RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 NUTM2FA1L443 756 aa8.59□□□□□ -1.03
MDM2-226ENST00000540352 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
MDM2-226ENST00000540352 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
MDM2-226ENST00000540352 PTPREP23469 700 aa8.58□□□□□ -1.04
MDM2-226ENST00000540352 LMOD2Q6P5Q4 547 aa8.58□□□□□ -1.04
MDM2-226ENST00000540352 KCNK17Q96T54 332 aa8.58□□□□□ -1.04
MDM2-226ENST00000540352 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
MDM2-226ENST00000540352 PRIM1P49642 420 aaKnown RBP8.56□□□□□ -1.04
MDM2-226ENST00000540352 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
MDM2-226ENST00000540352 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
MDM2-226ENST00000540352 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
MDM2-226ENST00000540352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
MDM2-226ENST00000540352 PBX2P40425 430 aa8.54□□□□□ -1.04
MDM2-226ENST00000540352 C6orf132Q5T0Z8 1188 aa8.54□□□□□ -1.04
MDM2-226ENST00000540352 CDHR5Q9HBB8 845 aa8.54□□□□□ -1.04
MDM2-226ENST00000540352 AXIN2Q9Y2T1 843 aa8.54□□□□□ -1.04
MDM2-226ENST00000540352 ARHGAP33O14559 1287 aa8.53□□□□□ -1.04
MDM2-226ENST00000540352 PSEN2P49810 448 aa8.53□□□□□ -1.04
MDM2-226ENST00000540352 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
MDM2-226ENST00000540352 FCHSD2O94868 740 aa8.51□□□□□ -1.05
MDM2-226ENST00000540352 MYT1Q01538 1121 aa8.51□□□□□ -1.05
MDM2-226ENST00000540352 COL9A1P20849 921 aa8.5□□□□□ -1.05
MDM2-226ENST00000540352 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
MDM2-226ENST00000540352 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
MDM2-226ENST00000540352 PTGDRQ13258 359 aa8.48□□□□□ -1.05
MDM2-226ENST00000540352 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
MDM2-226ENST00000540352 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.05
MDM2-226ENST00000540352 ANKRD13DQ6ZTN6 518 aa8.47□□□□□ -1.05
MDM2-226ENST00000540352 HIC1Q14526 733 aa8.46□□□□□ -1.06
MDM2-226ENST00000540352 GNPATO15228 680 aa8.45□□□□□ -1.06
MDM2-226ENST00000540352 PRSS12P56730 875 aa8.45□□□□□ -1.06
MDM2-226ENST00000540352 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
MDM2-226ENST00000540352 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
MDM2-226ENST00000540352 ZC3H15Q8WU90 426 aaKnown RBP8.44□□□□□ -1.06
MDM2-226ENST00000540352 CDCA7LQ96GN5 454 aa8.44□□□□□ -1.06
MDM2-226ENST00000540352 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
MDM2-226ENST00000540352 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
MDM2-226ENST00000540352 GPR37O15354 613 aa8.43□□□□□ -1.06
MDM2-226ENST00000540352 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
MDM2-226ENST00000540352 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
MDM2-226ENST00000540352 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
MDM2-226ENST00000540352 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
MDM2-226ENST00000540352 PACS2Q86VP3 889 aa8.41□□□□□ -1.06
MDM2-226ENST00000540352 KRI1Q8N9T8 703 aaKnown RBP8.41□□□□□ -1.06
MDM2-226ENST00000540352 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
MDM2-226ENST00000540352 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
MDM2-226ENST00000540352 TK2O00142 265 aa8.4□□□□□ -1.06
MDM2-226ENST00000540352 SLC4A5Q9BY07 1137 aa8.4□□□□□ -1.06
MDM2-226ENST00000540352 KIAA1468Q9P260 1216 aa8.4□□□□□ -1.06
MDM2-226ENST00000540352 NBPF26B4DH59 902 aa8.39□□□□□ -1.07
MDM2-226ENST00000540352 FECHP22830 423 aa8.39□□□□□ -1.07
MDM2-226ENST00000540352 NBPF3Q9H094 633 aa8.39□□□□□ -1.07
MDM2-226ENST00000540352 TSKSQ9UJT2 592 aa8.39□□□□□ -1.07
MDM2-226ENST00000540352 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
MDM2-226ENST00000540352 PNMA3Q9UL41 463 aa8.38□□□□□ -1.07
MDM2-226ENST00000540352 ZMYND10O75800 440 aa8.37□□□□□ -1.07
MDM2-226ENST00000540352 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
MDM2-226ENST00000540352 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
MDM2-226ENST00000540352 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
MDM2-226ENST00000540352 NUDT18Q6ZVK8 323 aa8.36□□□□□ -1.07
MDM2-226ENST00000540352 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
MDM2-226ENST00000540352 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
MDM2-226ENST00000540352 FAM198AQ9UFP1 575 aa8.36□□□□□ -1.07
MDM2-226ENST00000540352 SEPT9Q9UHD8 586 aaPredicted RBP8.36□□□□□ -1.07
MDM2-226ENST00000540352 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
MDM2-226ENST00000540352 SMAPO00193 183 aa8.35□□□□□ -1.07
MDM2-226ENST00000540352 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
MDM2-226ENST00000540352 TATDN2Q93075 761 aa8.35□□□□□ -1.07
MDM2-226ENST00000540352 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
MDM2-226ENST00000540352 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
MDM2-226ENST00000540352 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
MDM2-226ENST00000540352 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
MDM2-226ENST00000540352 IRF6O14896 467 aa8.32□□□□□ -1.08
MDM2-226ENST00000540352 OATP04181 439 aa8.32□□□□□ -1.08
MDM2-226ENST00000540352 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
MDM2-226ENST00000540352 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
MDM2-226ENST00000540352 HRO43593 1189 aa8.31□□□□□ -1.08
MDM2-226ENST00000540352 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
MDM2-226ENST00000540352 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
MDM2-226ENST00000540352 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
MDM2-226ENST00000540352 BHMG1C9JSJ3 638 aaPredicted RBP8.29□□□□□ -1.08
MDM2-226ENST00000540352 METTL3Q86U44 580 aaKnown RBP8.29□□□□□ -1.08
MDM2-226ENST00000540352 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
MDM2-226ENST00000540352 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
MDM2-226ENST00000540352 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
MDM2-226ENST00000540352 AK7Q96M32 723 aa8.29□□□□□ -1.08
MDM2-226ENST00000540352 RNF40O75150 1001 aa8.28□□□□□ -1.08
MDM2-226ENST00000540352 DNAJB2P25686 324 aa8.28□□□□□ -1.08
MDM2-226ENST00000540352 ANKK1Q8NFD2 765 aa8.28□□□□□ -1.08
MDM2-226ENST00000540352 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
MDM2-226ENST00000540352 EYA1Q99502 592 aa8.28□□□□□ -1.08
MDM2-226ENST00000540352 MYT1LQ9UL68 1186 aa8.28□□□□□ -1.08
MDM2-226ENST00000540352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
MDM2-226ENST00000540352 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
MDM2-226ENST00000540352 SLC4A3P48751 1232 aa8.27□□□□□ -1.09
MDM2-226ENST00000540352 NLRP7Q8WX94 980 aa8.27□□□□□ -1.09
MDM2-226ENST00000540352 WNT2BQ93097 391 aa8.27□□□□□ -1.09
MDM2-226ENST00000540352 TTLL12Q14166 644 aaPredicted RBP8.26□□□□□ -1.09
MDM2-226ENST00000540352 KCTD12Q96CX2 325 aaKnown RBP8.26□□□□□ -1.09
MDM2-226ENST00000540352 LRCH3Q96II8 777 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms