RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 FBXO31Q5XUX0 539 aaPredicted RBP30.57■■■□□ 2.48
RAP1B-227ENST00000542018 POLR1AO95602 1720 aaPredicted RBP30.55■■■□□ 2.48
RAP1B-227ENST00000542018 TNRQ92752 1358 aa30.52■■■□□ 2.48
RAP1B-227ENST00000542018 PZPP20742 1482 aa30.51■■■□□ 2.48
RAP1B-227ENST00000542018 KIF3BO15066 747 aa30.5■■■□□ 2.47
RAP1B-227ENST00000542018 KDM5DQ9BY66 1539 aa30.49■■■□□ 2.47
RAP1B-227ENST00000542018 CCDC141Q6ZP82 1450 aa30.48■■■□□ 2.47
RAP1B-227ENST00000542018 CAMSAP2Q08AD1 1489 aa30.47■■■□□ 2.47
RAP1B-227ENST00000542018 FAM135AQ9P2D6 1515 aa30.46■■■□□ 2.47
RAP1B-227ENST00000542018 NCOA2Q15596 1464 aa30.45■■■□□ 2.47
RAP1B-227ENST00000542018 SHANK2Q9UPX8 1470 aa30.45■■■□□ 2.47
RAP1B-227ENST00000542018 CPS1P31327 1500 aa30.44■■■□□ 2.46
RAP1B-227ENST00000542018 HSPA1LP34931 641 aa30.43■■■□□ 2.46
RAP1B-227ENST00000542018 VWDEQ8N2E2 1590 aa30.42■■■□□ 2.46
RAP1B-227ENST00000542018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.41■■■□□ 2.466e-8■□□□□ 11.2
RAP1B-227ENST00000542018 MIA2Q96PC5 1412 aa30.4■■■□□ 2.46
RAP1B-227ENST00000542018 WASHC2CQ9Y4E1 1318 aa30.4■■■□□ 2.46
RAP1B-227ENST00000542018 ALKQ9UM73 1620 aa30.39■■■□□ 2.46
RAP1B-227ENST00000542018 ARHGEF5Q12774 1597 aa30.37■■■□□ 2.45
RAP1B-227ENST00000542018 MED1Q15648 1581 aaPredicted RBP30.37■■■□□ 2.45
RAP1B-227ENST00000542018 PIP4K2BP78356 416 aa30.37■■■□□ 2.45
RAP1B-227ENST00000542018 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
RAP1B-227ENST00000542018 MED14O60244 1454 aa30.36■■■□□ 2.45
RAP1B-227ENST00000542018 NLRP1Q9C000 1473 aa30.36■■■□□ 2.45
RAP1B-227ENST00000542018 DEPDC5O75140 1603 aa30.36■■■□□ 2.45
RAP1B-227ENST00000542018 ANKLE2Q86XL3 938 aa30.35■■■□□ 2.45
RAP1B-227ENST00000542018 UGGT1Q9NYU2 1555 aa30.35■■■□□ 2.45
RAP1B-227ENST00000542018 SCAF1Q9H7N4 1312 aaKnown RBP30.34■■■□□ 2.45
RAP1B-227ENST00000542018 TOM1O60784 492 aa30.34■■■□□ 2.45
RAP1B-227ENST00000542018 THEMISQ8N1K5 641 aaPredicted RBP30.33■■■□□ 2.45
RAP1B-227ENST00000542018 NPHP4O75161 1426 aaPredicted RBP30.32■■■□□ 2.44
RAP1B-227ENST00000542018 RNF17Q9BXT8 1623 aaKnown RBP30.31■■■□□ 2.44
RAP1B-227ENST00000542018 STRCP1A6NGW2 1772 aa30.31■■■□□ 2.44
RAP1B-227ENST00000542018 IQGAP1P46940 1657 aa30.28■■■□□ 2.44
RAP1B-227ENST00000542018 ABCC3O15438 1527 aa30.27■■■□□ 2.44
RAP1B-227ENST00000542018 MROH1Q8NDA8 1641 aa30.25■■■□□ 2.43
RAP1B-227ENST00000542018 MAST1Q9Y2H9 1570 aa30.24■■■□□ 2.43
RAP1B-227ENST00000542018 TSPY4P0CV99 314 aa30.24■■■□□ 2.43
RAP1B-227ENST00000542018 TSPY10P0CW01 314 aa30.24■■■□□ 2.43
RAP1B-227ENST00000542018 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
RAP1B-227ENST00000542018 ERVK-7P63135 1459 aa30.2■■■□□ 2.43
RAP1B-227ENST00000542018 LRRC7Q96NW7 1537 aa30.2■■■□□ 2.42
RAP1B-227ENST00000542018 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
RAP1B-227ENST00000542018 EIF2AK4Q9P2K8 1649 aaKnown RBP30.18■■■□□ 2.42
RAP1B-227ENST00000542018 CFAP65Q6ZU64 1925 aaKnown RBP30.17■■■□□ 2.42
RAP1B-227ENST00000542018 CEP152O94986 1710 aa30.16■■■□□ 2.42
RAP1B-227ENST00000542018 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
RAP1B-227ENST00000542018 SYNMO15061 1565 aa30.12■■■□□ 2.41
RAP1B-227ENST00000542018 KANK4Q5T7N3 995 aaPredicted RBP30.1■■■□□ 2.41
RAP1B-227ENST00000542018 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
RAP1B-227ENST00000542018 ARHGAP23Q9P227 1491 aa30.06■■■□□ 2.4
RAP1B-227ENST00000542018 LTKP29376 864 aa30.06■■■□□ 2.4
RAP1B-227ENST00000542018 SCAF11Q99590 1463 aaKnown RBP30.06■■■□□ 2.4
RAP1B-227ENST00000542018 XIRP1Q702N8 1843 aaKnown RBP30.05■■■□□ 2.4
RAP1B-227ENST00000542018 MYOM3Q5VTT5 1437 aa30.05■■■□□ 2.4
RAP1B-227ENST00000542018 SENP3Q9H4L4 574 aaPredicted RBP30.04■■■□□ 2.4
RAP1B-227ENST00000542018 SLIT1O75093 1534 aa30.04■■■□□ 2.4
RAP1B-227ENST00000542018 DUOX2Q9NRD8 1548 aa30.04■■■□□ 2.4
RAP1B-227ENST00000542018 PHF23Q9BUL5 403 aaPredicted RBP30.01■■■□□ 2.39
RAP1B-227ENST00000542018 PRDM15P57071 1507 aaPredicted RBP30.01■■■□□ 2.39
RAP1B-227ENST00000542018 MAP3K1Q13233 1512 aa30.01■■■□□ 2.39
RAP1B-227ENST00000542018 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
RAP1B-227ENST00000542018 TXNDC2Q86VQ3 553 aa29.97■■■□□ 2.39
RAP1B-227ENST00000542018 CROCC2H7BZ55 1655 aa29.95■■■□□ 2.39
RAP1B-227ENST00000542018 KIF15Q9NS87 1388 aa29.95■■■□□ 2.39
RAP1B-227ENST00000542018 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.39
RAP1B-227ENST00000542018 PIK3C2BO00750 1634 aa29.95■■■□□ 2.38
RAP1B-227ENST00000542018 ABCC5O15440 1437 aa29.94■■■□□ 2.38
RAP1B-227ENST00000542018 RGS17Q9UGC6 210 aaPredicted RBP29.93■■■□□ 2.38
RAP1B-227ENST00000542018 ERBINQ96RT1 1412 aa29.92■■■□□ 2.38
RAP1B-227ENST00000542018 RRP7BPQ9NSQ0 103 aa29.9■■■□□ 2.38
RAP1B-227ENST00000542018 TMEM2Q9UHN6 1383 aa29.89■■■□□ 2.37
RAP1B-227ENST00000542018 PTPN23Q9H3S7 1636 aa29.86■■■□□ 2.37
RAP1B-227ENST00000542018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.84■■■□□ 2.37
RAP1B-227ENST00000542018 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
RAP1B-227ENST00000542018 KDM5AP29375 1690 aaKnown RBP29.83■■■□□ 2.37
RAP1B-227ENST00000542018 DAPK1P53355 1430 aa29.82■■■□□ 2.36
RAP1B-227ENST00000542018 FAM135BQ49AJ0 1406 aa29.82■■■□□ 2.36
RAP1B-227ENST00000542018 TET3O43151 1660 aa29.82■■■□□ 2.36
RAP1B-227ENST00000542018 IDI1Q13907 227 aa29.81■■■□□ 2.36
RAP1B-227ENST00000542018 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
RAP1B-227ENST00000542018 LMTK2Q8IWU2 1503 aa29.81■■■□□ 2.36
RAP1B-227ENST00000542018 TMEM94Q12767 1356 aa29.79■■■□□ 2.36
RAP1B-227ENST00000542018 KCNA6P17658 529 aa29.75■■■□□ 2.35
RAP1B-227ENST00000542018 NOS1P29475 1434 aa29.74■■■□□ 2.35
RAP1B-227ENST00000542018 RBM33Q96EV2 1170 aaKnown RBP29.74■■■□□ 2.35
RAP1B-227ENST00000542018 ROBO1Q9Y6N7 1651 aa29.74■■■□□ 2.35
RAP1B-227ENST00000542018 KANK1Q14678 1352 aa29.74■■■□□ 2.35
RAP1B-227ENST00000542018 SLC26A8Q96RN1 970 aa29.73■■■□□ 2.35
RAP1B-227ENST00000542018 STAG3Q9UJ98 1225 aa29.73■■■□□ 2.35
RAP1B-227ENST00000542018 FGD6Q6ZV73 1430 aa29.72■■■□□ 2.35
RAP1B-227ENST00000542018 CHIC2Q9UKJ5 165 aa29.71■■■□□ 2.35
RAP1B-227ENST00000542018 NWD1Q149M9 1564 aa29.7■■■□□ 2.35
RAP1B-227ENST00000542018 ADGRB3O60242 1522 aa29.7■■■□□ 2.34
RAP1B-227ENST00000542018 POTEAQ6S8J7 498 aa29.69■■■□□ 2.34
RAP1B-227ENST00000542018 ANKRD30AQ9BXX3 1397 aa29.68■■■□□ 2.34
RAP1B-227ENST00000542018 PROSER2Q86WR7 435 aaPredicted RBP29.67■■■□□ 2.34
RAP1B-227ENST00000542018 NKTRP30414 1462 aaKnown RBP29.64■■■□□ 2.34
RAP1B-227ENST00000542018 MYO5BQ9ULV0 1848 aa29.62■■■□□ 2.33
RAP1B-227ENST00000542018 ADGRL2O95490 1459 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms