RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
DDX11-222ENST00000542777 WASHC2CQ9Y4E1 1318 aa25.39■■□□□ 1.66
DDX11-222ENST00000542777 FBXO31Q5XUX0 539 aaPredicted RBP25.39■■□□□ 1.66
DDX11-222ENST00000542777 MAP3K1Q13233 1512 aa25.38■■□□□ 1.65
DDX11-222ENST00000542777 KDM5DQ9BY66 1539 aa25.38■■□□□ 1.65
DDX11-222ENST00000542777 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
DDX11-222ENST00000542777 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
DDX11-222ENST00000542777 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
DDX11-222ENST00000542777 IQSEC2Q5JU85 1478 aa25.35■■□□□ 1.65
DDX11-222ENST00000542777 TNRQ92752 1358 aa25.35■■□□□ 1.65
DDX11-222ENST00000542777 DNMT1P26358 1616 aaKnown RBP25.35■■□□□ 1.65
DDX11-222ENST00000542777 ZNF335Q9H4Z2 1342 aaPredicted RBP25.35■■□□□ 1.65
DDX11-222ENST00000542777 PZPP20742 1482 aa25.34■■□□□ 1.65
DDX11-222ENST00000542777 MAST1Q9Y2H9 1570 aa25.32■■□□□ 1.64
DDX11-222ENST00000542777 MYOM3Q5VTT5 1437 aa25.31■■□□□ 1.64
DDX11-222ENST00000542777 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
DDX11-222ENST00000542777 RNF17Q9BXT8 1623 aaKnown RBP25.26■■□□□ 1.63
DDX11-222ENST00000542777 APLP2Q06481 763 aa25.25■■□□□ 1.63
DDX11-222ENST00000542777 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
DDX11-222ENST00000542777 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
DDX11-222ENST00000542777 THEMISQ8N1K5 641 aaPredicted RBP25.23■■□□□ 1.63
DDX11-222ENST00000542777 NLRP1Q9C000 1473 aa25.22■■□□□ 1.63
DDX11-222ENST00000542777 ABCC3O15438 1527 aa25.22■■□□□ 1.63
DDX11-222ENST00000542777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.21■■□□□ 1.63
DDX11-222ENST00000542777 ANKLE2Q86XL3 938 aa25.21■■□□□ 1.63
DDX11-222ENST00000542777 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.63
DDX11-222ENST00000542777 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
DDX11-222ENST00000542777 NEURL4Q96JN8 1562 aa25.19■■□□□ 1.62
DDX11-222ENST00000542777 UGGT1Q9NYU2 1555 aa25.19■■□□□ 1.62
DDX11-222ENST00000542777 DISP3Q9P2K9 1392 aa25.18■■□□□ 1.62
DDX11-222ENST00000542777 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
DDX11-222ENST00000542777 MROH1Q8NDA8 1641 aa25.16■■□□□ 1.62
DDX11-222ENST00000542777 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
DDX11-222ENST00000542777 SPATA31D1Q6ZQQ2 1576 aa25.15■■□□□ 1.62
DDX11-222ENST00000542777 ABCC5O15440 1437 aa25.15■■□□□ 1.62
DDX11-222ENST00000542777 CEP152O94986 1710 aa25.15■■□□□ 1.62
DDX11-222ENST00000542777 RRP7BPQ9NSQ0 103 aa25.13■■□□□ 1.61
DDX11-222ENST00000542777 CFAP65Q6ZU64 1925 aaKnown RBP25.13■■□□□ 1.61
DDX11-222ENST00000542777 KIF15Q9NS87 1388 aa25.13■■□□□ 1.61
DDX11-222ENST00000542777 ERVK-7P63135 1459 aa25.13■■□□□ 1.61
DDX11-222ENST00000542777 SHANK2Q9UPX8 1470 aa25.12■■□□□ 1.61
DDX11-222ENST00000542777 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
DDX11-222ENST00000542777 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
DDX11-222ENST00000542777 NPHP4O75161 1426 aaPredicted RBP25.11■■□□□ 1.61
DDX11-222ENST00000542777 MED14O60244 1454 aa25.1■■□□□ 1.61
DDX11-222ENST00000542777 CPS1P31327 1500 aa25.1■■□□□ 1.61
DDX11-222ENST00000542777 DAPK1P53355 1430 aa25.09■■□□□ 1.61
DDX11-222ENST00000542777 FGD6Q6ZV73 1430 aa25.08■■□□□ 1.61
DDX11-222ENST00000542777 ERBINQ96RT1 1412 aa25.08■■□□□ 1.61
DDX11-222ENST00000542777 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
DDX11-222ENST00000542777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
DDX11-222ENST00000542777 VWDEQ8N2E2 1590 aa25.05■■□□□ 1.6
DDX11-222ENST00000542777 PRDM15P57071 1507 aaPredicted RBP25.05■■□□□ 1.6
DDX11-222ENST00000542777 CHIC2Q9UKJ5 165 aa25.04■■□□□ 1.6
DDX11-222ENST00000542777 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
DDX11-222ENST00000542777 ARHGAP31Q2M1Z3 1444 aa25.03■■□□□ 1.6
DDX11-222ENST00000542777 TOM1O60784 492 aa25.02■■□□□ 1.6
DDX11-222ENST00000542777 UBR1Q8IWV7 1749 aa25.02■■□□□ 1.6
DDX11-222ENST00000542777 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
DDX11-222ENST00000542777 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
DDX11-222ENST00000542777 PIP4K2BP78356 416 aa25■■□□□ 1.59
DDX11-222ENST00000542777 KANK1Q14678 1352 aa25■■□□□ 1.59
DDX11-222ENST00000542777 LTKP29376 864 aa24.94■■□□□ 1.58
DDX11-222ENST00000542777 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
DDX11-222ENST00000542777 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
DDX11-222ENST00000542777 STRCP1A6NGW2 1772 aa24.93■■□□□ 1.58
DDX11-222ENST00000542777 HSPA1LP34931 641 aa24.93■■□□□ 1.58
DDX11-222ENST00000542777 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
DDX11-222ENST00000542777 ARHGAP23Q9P227 1491 aa24.93■■□□□ 1.58
DDX11-222ENST00000542777 SLIT1O75093 1534 aa24.92■■□□□ 1.58
DDX11-222ENST00000542777 STAG3Q9UJ98 1225 aa24.91■■□□□ 1.58
DDX11-222ENST00000542777 EID1Q9Y6B2 187 aa24.91■■□□□ 1.58
DDX11-222ENST00000542777 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
DDX11-222ENST00000542777 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
DDX11-222ENST00000542777 SOCS7O14512 581 aa24.9■■□□□ 1.58
DDX11-222ENST00000542777 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.57
DDX11-222ENST00000542777 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
DDX11-222ENST00000542777 IDI1Q13907 227 aa24.87■■□□□ 1.57
DDX11-222ENST00000542777 TMEM2Q9UHN6 1383 aa24.86■■□□□ 1.57
DDX11-222ENST00000542777 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
DDX11-222ENST00000542777 SYNMO15061 1565 aa24.85■■□□□ 1.57
DDX11-222ENST00000542777 EFCAB6Q5THR3 1501 aa24.82■■□□□ 1.56
DDX11-222ENST00000542777 KDM5AP29375 1690 aaKnown RBP24.82■■□□□ 1.56
DDX11-222ENST00000542777 NOS1P29475 1434 aa24.81■■□□□ 1.56
DDX11-222ENST00000542777 ANKRD50Q9ULJ7 1429 aa24.81■■□□□ 1.56
DDX11-222ENST00000542777 SLC52A1Q9NWF4 448 aa24.78■■□□□ 1.56
DDX11-222ENST00000542777 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
DDX11-222ENST00000542777 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
DDX11-222ENST00000542777 RPRD2Q5VT52 1461 aaKnown RBP24.74■■□□□ 1.55
DDX11-222ENST00000542777 ADGRB3O60242 1522 aa24.74■■□□□ 1.55
DDX11-222ENST00000542777 XIRP1Q702N8 1843 aaKnown RBP24.73■■□□□ 1.55
DDX11-222ENST00000542777 SLC26A8Q96RN1 970 aa24.72■■□□□ 1.55
DDX11-222ENST00000542777 KCNA6P17658 529 aa24.71■■□□□ 1.55
DDX11-222ENST00000542777 TET3O43151 1660 aa24.71■■□□□ 1.55
DDX11-222ENST00000542777 BCANQ96GW7 911 aa24.68■■□□□ 1.54
DDX11-222ENST00000542777 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
DDX11-222ENST00000542777 UNC13BO14795 1591 aa24.67■■□□□ 1.54
DDX11-222ENST00000542777 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
DDX11-222ENST00000542777 PROSER2Q86WR7 435 aaPredicted RBP24.66■■□□□ 1.54
DDX11-222ENST00000542777 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms