RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 FAM135AQ9P2D6 1515 aa27.31■■□□□ 1.96
UBC-210ENST00000541645 EIF2AK4Q9P2K8 1649 aaKnown RBP27.3■■□□□ 1.96
UBC-210ENST00000541645 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
UBC-210ENST00000541645 CEBPAP49715 358 aaPredicted RBP27.27■■□□□ 1.96
UBC-210ENST00000541645 RNF17Q9BXT8 1623 aaKnown RBP27.25■■□□□ 1.95
UBC-210ENST00000541645 WASHC2CQ9Y4E1 1318 aa27.24■■□□□ 1.95
UBC-210ENST00000541645 ITGAEP38570 1179 aa27.23■■□□□ 1.95
UBC-210ENST00000541645 MROH2AA6NES4 1674 aa27.23■■□□□ 1.95
UBC-210ENST00000541645 ANKRD50Q9ULJ7 1429 aa27.22■■□□□ 1.95
UBC-210ENST00000541645 KDM5DQ9BY66 1539 aa27.21■■□□□ 1.95
UBC-210ENST00000541645 PLPPR3Q6T4P5 718 aa27.21■■□□□ 1.95
UBC-210ENST00000541645 NPATQ14207 1427 aa27.18■■□□□ 1.94
UBC-210ENST00000541645 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
UBC-210ENST00000541645 MROH1Q8NDA8 1641 aa27.17■■□□□ 1.94
UBC-210ENST00000541645 C3P01024 1663 aa27.17■■□□□ 1.94
UBC-210ENST00000541645 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
UBC-210ENST00000541645 ABCC3O15438 1527 aa27.14■■□□□ 1.94
UBC-210ENST00000541645 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
UBC-210ENST00000541645 KANK1Q14678 1352 aa27.12■■□□□ 1.93
UBC-210ENST00000541645 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
UBC-210ENST00000541645 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
UBC-210ENST00000541645 PZPP20742 1482 aa27.1■■□□□ 1.93
UBC-210ENST00000541645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.09■■□□□ 1.936e-16■□□□□ 10.3
UBC-210ENST00000541645 VWDEQ8N2E2 1590 aa27.07■■□□□ 1.92
UBC-210ENST00000541645 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
UBC-210ENST00000541645 ARHGAP31Q2M1Z3 1444 aa27.06■■□□□ 1.92
UBC-210ENST00000541645 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
UBC-210ENST00000541645 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
UBC-210ENST00000541645 FBXO31Q5XUX0 539 aaPredicted RBP27.04■■□□□ 1.92
UBC-210ENST00000541645 HFM1A2PYH4 1435 aa27.04■■□□□ 1.92
UBC-210ENST00000541645 NAIPQ13075 1403 aa27.04■■□□□ 1.92
UBC-210ENST00000541645 PREX1Q8TCU6 1659 aa27.03■■□□□ 1.92
UBC-210ENST00000541645 TNRQ92752 1358 aa26.99■■□□□ 1.91
UBC-210ENST00000541645 UNC13BO14795 1591 aa26.99■■□□□ 1.91
UBC-210ENST00000541645 CAMSAP1Q5T5Y3 1602 aa26.98■■□□□ 1.91
UBC-210ENST00000541645 CEP152O94986 1710 aa26.96■■□□□ 1.91
UBC-210ENST00000541645 HSPA2P54652 639 aa26.95■■□□□ 1.9
UBC-210ENST00000541645 SPATA31D1Q6ZQQ2 1576 aa26.95■■□□□ 1.9
UBC-210ENST00000541645 ERVK-7P63135 1459 aa26.94■■□□□ 1.9
UBC-210ENST00000541645 NUP155O75694 1391 aa26.94■■□□□ 1.9
UBC-210ENST00000541645 GCC2Q8IWJ2 1684 aa26.92■■□□□ 1.9
UBC-210ENST00000541645 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
UBC-210ENST00000541645 NLRP1Q9C000 1473 aa26.91■■□□□ 1.9
UBC-210ENST00000541645 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
UBC-210ENST00000541645 RPRD2Q5VT52 1461 aaKnown RBP26.9■■□□□ 1.9
UBC-210ENST00000541645 MYO3AQ8NEV4 1616 aa26.9■■□□□ 1.9
UBC-210ENST00000541645 CEP170BQ9Y4F5 1589 aaPredicted RBP26.88■■□□□ 1.89
UBC-210ENST00000541645 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
UBC-210ENST00000541645 ZNF142P52746 1687 aaPredicted RBP26.86■■□□□ 1.89
UBC-210ENST00000541645 TET3O43151 1660 aa26.85■■□□□ 1.89
UBC-210ENST00000541645 NOS1P29475 1434 aa26.85■■□□□ 1.89
UBC-210ENST00000541645 ACIN1Q9UKV3 1341 aaKnown RBP26.84■■□□□ 1.89
UBC-210ENST00000541645 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
UBC-210ENST00000541645 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
UBC-210ENST00000541645 PLA2R1Q13018 1463 aa26.8■■□□□ 1.88
UBC-210ENST00000541645 SLC52A1Q9NWF4 448 aa26.79■■□□□ 1.88
UBC-210ENST00000541645 TRIM52Q96A61 297 aa26.77■■□□□ 1.88
UBC-210ENST00000541645 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
UBC-210ENST00000541645 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
UBC-210ENST00000541645 IDI1Q13907 227 aa26.75■■□□□ 1.87
UBC-210ENST00000541645 PKD2Q13563 968 aa26.74■■□□□ 1.87
UBC-210ENST00000541645 SYNMO15061 1565 aa26.74■■□□□ 1.87
UBC-210ENST00000541645 E9PCH4 1651 aa26.72■■□□□ 1.87
UBC-210ENST00000541645 HRCP23327 699 aa26.7■■□□□ 1.86
UBC-210ENST00000541645 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
UBC-210ENST00000541645 PTPRTO14522 1441 aa26.69■■□□□ 1.86
UBC-210ENST00000541645 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
UBC-210ENST00000541645 CFAP65Q6ZU64 1925 aaKnown RBP26.69■■□□□ 1.86
UBC-210ENST00000541645 RAB3GAP2Q9H2M9 1393 aa26.68■■□□□ 1.86
UBC-210ENST00000541645 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
UBC-210ENST00000541645 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
UBC-210ENST00000541645 STAG3Q9UJ98 1225 aa26.65■■□□□ 1.86
UBC-210ENST00000541645 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
UBC-210ENST00000541645 UBR1Q8IWV7 1749 aa26.64■■□□□ 1.85
UBC-210ENST00000541645 MPHOSPH9Q99550 1183 aa26.63■■□□□ 1.85
UBC-210ENST00000541645 PIK3C2BO00750 1634 aa26.63■■□□□ 1.85
UBC-210ENST00000541645 ARHGAP23Q9P227 1491 aa26.62■■□□□ 1.85
UBC-210ENST00000541645 SLIT1O75093 1534 aa26.61■■□□□ 1.85
UBC-210ENST00000541645 TMEM2Q9UHN6 1383 aa26.6■■□□□ 1.85
UBC-210ENST00000541645 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
UBC-210ENST00000541645 MED14O60244 1454 aa26.59■■□□□ 1.85
UBC-210ENST00000541645 TRPM2O94759 1503 aa26.56■■□□□ 1.84
UBC-210ENST00000541645 EID1Q9Y6B2 187 aa26.56■■□□□ 1.84
UBC-210ENST00000541645 TXNDC2Q86VQ3 553 aa26.55■■□□□ 1.84
UBC-210ENST00000541645 NEURL4Q96JN8 1562 aa26.54■■□□□ 1.84
UBC-210ENST00000541645 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
UBC-210ENST00000541645 LTKP29376 864 aa26.54■■□□□ 1.84
UBC-210ENST00000541645 SCAF11Q99590 1463 aaKnown RBP26.54■■□□□ 1.84
UBC-210ENST00000541645 NPHP4O75161 1426 aaPredicted RBP26.53■■□□□ 1.84
UBC-210ENST00000541645 TMEM131LA2VDJ0 1609 aa26.53■■□□□ 1.84
UBC-210ENST00000541645 TRIM26Q12899 539 aaPredicted RBP26.52■■□□□ 1.84
UBC-210ENST00000541645 HDGFP51858 240 aaKnown RBP26.51■■□□□ 1.83
UBC-210ENST00000541645 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
UBC-210ENST00000541645 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
UBC-210ENST00000541645 FOXD1Q16676 465 aa26.49■■□□□ 1.83
UBC-210ENST00000541645 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
UBC-210ENST00000541645 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.46■■□□□ 1.83
UBC-210ENST00000541645 RIMS2Q9UQ26 1411 aa26.45■■□□□ 1.82
UBC-210ENST00000541645 CLTCL1P53675 1640 aa26.44■■□□□ 1.82
UBC-210ENST00000541645 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms