RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TPM1P09493 284 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 AMPHP49418 695 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 CCDC70Q6NSX1 233 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 ST18O60284 1047 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
GABRB3-204ENST00000541819 HSPA5P11021 654 aaKnown RBP13.3□□□□□ -0.28
GABRB3-204ENST00000541819 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
GABRB3-204ENST00000541819 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
GABRB3-204ENST00000541819 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
GABRB3-204ENST00000541819 PKD2Q13563 968 aa13.29□□□□□ -0.28
GABRB3-204ENST00000541819 MSH5O43196 834 aa13.29□□□□□ -0.28
GABRB3-204ENST00000541819 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
GABRB3-204ENST00000541819 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
GABRB3-204ENST00000541819 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
GABRB3-204ENST00000541819 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
GABRB3-204ENST00000541819 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.29
GABRB3-204ENST00000541819 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-204ENST00000541819 RAD21O60216 631 aa13.26□□□□□ -0.29
GABRB3-204ENST00000541819 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
GABRB3-204ENST00000541819 GPS2Q13227 327 aa13.26□□□□□ -0.29
GABRB3-204ENST00000541819 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
GABRB3-204ENST00000541819 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
GABRB3-204ENST00000541819 CARMIL2Q6F5E8 1435 aa13.25□□□□□ -0.29
GABRB3-204ENST00000541819 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
GABRB3-204ENST00000541819 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-204ENST00000541819 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
GABRB3-204ENST00000541819 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-204ENST00000541819 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
GABRB3-204ENST00000541819 EVA1CP58658 441 aa13.23□□□□□ -0.29
GABRB3-204ENST00000541819 TRIM29Q14134 588 aa13.23□□□□□ -0.29
GABRB3-204ENST00000541819 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
GABRB3-204ENST00000541819 BECN2A8MW95 431 aa13.22□□□□□ -0.29
GABRB3-204ENST00000541819 FOXD4L5Q5VV16 416 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-204ENST00000541819 FOXD4L4Q8WXT5 416 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-204ENST00000541819 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
GABRB3-204ENST00000541819 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
GABRB3-204ENST00000541819 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
GABRB3-204ENST00000541819 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
GABRB3-204ENST00000541819 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
GABRB3-204ENST00000541819 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
GABRB3-204ENST00000541819 RILPL2Q969X0 211 aa13.21□□□□□ -0.29
GABRB3-204ENST00000541819 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
GABRB3-204ENST00000541819 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
GABRB3-204ENST00000541819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
GABRB3-204ENST00000541819 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
GABRB3-204ENST00000541819 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
GABRB3-204ENST00000541819 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
GABRB3-204ENST00000541819 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
GABRB3-204ENST00000541819 ANKRD30AQ9BXX3 1397 aa13.19□□□□□ -0.3
GABRB3-204ENST00000541819 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
GABRB3-204ENST00000541819 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
GABRB3-204ENST00000541819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.3
GABRB3-204ENST00000541819 NUP155O75694 1391 aa13.19□□□□□ -0.3
GABRB3-204ENST00000541819 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
GABRB3-204ENST00000541819 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
GABRB3-204ENST00000541819 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
GABRB3-204ENST00000541819 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
GABRB3-204ENST00000541819 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
GABRB3-204ENST00000541819 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
GABRB3-204ENST00000541819 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
GABRB3-204ENST00000541819 KIF3BO15066 747 aa13.17□□□□□ -0.3
GABRB3-204ENST00000541819 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
GABRB3-204ENST00000541819 FOXD1Q16676 465 aa13.16□□□□□ -0.3
GABRB3-204ENST00000541819 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
GABRB3-204ENST00000541819 WASHC2CQ9Y4E1 1318 aa13.16□□□□□ -0.3
GABRB3-204ENST00000541819 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
GABRB3-204ENST00000541819 CUX2O14529 1486 aa13.15□□□□□ -0.3
GABRB3-204ENST00000541819 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 APPP05067 770 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 CDR1P51861 262 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 TEFQ10587 303 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 ERICH2A1L162 156 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 CPLX1O14810 134 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 ODF2Q5BJF6 829 aa13.14□□□□□ -0.31
GABRB3-204ENST00000541819 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-204ENST00000541819 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-204ENST00000541819 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
GABRB3-204ENST00000541819 COG3Q96JB2 828 aa13.13□□□□□ -0.31
GABRB3-204ENST00000541819 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
GABRB3-204ENST00000541819 R3HCC1Q9Y3T6 440 aaKnown RBP13.13□□□□□ -0.31
GABRB3-204ENST00000541819 TRDNQ13061 729 aa13.13□□□□□ -0.31
GABRB3-204ENST00000541819 MPHOSPH9Q99550 1183 aa13.13□□□□□ -0.31
GABRB3-204ENST00000541819 ANO2Q9NQ90 1003 aa13.13□□□□□ -0.31
GABRB3-204ENST00000541819 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
GABRB3-204ENST00000541819 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-204ENST00000541819 NFXL1Q6ZNB6 911 aa13.12□□□□□ -0.31
GABRB3-204ENST00000541819 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
GABRB3-204ENST00000541819 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
GABRB3-204ENST00000541819 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
GABRB3-204ENST00000541819 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-204ENST00000541819 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
GABRB3-204ENST00000541819 ZNF592Q92610 1267 aa13.12□□□□□ -0.31
GABRB3-204ENST00000541819 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
GABRB3-204ENST00000541819 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
GABRB3-204ENST00000541819 RUFY1Q96T51 708 aa13.11□□□□□ -0.31
GABRB3-204ENST00000541819 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
GABRB3-204ENST00000541819 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms