RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 PZPP20742 1482 aa19.03■□□□□ 0.64
UBC-209ENST00000541272 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
UBC-209ENST00000541272 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
UBC-209ENST00000541272 MED14O60244 1454 aa19.03■□□□□ 0.64
UBC-209ENST00000541272 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
UBC-209ENST00000541272 TNRQ92752 1358 aa19.02■□□□□ 0.64
UBC-209ENST00000541272 CEP162Q5TB80 1403 aa19■□□□□ 0.63
UBC-209ENST00000541272 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
UBC-209ENST00000541272 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
UBC-209ENST00000541272 DEPDC5O75140 1603 aa19■□□□□ 0.63
UBC-209ENST00000541272 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
UBC-209ENST00000541272 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
UBC-209ENST00000541272 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
UBC-209ENST00000541272 HSPA1LP34931 641 aa18.97■□□□□ 0.63
UBC-209ENST00000541272 TIAM1Q13009 1591 aa18.97■□□□□ 0.63
UBC-209ENST00000541272 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
UBC-209ENST00000541272 WASHC2CQ9Y4E1 1318 aa18.96■□□□□ 0.63
UBC-209ENST00000541272 KIF3BO15066 747 aa18.95■□□□□ 0.62
UBC-209ENST00000541272 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
UBC-209ENST00000541272 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
UBC-209ENST00000541272 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
UBC-209ENST00000541272 ZNF644Q9H582 1327 aaPredicted RBP18.92■□□□□ 0.62
UBC-209ENST00000541272 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
UBC-209ENST00000541272 TSPY4P0CV99 314 aa18.9■□□□□ 0.62
UBC-209ENST00000541272 TSPY10P0CW01 314 aa18.9■□□□□ 0.62
UBC-209ENST00000541272 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
UBC-209ENST00000541272 PIP4K2BP78356 416 aa18.89■□□□□ 0.61
UBC-209ENST00000541272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.617e-46■■■□□ 14.9
UBC-209ENST00000541272 ARHGEF5Q12774 1597 aa18.89■□□□□ 0.61
UBC-209ENST00000541272 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
UBC-209ENST00000541272 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
UBC-209ENST00000541272 SYNMO15061 1565 aa18.85■□□□□ 0.61
UBC-209ENST00000541272 IQGAP1P46940 1657 aa18.85■□□□□ 0.61
UBC-209ENST00000541272 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
UBC-209ENST00000541272 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
UBC-209ENST00000541272 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
UBC-209ENST00000541272 ALKQ9UM73 1620 aa18.83■□□□□ 0.61
UBC-209ENST00000541272 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
UBC-209ENST00000541272 LRRC7Q96NW7 1537 aa18.82■□□□□ 0.6
UBC-209ENST00000541272 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
UBC-209ENST00000541272 MAST1Q9Y2H9 1570 aa18.81■□□□□ 0.6
UBC-209ENST00000541272 ABCC3O15438 1527 aa18.79■□□□□ 0.6
UBC-209ENST00000541272 ERVK-7P63135 1459 aa18.77■□□□□ 0.6
UBC-209ENST00000541272 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
UBC-209ENST00000541272 SLIT1O75093 1534 aa18.75■□□□□ 0.59
UBC-209ENST00000541272 SCAF11Q99590 1463 aaKnown RBP18.75■□□□□ 0.59
UBC-209ENST00000541272 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
UBC-209ENST00000541272 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
UBC-209ENST00000541272 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
UBC-209ENST00000541272 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
UBC-209ENST00000541272 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
UBC-209ENST00000541272 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
UBC-209ENST00000541272 DUOX2Q9NRD8 1548 aa18.7■□□□□ 0.58
UBC-209ENST00000541272 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
UBC-209ENST00000541272 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
UBC-209ENST00000541272 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
UBC-209ENST00000541272 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
UBC-209ENST00000541272 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
UBC-209ENST00000541272 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
UBC-209ENST00000541272 PRDM15P57071 1507 aaPredicted RBP18.65■□□□□ 0.58
UBC-209ENST00000541272 LTKP29376 864 aa18.65■□□□□ 0.58
UBC-209ENST00000541272 TMEM2Q9UHN6 1383 aa18.64■□□□□ 0.57
UBC-209ENST00000541272 RGS17Q9UGC6 210 aaPredicted RBP18.63■□□□□ 0.57
UBC-209ENST00000541272 KCNA6P17658 529 aa18.61■□□□□ 0.57
UBC-209ENST00000541272 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
UBC-209ENST00000541272 KANK1Q14678 1352 aa18.59■□□□□ 0.57
UBC-209ENST00000541272 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
UBC-209ENST00000541272 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
UBC-209ENST00000541272 CEP152O94986 1710 aa18.57■□□□□ 0.56
UBC-209ENST00000541272 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
UBC-209ENST00000541272 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
UBC-209ENST00000541272 TET3O43151 1660 aa18.56■□□□□ 0.56
UBC-209ENST00000541272 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
UBC-209ENST00000541272 EFCAB6Q5THR3 1501 aa18.55■□□□□ 0.56
UBC-209ENST00000541272 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
UBC-209ENST00000541272 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
UBC-209ENST00000541272 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
UBC-209ENST00000541272 PIK3C2BO00750 1634 aa18.53■□□□□ 0.56
UBC-209ENST00000541272 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
UBC-209ENST00000541272 IDI1Q13907 227 aa18.52■□□□□ 0.56
UBC-209ENST00000541272 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
UBC-209ENST00000541272 ABCC5O15440 1437 aa18.51■□□□□ 0.55
UBC-209ENST00000541272 NOS1P29475 1434 aa18.51■□□□□ 0.55
UBC-209ENST00000541272 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
UBC-209ENST00000541272 MSH6P52701 1360 aa18.5■□□□□ 0.55
UBC-209ENST00000541272 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
UBC-209ENST00000541272 JCADQ9P266 1359 aa18.49■□□□□ 0.55
UBC-209ENST00000541272 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
UBC-209ENST00000541272 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
UBC-209ENST00000541272 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
UBC-209ENST00000541272 ANKRD30AQ9BXX3 1397 aa18.48■□□□□ 0.55
UBC-209ENST00000541272 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
UBC-209ENST00000541272 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
UBC-209ENST00000541272 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
UBC-209ENST00000541272 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
UBC-209ENST00000541272 DAPK1P53355 1430 aa18.46■□□□□ 0.55
UBC-209ENST00000541272 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
UBC-209ENST00000541272 ADGRB3O60242 1522 aa18.45■□□□□ 0.54
UBC-209ENST00000541272 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
UBC-209ENST00000541272 PLEKHG1Q9ULL1 1385 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms