB1-211ENST00000543004 EFCAB6Q5THR3 1501 aa30.86■■■□□ 2.53
OTUB1-211ENST00000543004 E9PCH4 1651 aa30.86■■■□□ 2.53
OTUB1-211ENST00000543004 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
OTUB1-211ENST00000543004 MPHOSPH9Q99550 1183 aa30.84■■■□□ 2.53
OTUB1-211ENST00000543004 PTPRMP28827 1452 aa30.83■■■□□ 2.53
OTUB1-211ENST00000543004 NPATQ14207 1427 aa30.82■■■□□ 2.52
OTUB1-211ENST00000543004 PKD2Q13563 968 aa30.8■■■□□ 2.52
OTUB1-211ENST00000543004 FOXD1Q16676 465 aa30.8■■■□□ 2.52
OTUB1-211ENST00000543004 FBXO31Q5XUX0 539 aaPredicted RBP30.8■■■□□ 2.52
OTUB1-211ENST00000543004 ACIN1Q9UKV3 1341 aaKnown RBP30.79■■■□□ 2.52
OTUB1-211ENST00000543004 ARHGAP31Q2M1Z3 1444 aa30.77■■■□□ 2.52
OTUB1-211ENST00000543004 PREX1Q8TCU6 1659 aa30.75■■■□□ 2.51
OTUB1-211ENST00000543004 RPRD2Q5VT52 1461 aaKnown RBP30.7■■■□□ 2.51
OTUB1-211ENST00000543004 DHX57Q6P158 1386 aaKnown RBP30.7■■■□□ 2.51
OTUB1-211ENST00000543004 ERVK-7P63135 1459 aa30.7■■■□□ 2.5
OTUB1-211ENST00000543004 SPHKAPQ2M3C7 1700 aa30.68■■■□□ 2.5
OTUB1-211ENST00000543004 SPATA31D1Q6ZQQ2 1576 aa30.67■■■□□ 2.5
OTUB1-211ENST00000543004 SYNMO15061 1565 aa30.66■■■□□ 2.5
OTUB1-211ENST00000543004 NOS1P29475 1434 aa30.64■■■□□ 2.5
OTUB1-211ENST00000543004 PLA2R1Q13018 1463 aa30.64■■■□□ 2.5
OTUB1-211ENST00000543004 UGGT1Q9NYU2 1555 aa30.62■■■□□ 2.49
OTUB1-211ENST00000543004 PTPRTO14522 1441 aa30.61■■■□□ 2.49
OTUB1-211ENST00000543004 TNRQ92752 1358 aa30.59■■■□□ 2.49
OTUB1-211ENST00000543004 TRPM2O94759 1503 aa30.57■■■□□ 2.48
OTUB1-211ENST00000543004 MYO3AQ8NEV4 1616 aa30.56■■■□□ 2.48
OTUB1-211ENST00000543004 SETD1BQ9UPS6 1966 aaKnown RBP30.56■■■□□ 2.48
OTUB1-211ENST00000543004 ANKRD30BQ9BXX2 1392 aa30.55■■■□□ 2.48
OTUB1-211ENST00000543004 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
OTUB1-211ENST00000543004 PIK3C2BO00750 1634 aa30.53■■■□□ 2.48
OTUB1-211ENST00000543004 IDI1Q13907 227 aa30.51■■■□□ 2.48
OTUB1-211ENST00000543004 MYO5BQ9ULV0 1848 aa30.46■■■□□ 2.47
OTUB1-211ENST00000543004 CCDC144AA2RUR9 1427 aa30.45■■■□□ 2.47
OTUB1-211ENST00000543004 SLC52A1Q9NWF4 448 aa30.45■■■□□ 2.47
OTUB1-211ENST00000543004 NLRP1Q9C000 1473 aa30.45■■■□□ 2.46
OTUB1-211ENST00000543004 CEP170BQ9Y4F5 1589 aaPredicted RBP30.44■■■□□ 2.46
OTUB1-211ENST00000543004 CCER1Q8TC90 406 aaPredicted RBP30.44■■■□□ 2.46
OTUB1-211ENST00000543004 ZNF142P52746 1687 aaPredicted RBP30.43■■■□□ 2.46
OTUB1-211ENST00000543004 SIN3AQ96ST3 1273 aa30.43■■■□□ 2.46
OTUB1-211ENST00000543004 UHRF1BP1Q6BDS2 1440 aa30.43■■■□□ 2.46
OTUB1-211ENST00000543004 UBR1Q8IWV7 1749 aa30.42■■■□□ 2.46
OTUB1-211ENST00000543004 KIF1BO60333 1816 aa30.42■■■□□ 2.46
OTUB1-211ENST00000543004 A2ML1A8K2U0 1454 aa30.4■■■□□ 2.46
OTUB1-211ENST00000543004 TMEM131LA2VDJ0 1609 aa30.4■■■□□ 2.46
OTUB1-211ENST00000543004 CHGAP10645 457 aaKnown RBP30.4■■■□□ 2.46
OTUB1-211ENST00000543004 ADGRB3O60242 1522 aa30.38■■■□□ 2.45
OTUB1-211ENST00000543004 LMTK3Q96Q04 1460 aa30.37■■■□□ 2.45
OTUB1-211ENST00000543004 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
OTUB1-211ENST00000543004 STAG3Q9UJ98 1225 aa30.35■■■□□ 2.45
OTUB1-211ENST00000543004 NEUROD1Q13562 356 aa30.34■■■□□ 2.45
OTUB1-211ENST00000543004 KDM5AP29375 1690 aaKnown RBP30.33■■■□□ 2.45
OTUB1-211ENST00000543004 SPATA31E1Q6ZUB1 1445 aa30.31■■■□□ 2.44
OTUB1-211ENST00000543004 HSPA2P54652 639 aa30.3■■■□□ 2.44
OTUB1-211ENST00000543004 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
OTUB1-211ENST00000543004 ZNF326Q5BKZ1 582 aaKnown RBP30.25■■■□□ 2.43
OTUB1-211ENST00000543004 THEMISQ8N1K5 641 aaPredicted RBP30.25■■■□□ 2.43
OTUB1-211ENST00000543004 CLSPNQ9HAW4 1339 aa30.24■■■□□ 2.43
OTUB1-211ENST00000543004 NUTM2DQ5VT03 806 aaPredicted RBP30.22■■■□□ 2.43
OTUB1-211ENST00000543004 NEURL4Q96JN8 1562 aa30.21■■■□□ 2.43
OTUB1-211ENST00000543004 TMEM2Q9UHN6 1383 aa30.21■■■□□ 2.43
OTUB1-211ENST00000543004 SLIT1O75093 1534 aa30.2■■■□□ 2.42
OTUB1-211ENST00000543004 NEXMIFQ5QGS0 1516 aa30.2■■■□□ 2.42
OTUB1-211ENST00000543004 PPLO60437 1756 aa30.19■■■□□ 2.42
OTUB1-211ENST00000543004 IFT172Q9UG01 1749 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms