RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 FGD6Q6ZV73 1430 aa32.76■■■□□ 2.83
CHFR-217ENST00000540537 NCOA1Q15788 1441 aa32.74■■■□□ 2.83
CHFR-217ENST00000540537 TCOF1Q13428 1488 aaKnown RBP32.74■■■□□ 2.83
CHFR-217ENST00000540537 SHANK2Q9UPX8 1470 aa32.74■■■□□ 2.83
CHFR-217ENST00000540537 RNF17Q9BXT8 1623 aaKnown RBP32.73■■■□□ 2.83
CHFR-217ENST00000540537 EIF2AK4Q9P2K8 1649 aaKnown RBP32.73■■■□□ 2.83
CHFR-217ENST00000540537 CROCC2H7BZ55 1655 aa32.73■■■□□ 2.83
CHFR-217ENST00000540537 PTPRTO14522 1441 aa32.72■■■□□ 2.83
CHFR-217ENST00000540537 WASHC2CQ9Y4E1 1318 aa32.72■■■□□ 2.83
CHFR-217ENST00000540537 ABCC5O15440 1437 aa32.71■■■□□ 2.83
CHFR-217ENST00000540537 CEP170BQ9Y4F5 1589 aaPredicted RBP32.7■■■□□ 2.83
CHFR-217ENST00000540537 CAMSAP1Q5T5Y3 1602 aa32.7■■■□□ 2.83
CHFR-217ENST00000540537 PZPP20742 1482 aa32.7■■■□□ 2.83
CHFR-217ENST00000540537 DUOX2Q9NRD8 1548 aa32.69■■■□□ 2.82
CHFR-217ENST00000540537 DNMT1P26358 1616 aaKnown RBP32.68■■■□□ 2.82
CHFR-217ENST00000540537 DAPK1P53355 1430 aa32.66■■■□□ 2.82
CHFR-217ENST00000540537 PLA2R1Q13018 1463 aa32.64■■■□□ 2.82
CHFR-217ENST00000540537 ZC3H13Q5T200 1668 aaKnown RBP32.63■■■□□ 2.81
CHFR-217ENST00000540537 A2ML1A8K2U0 1454 aa32.63■■■□□ 2.81
CHFR-217ENST00000540537 KIF15Q9NS87 1388 aa32.63■■■□□ 2.81
CHFR-217ENST00000540537 CERKQ8TCT0 537 aa32.63■■■□□ 2.81
CHFR-217ENST00000540537 TNRQ92752 1358 aa32.62■■■□□ 2.81
CHFR-217ENST00000540537 ABCC3O15438 1527 aa32.61■■■□□ 2.81
CHFR-217ENST00000540537 FBXO31Q5XUX0 539 aaPredicted RBP32.61■■■□□ 2.81
CHFR-217ENST00000540537 MROH1Q8NDA8 1641 aa32.61■■■□□ 2.81
CHFR-217ENST00000540537 ERBINQ96RT1 1412 aa32.59■■■□□ 2.81
CHFR-217ENST00000540537 PKD2Q13563 968 aa32.55■■■□□ 2.8
CHFR-217ENST00000540537 RRP7BPQ9NSQ0 103 aa32.55■■■□□ 2.8
CHFR-217ENST00000540537 NCKAP5LQ9HCH0 1330 aa32.53■■■□□ 2.8
CHFR-217ENST00000540537 ANKRD30AQ9BXX3 1397 aa32.52■■■□□ 2.8
CHFR-217ENST00000540537 PRDM15P57071 1507 aaPredicted RBP32.51■■■□□ 2.8
CHFR-217ENST00000540537 NLRP1Q9C000 1473 aa32.51■■■□□ 2.79
CHFR-217ENST00000540537 CEP152O94986 1710 aa32.51■■■□□ 2.79
CHFR-217ENST00000540537 SPATA31D1Q6ZQQ2 1576 aa32.48■■■□□ 2.79
CHFR-217ENST00000540537 CHIC2Q9UKJ5 165 aa32.47■■■□□ 2.79
CHFR-217ENST00000540537 DEPDC5O75140 1603 aa32.47■■■□□ 2.79
CHFR-217ENST00000540537 LTBP4Q8N2S1 1624 aa32.46■■■□□ 2.79
CHFR-217ENST00000540537 ADGRL2O95490 1459 aa32.46■■■□□ 2.79
CHFR-217ENST00000540537 FAM50AQ14320 339 aaKnown RBP32.45■■■□□ 2.79
CHFR-217ENST00000540537 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
CHFR-217ENST00000540537 ARHGAP31Q2M1Z3 1444 aa32.41■■■□□ 2.78
CHFR-217ENST00000540537 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
CHFR-217ENST00000540537 POLR1AO95602 1720 aaPredicted RBP32.4■■■□□ 2.78
CHFR-217ENST00000540537 THEMISQ8N1K5 641 aaPredicted RBP32.39■■■□□ 2.78
CHFR-217ENST00000540537 KANK1Q14678 1352 aa32.38■■■□□ 2.77
CHFR-217ENST00000540537 CFAP65Q6ZU64 1925 aaKnown RBP32.38■■■□□ 2.77
CHFR-217ENST00000540537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.36■■■□□ 2.77
CHFR-217ENST00000540537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.77
CHFR-217ENST00000540537 NEURL4Q96JN8 1562 aa32.35■■■□□ 2.77
CHFR-217ENST00000540537 IQSEC2Q5JU85 1478 aa32.35■■■□□ 2.77
CHFR-217ENST00000540537 VWDEQ8N2E2 1590 aa32.34■■■□□ 2.77
CHFR-217ENST00000540537 LMTK2Q8IWU2 1503 aa32.33■■■□□ 2.77
CHFR-217ENST00000540537 ZNF335Q9H4Z2 1342 aaPredicted RBP32.32■■■□□ 2.76
CHFR-217ENST00000540537 ANKLE2Q86XL3 938 aa32.32■■■□□ 2.76
CHFR-217ENST00000540537 ANKRD50Q9ULJ7 1429 aa32.28■■■□□ 2.76
CHFR-217ENST00000540537 MED14O60244 1454 aa32.26■■■□□ 2.75
CHFR-217ENST00000540537 UBR1Q8IWV7 1749 aa32.25■■■□□ 2.75
CHFR-217ENST00000540537 EFCAB6Q5THR3 1501 aa32.21■■■□□ 2.75
CHFR-217ENST00000540537 ROCK1Q13464 1354 aa32.21■■■□□ 2.75
CHFR-217ENST00000540537 NPHP4O75161 1426 aaPredicted RBP32.21■■■□□ 2.75
CHFR-217ENST00000540537 PPARGC1BQ86YN6 1023 aaKnown RBP32.18■■■□□ 2.74
CHFR-217ENST00000540537 IQGAP1P46940 1657 aa32.18■■■□□ 2.74
CHFR-217ENST00000540537 ARHGAP23Q9P227 1491 aa32.14■■■□□ 2.74
CHFR-217ENST00000540537 SLIT1O75093 1534 aa32.14■■■□□ 2.74
CHFR-217ENST00000540537 CPS1P31327 1500 aa32.14■■■□□ 2.74
CHFR-217ENST00000540537 PIK3C2BO00750 1634 aa32.14■■■□□ 2.74
CHFR-217ENST00000540537 UNC13BO14795 1591 aa32.13■■■□□ 2.73
CHFR-217ENST00000540537 NOS1P29475 1434 aa32.13■■■□□ 2.73
CHFR-217ENST00000540537 KDM5AP29375 1690 aaKnown RBP32.11■■■□□ 2.73
CHFR-217ENST00000540537 SYNMO15061 1565 aa32.11■■■□□ 2.73
CHFR-217ENST00000540537 RPRD2Q5VT52 1461 aaKnown RBP32.11■■■□□ 2.73
CHFR-217ENST00000540537 SCAF11Q99590 1463 aaKnown RBP32.11■■■□□ 2.73
CHFR-217ENST00000540537 TET3O43151 1660 aa32.11■■■□□ 2.73
CHFR-217ENST00000540537 IDI1Q13907 227 aa32.07■■■□□ 2.72
CHFR-217ENST00000540537 GCC2Q8IWJ2 1684 aa32.05■■■□□ 2.72
CHFR-217ENST00000540537 ITGAEP38570 1179 aa32.05■■■□□ 2.72
CHFR-217ENST00000540537 STAG3Q9UJ98 1225 aa32.05■■■□□ 2.72
CHFR-217ENST00000540537 LTKP29376 864 aa32.04■■■□□ 2.72
CHFR-217ENST00000540537 TXNDC2Q86VQ3 553 aa32.04■■■□□ 2.72
CHFR-217ENST00000540537 TMEM2Q9UHN6 1383 aa32.04■■■□□ 2.72
CHFR-217ENST00000540537 SLC52A1Q9NWF4 448 aa32.03■■■□□ 2.72
CHFR-217ENST00000540537 EID1Q9Y6B2 187 aa32.03■■■□□ 2.72
CHFR-217ENST00000540537 RRBP1Q9P2E9 1410 aaKnown RBP32.02■■■□□ 2.72
CHFR-217ENST00000540537 UBAP1LF5GYI3 381 aa32.01■■■□□ 2.71
CHFR-217ENST00000540537 ADGRB3O60242 1522 aa32■■■□□ 2.71
CHFR-217ENST00000540537 IQGAP3Q86VI3 1631 aa32■■■□□ 2.71
CHFR-217ENST00000540537 STRCP1A6NGW2 1772 aa31.95■■■□□ 2.71
CHFR-217ENST00000540537 E9PCH4 1651 aa31.94■■■□□ 2.7
CHFR-217ENST00000540537 NUP155O75694 1391 aa31.93■■■□□ 2.7
CHFR-217ENST00000540537 LRRC7Q96NW7 1537 aa31.89■■■□□ 2.7
CHFR-217ENST00000540537 TOM1O60784 492 aa31.87■■■□□ 2.69
CHFR-217ENST00000540537 MYO5BQ9ULV0 1848 aa31.85■■■□□ 2.69
CHFR-217ENST00000540537 TMEM131LA2VDJ0 1609 aa31.84■■■□□ 2.69
CHFR-217ENST00000540537 ZFYVE9O95405 1425 aa31.82■■■□□ 2.68
CHFR-217ENST00000540537 NAIPQ13075 1403 aa31.8■■■□□ 2.68
CHFR-217ENST00000540537 RIMS2Q9UQ26 1411 aa31.78■■■□□ 2.68
CHFR-217ENST00000540537 ALKQ9UM73 1620 aa31.76■■■□□ 2.67
CHFR-217ENST00000540537 HDGFP51858 240 aaKnown RBP31.76■■■□□ 2.67
CHFR-217ENST00000540537 PIP4K2BP78356 416 aa31.76■■■□□ 2.67
CHFR-217ENST00000540537 SCAF1Q9H7N4 1312 aaKnown RBP31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms