RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 WASHC2CQ9Y4E1 1318 aa38.01■■■■□ 3.68
LEMD3-203ENST00000541171 ZNF335Q9H4Z2 1342 aaPredicted RBP38■■■■□ 3.67
LEMD3-203ENST00000541171 KANK4Q5T7N3 995 aaPredicted RBP37.99■■■■□ 3.67
LEMD3-203ENST00000541171 ARHGEF5Q12774 1597 aa37.98■■■■□ 3.67
LEMD3-203ENST00000541171 A2ML1A8K2U0 1454 aa37.96■■■■□ 3.67
LEMD3-203ENST00000541171 TCOF1Q13428 1488 aaKnown RBP37.96■■■■□ 3.67
LEMD3-203ENST00000541171 TNRQ92752 1358 aa37.95■■■■□ 3.67
LEMD3-203ENST00000541171 KDM5DQ9BY66 1539 aa37.95■■■■□ 3.67
LEMD3-203ENST00000541171 IQSEC2Q5JU85 1478 aa37.92■■■■□ 3.66
LEMD3-203ENST00000541171 DNMT1P26358 1616 aaKnown RBP37.9■■■■□ 3.66
LEMD3-203ENST00000541171 PZPP20742 1482 aa37.9■■■■□ 3.66
LEMD3-203ENST00000541171 FAM135AQ9P2D6 1515 aa37.87■■■■□ 3.65
LEMD3-203ENST00000541171 MAP3K1Q13233 1512 aa37.84■■■■□ 3.65
LEMD3-203ENST00000541171 DISP3Q9P2K9 1392 aa37.83■■■■□ 3.65
LEMD3-203ENST00000541171 MYOM3Q5VTT5 1437 aa37.82■■■■□ 3.64
LEMD3-203ENST00000541171 UBAP1LF5GYI3 381 aa37.81■■■■□ 3.64
LEMD3-203ENST00000541171 MIA2Q96PC5 1412 aa37.8■■■■□ 3.64
LEMD3-203ENST00000541171 MAST1Q9Y2H9 1570 aa37.79■■■■□ 3.64
LEMD3-203ENST00000541171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.76■■■■□ 3.64
LEMD3-203ENST00000541171 THEMISQ8N1K5 641 aaPredicted RBP37.75■■■■□ 3.63
LEMD3-203ENST00000541171 APLP2Q06481 763 aa37.74■■■■□ 3.63
LEMD3-203ENST00000541171 ANKLE2Q86XL3 938 aa37.74■■■■□ 3.63
LEMD3-203ENST00000541171 NLRP1Q9C000 1473 aa37.71■■■■□ 3.63
LEMD3-203ENST00000541171 RNF17Q9BXT8 1623 aaKnown RBP37.71■■■■□ 3.63
LEMD3-203ENST00000541171 ABCC3O15438 1527 aa37.7■■■■□ 3.63
LEMD3-203ENST00000541171 POLR1AO95602 1720 aaPredicted RBP37.69■■■■□ 3.62
LEMD3-203ENST00000541171 NEURL4Q96JN8 1562 aa37.68■■■■□ 3.62
LEMD3-203ENST00000541171 UGGT1Q9NYU2 1555 aa37.68■■■■□ 3.62
LEMD3-203ENST00000541171 EIF2AK4Q9P2K8 1649 aaKnown RBP37.65■■■■□ 3.62
LEMD3-203ENST00000541171 ILDR2Q71H61 639 aa37.65■■■■□ 3.62
LEMD3-203ENST00000541171 RRP7BPQ9NSQ0 103 aa37.62■■■■□ 3.61
LEMD3-203ENST00000541171 ZC3H13Q5T200 1668 aaKnown RBP37.62■■■■□ 3.61
LEMD3-203ENST00000541171 DUOX2Q9NRD8 1548 aa37.61■■■■□ 3.61
LEMD3-203ENST00000541171 MROH1Q8NDA8 1641 aa37.6■■■■□ 3.61
LEMD3-203ENST00000541171 SHANK2Q9UPX8 1470 aa37.59■■■■□ 3.61
LEMD3-203ENST00000541171 KIF15Q9NS87 1388 aa37.59■■■■□ 3.61
LEMD3-203ENST00000541171 ABCC5O15440 1437 aa37.59■■■■□ 3.61
LEMD3-203ENST00000541171 NPHP4O75161 1426 aaPredicted RBP37.59■■■■□ 3.61
LEMD3-203ENST00000541171 SPATA31D1Q6ZQQ2 1576 aa37.59■■■■□ 3.61
LEMD3-203ENST00000541171 ERVK-7P63135 1459 aa37.58■■■■□ 3.61
LEMD3-203ENST00000541171 PTPN23Q9H3S7 1636 aa37.56■■■■□ 3.6
LEMD3-203ENST00000541171 SCAF1Q9H7N4 1312 aaKnown RBP37.56■■■■□ 3.6
LEMD3-203ENST00000541171 CEP152O94986 1710 aa37.56■■■■□ 3.6
LEMD3-203ENST00000541171 CPS1P31327 1500 aa37.55■■■■□ 3.6
LEMD3-203ENST00000541171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.54■■■■□ 3.6
LEMD3-203ENST00000541171 PIP4K2BP78356 416 aa37.52■■■■□ 3.6
LEMD3-203ENST00000541171 MED14O60244 1454 aa37.52■■■■□ 3.6
LEMD3-203ENST00000541171 CFAP65Q6ZU64 1925 aaKnown RBP37.51■■■■□ 3.6
LEMD3-203ENST00000541171 DEPDC5O75140 1603 aa37.5■■■■□ 3.59
LEMD3-203ENST00000541171 TOM1O60784 492 aa37.49■■■■□ 3.59
LEMD3-203ENST00000541171 DAPK1P53355 1430 aa37.49■■■■□ 3.59
LEMD3-203ENST00000541171 VWDEQ8N2E2 1590 aa37.48■■■■□ 3.59
LEMD3-203ENST00000541171 CHIC2Q9UKJ5 165 aa37.48■■■■□ 3.59
LEMD3-203ENST00000541171 CROCC2H7BZ55 1655 aa37.47■■■■□ 3.59
LEMD3-203ENST00000541171 FGD6Q6ZV73 1430 aa37.47■■■■□ 3.59
LEMD3-203ENST00000541171 ERBINQ96RT1 1412 aa37.47■■■■□ 3.59
LEMD3-203ENST00000541171 IQGAP1P46940 1657 aa37.43■■■■□ 3.58
LEMD3-203ENST00000541171 PRDM15P57071 1507 aaPredicted RBP37.42■■■■□ 3.58
LEMD3-203ENST00000541171 ARHGAP31Q2M1Z3 1444 aa37.39■■■■□ 3.58
LEMD3-203ENST00000541171 HSPA1LP34931 641 aa37.39■■■■□ 3.58
LEMD3-203ENST00000541171 KANK1Q14678 1352 aa37.39■■■■□ 3.58
LEMD3-203ENST00000541171 SOCS7O14512 581 aa37.38■■■■□ 3.57
LEMD3-203ENST00000541171 ANKRD30AQ9BXX3 1397 aa37.38■■■■□ 3.57
LEMD3-203ENST00000541171 UBR1Q8IWV7 1749 aa37.37■■■■□ 3.57
LEMD3-203ENST00000541171 TXNDC2Q86VQ3 553 aa37.35■■■■□ 3.57
LEMD3-203ENST00000541171 LTKP29376 864 aa37.34■■■■□ 3.57
LEMD3-203ENST00000541171 SCAF11Q99590 1463 aaKnown RBP37.33■■■■□ 3.57
LEMD3-203ENST00000541171 STAG3Q9UJ98 1225 aa37.31■■■■□ 3.56
LEMD3-203ENST00000541171 FAM50AQ14320 339 aaKnown RBP37.3■■■■□ 3.56
LEMD3-203ENST00000541171 EID1Q9Y6B2 187 aa37.28■■■■□ 3.56
LEMD3-203ENST00000541171 STRCP1A6NGW2 1772 aa37.27■■■■□ 3.56
LEMD3-203ENST00000541171 ARHGAP23Q9P227 1491 aa37.26■■■■□ 3.56
LEMD3-203ENST00000541171 LRRC7Q96NW7 1537 aa37.26■■■■□ 3.56
LEMD3-203ENST00000541171 SLIT1O75093 1534 aa37.25■■■■□ 3.55
LEMD3-203ENST00000541171 PIK3C2BO00750 1634 aa37.23■■■■□ 3.55
LEMD3-203ENST00000541171 SENP3Q9H4L4 574 aaPredicted RBP37.22■■■■□ 3.55
LEMD3-203ENST00000541171 IDI1Q13907 227 aa37.21■■■■□ 3.55
LEMD3-203ENST00000541171 ALKQ9UM73 1620 aa37.2■■■■□ 3.55
LEMD3-203ENST00000541171 LMTK2Q8IWU2 1503 aa37.2■■■■□ 3.55
LEMD3-203ENST00000541171 TMEM2Q9UHN6 1383 aa37.19■■■■□ 3.54
LEMD3-203ENST00000541171 SYNMO15061 1565 aa37.16■■■■□ 3.54
LEMD3-203ENST00000541171 ADGRL2O95490 1459 aa37.15■■■■□ 3.54
LEMD3-203ENST00000541171 EFCAB6Q5THR3 1501 aa37.12■■■■□ 3.53
LEMD3-203ENST00000541171 ANKRD50Q9ULJ7 1429 aa37.09■■■■□ 3.53
LEMD3-203ENST00000541171 MED1Q15648 1581 aaPredicted RBP37.08■■■■□ 3.53
LEMD3-203ENST00000541171 NOS1P29475 1434 aa37.08■■■■□ 3.53
LEMD3-203ENST00000541171 SLC26A8Q96RN1 970 aa37.04■■■■□ 3.52
LEMD3-203ENST00000541171 SLC52A1Q9NWF4 448 aa37.03■■■■□ 3.52
LEMD3-203ENST00000541171 KDM5AP29375 1690 aaKnown RBP37.02■■■■□ 3.52
LEMD3-203ENST00000541171 BCANQ96GW7 911 aa37■■■■□ 3.51
LEMD3-203ENST00000541171 ADGRB3O60242 1522 aa36.98■■■■□ 3.51
LEMD3-203ENST00000541171 KCNA6P17658 529 aa36.97■■■■□ 3.51
LEMD3-203ENST00000541171 PHF23Q9BUL5 403 aaPredicted RBP36.97■■■■□ 3.51
LEMD3-203ENST00000541171 XIRP1Q702N8 1843 aaKnown RBP36.94■■■■□ 3.5
LEMD3-203ENST00000541171 RPRD2Q5VT52 1461 aaKnown RBP36.94■■■■□ 3.5
LEMD3-203ENST00000541171 TMEM94Q12767 1356 aa36.93■■■■□ 3.5
LEMD3-203ENST00000541171 PROSER2Q86WR7 435 aaPredicted RBP36.93■■■■□ 3.5
LEMD3-203ENST00000541171 RBM33Q96EV2 1170 aaKnown RBP36.93■■■■□ 3.5
LEMD3-203ENST00000541171 TET3O43151 1660 aa36.93■■■■□ 3.5
LEMD3-203ENST00000541171 CHGAP10645 457 aaKnown RBP36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms