RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MADDQ8WXG6 1647 aa23.26■■□□□ 1.31
DDB1-218ENST00000540784 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
DDB1-218ENST00000540784 CNTLNQ9NXG0 1405 aa23.25■■□□□ 1.31
DDB1-218ENST00000540784 NAIPQ13075 1403 aa23.24■■□□□ 1.31
DDB1-218ENST00000540784 CEBPAP49715 358 aaPredicted RBP23.23■■□□□ 1.31
DDB1-218ENST00000540784 KANK1Q14678 1352 aa23.23■■□□□ 1.31
DDB1-218ENST00000540784 PTPRMP28827 1452 aa23.23■■□□□ 1.31
DDB1-218ENST00000540784 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
DDB1-218ENST00000540784 HFM1A2PYH4 1435 aa23.22■■□□□ 1.31
DDB1-218ENST00000540784 FER1L4A9Z1Z3 1794 aa23.2■■□□□ 1.3
DDB1-218ENST00000540784 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
DDB1-218ENST00000540784 RIMS1Q86UR5 1692 aaKnown RBP23.19■■□□□ 1.3
DDB1-218ENST00000540784 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
DDB1-218ENST00000540784 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
DDB1-218ENST00000540784 NUP155O75694 1391 aa23.14■■□□□ 1.3
DDB1-218ENST00000540784 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
DDB1-218ENST00000540784 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.29
DDB1-218ENST00000540784 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
DDB1-218ENST00000540784 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
DDB1-218ENST00000540784 MROH1Q8NDA8 1641 aa23.13■■□□□ 1.29
DDB1-218ENST00000540784 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
DDB1-218ENST00000540784 ABCC3O15438 1527 aa23.11■■□□□ 1.29
DDB1-218ENST00000540784 PRDM15P57071 1507 aaPredicted RBP23.11■■□□□ 1.29
DDB1-218ENST00000540784 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
DDB1-218ENST00000540784 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
DDB1-218ENST00000540784 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
DDB1-218ENST00000540784 MROH2AA6NES4 1674 aa23.08■■□□□ 1.29
DDB1-218ENST00000540784 C3P01024 1663 aa23.06■■□□□ 1.28
DDB1-218ENST00000540784 UNC13BO14795 1591 aa23.06■■□□□ 1.28
DDB1-218ENST00000540784 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
DDB1-218ENST00000540784 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
DDB1-218ENST00000540784 RAB3GAP2Q9H2M9 1393 aa23.04■■□□□ 1.28
DDB1-218ENST00000540784 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
DDB1-218ENST00000540784 HRCP23327 699 aa23.04■■□□□ 1.28
DDB1-218ENST00000540784 PZPP20742 1482 aa23.04■■□□□ 1.28
DDB1-218ENST00000540784 NPATQ14207 1427 aa23.03■■□□□ 1.28
DDB1-218ENST00000540784 ARHGAP31Q2M1Z3 1444 aa23.03■■□□□ 1.28
DDB1-218ENST00000540784 SLC4A1APQ9BWU0 796 aaKnown RBP23.02■■□□□ 1.28
DDB1-218ENST00000540784 CEP152O94986 1710 aa23.02■■□□□ 1.28
DDB1-218ENST00000540784 CAMSAP1Q5T5Y3 1602 aa22.99■■□□□ 1.27
DDB1-218ENST00000540784 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
DDB1-218ENST00000540784 TNRQ92752 1358 aa22.98■■□□□ 1.27
DDB1-218ENST00000540784 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
DDB1-218ENST00000540784 PKD2Q13563 968 aa22.96■■□□□ 1.27
DDB1-218ENST00000540784 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
DDB1-218ENST00000540784 EFCAB6Q5THR3 1501 aa22.94■■□□□ 1.26
DDB1-218ENST00000540784 TET3O43151 1660 aa22.93■■□□□ 1.26
DDB1-218ENST00000540784 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
DDB1-218ENST00000540784 RPRD2Q5VT52 1461 aaKnown RBP22.93■■□□□ 1.26
DDB1-218ENST00000540784 UHRF1BP1Q6BDS2 1440 aa22.93■■□□□ 1.26
DDB1-218ENST00000540784 PCGF6Q9BYE7 350 aa22.91■■□□□ 1.26
DDB1-218ENST00000540784 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
DDB1-218ENST00000540784 SLC52A1Q9NWF4 448 aa22.9■■□□□ 1.26
DDB1-218ENST00000540784 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.26
DDB1-218ENST00000540784 IDI1Q13907 227 aa22.88■■□□□ 1.25
DDB1-218ENST00000540784 NOS1P29475 1434 aa22.88■■□□□ 1.25
DDB1-218ENST00000540784 HSPA2P54652 639 aa22.87■■□□□ 1.25
DDB1-218ENST00000540784 FOXD1Q16676 465 aa22.87■■□□□ 1.25
DDB1-218ENST00000540784 E9PCH4 1651 aa22.86■■□□□ 1.25
DDB1-218ENST00000540784 PREX1Q8TCU6 1659 aa22.86■■□□□ 1.25
DDB1-218ENST00000540784 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
DDB1-218ENST00000540784 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
DDB1-218ENST00000540784 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
DDB1-218ENST00000540784 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
DDB1-218ENST00000540784 A2ML1A8K2U0 1454 aa22.83■■□□□ 1.25
DDB1-218ENST00000540784 PTPRTO14522 1441 aa22.81■■□□□ 1.24
DDB1-218ENST00000540784 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
DDB1-218ENST00000540784 CHGAP10645 457 aaKnown RBP22.79■■□□□ 1.24
DDB1-218ENST00000540784 SYNMO15061 1565 aa22.78■■□□□ 1.24
DDB1-218ENST00000540784 CEP170BQ9Y4F5 1589 aaPredicted RBP22.78■■□□□ 1.24
DDB1-218ENST00000540784 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
DDB1-218ENST00000540784 PLA2R1Q13018 1463 aa22.75■■□□□ 1.23
DDB1-218ENST00000540784 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
DDB1-218ENST00000540784 ZNF142P52746 1687 aaPredicted RBP22.71■■□□□ 1.23
DDB1-218ENST00000540784 NCKAP5LQ9HCH0 1330 aa22.71■■□□□ 1.23
DDB1-218ENST00000540784 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
DDB1-218ENST00000540784 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
DDB1-218ENST00000540784 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
DDB1-218ENST00000540784 TRPM2O94759 1503 aa22.69■■□□□ 1.22
DDB1-218ENST00000540784 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
DDB1-218ENST00000540784 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
DDB1-218ENST00000540784 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
DDB1-218ENST00000540784 ZNF326Q5BKZ1 582 aaKnown RBP22.68■■□□□ 1.22
DDB1-218ENST00000540784 CCDC144AA2RUR9 1427 aa22.67■■□□□ 1.22
DDB1-218ENST00000540784 ANKRD30BQ9BXX2 1392 aa22.67■■□□□ 1.22
DDB1-218ENST00000540784 TMEM2Q9UHN6 1383 aa22.66■■□□□ 1.22
DDB1-218ENST00000540784 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
DDB1-218ENST00000540784 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
DDB1-218ENST00000540784 LTKP29376 864 aa22.64■■□□□ 1.21
DDB1-218ENST00000540784 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
DDB1-218ENST00000540784 CLTCL1P53675 1640 aa22.63■■□□□ 1.21
DDB1-218ENST00000540784 TMEM131LA2VDJ0 1609 aa22.62■■□□□ 1.21
DDB1-218ENST00000540784 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
DDB1-218ENST00000540784 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
DDB1-218ENST00000540784 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
DDB1-218ENST00000540784 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
DDB1-218ENST00000540784 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
DDB1-218ENST00000540784 SLIT1O75093 1534 aa22.59■■□□□ 1.21
DDB1-218ENST00000540784 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
DDB1-218ENST00000540784 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms