RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 REPIN1Q9BWE0 567 aaKnown RBP6.46□□□□□ -1.38
SNHG1-210ENST00000539303 PLEKHG3A1L390 1219 aa6.45□□□□□ -1.38
SNHG1-210ENST00000539303 ARSIQ5FYB1 569 aa6.45□□□□□ -1.38
SNHG1-210ENST00000539303 JPH4Q96JJ6 628 aa6.45□□□□□ -1.38
SNHG1-210ENST00000539303 PHOX2BQ99453 314 aa6.45□□□□□ -1.38
SNHG1-210ENST00000539303 EPAS1Q99814 870 aa6.45□□□□□ -1.38
SNHG1-210ENST00000539303 FOSBP53539 338 aa6.44□□□□□ -1.38
SNHG1-210ENST00000539303 TYW1BQ6NUM6 668 aa6.44□□□□□ -1.38
SNHG1-210ENST00000539303 NLRP7Q8WX94 980 aa6.44□□□□□ -1.38
SNHG1-210ENST00000539303 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-210ENST00000539303 ZNF454Q8N9F8 522 aa6.43□□□□□ -1.38
SNHG1-210ENST00000539303 MS4A1P11836 297 aa6.42□□□□□ -1.38
SNHG1-210ENST00000539303 GPR153Q6NV75 609 aa6.42□□□□□ -1.38
SNHG1-210ENST00000539303 GIGYF2Q6Y7W6 1299 aaKnown RBP6.42□□□□□ -1.38
SNHG1-210ENST00000539303 ADAM33Q9BZ11 813 aa6.42□□□□□ -1.38
SNHG1-210ENST00000539303 PADI6Q6TGC4 694 aa6.41□□□□□ -1.38
SNHG1-210ENST00000539303 DOK7Q18PE1 504 aa6.4□□□□□ -1.38
SNHG1-210ENST00000539303 C6orf132Q5T0Z8 1188 aa6.4□□□□□ -1.38
SNHG1-210ENST00000539303 ZDHHC16Q969W1 377 aa6.4□□□□□ -1.38
SNHG1-210ENST00000539303 SCUBE2Q9NQ36 999 aa6.4□□□□□ -1.38
SNHG1-210ENST00000539303 LHX6Q9UPM6 363 aa6.4□□□□□ -1.38
SNHG1-210ENST00000539303 MDM2Q00987 491 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-210ENST00000539303 FBXW7Q969H0 707 aa6.39□□□□□ -1.39
SNHG1-210ENST00000539303 OTUD5Q96G74 571 aa6.38□□□□□ -1.39
SNHG1-210ENST00000539303 TMUB1Q9BVT8 246 aa6.38□□□□□ -1.39
SNHG1-210ENST00000539303 COL9A1P20849 921 aa6.37□□□□□ -1.39
SNHG1-210ENST00000539303 LHX8Q68G74 356 aa6.37□□□□□ -1.39
SNHG1-210ENST00000539303 FAM198AQ9UFP1 575 aa6.37□□□□□ -1.39
SNHG1-210ENST00000539303 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
SNHG1-210ENST00000539303 METTL3Q86U44 580 aaKnown RBP6.36□□□□□ -1.39
SNHG1-210ENST00000539303 ZNF710Q8N1W2 664 aa6.36□□□□□ -1.39
SNHG1-210ENST00000539303 DDRGK1Q96HY6 314 aa6.36□□□□□ -1.39
SNHG1-210ENST00000539303 ADGRG1Q9Y653 693 aa6.36□□□□□ -1.39
SNHG1-210ENST00000539303 TTC13Q8NBP0 860 aa6.35□□□□□ -1.39
SNHG1-210ENST00000539303 PXYLP1Q8TE99 480 aa6.35□□□□□ -1.39
SNHG1-210ENST00000539303 ZSWIM6Q9HCJ5 1215 aa6.35□□□□□ -1.39
SNHG1-210ENST00000539303 SUPT5HO00267 1087 aaKnown RBP6.34□□□□□ -1.39
SNHG1-210ENST00000539303 RIMBP2O15034 1052 aa6.34□□□□□ -1.39
SNHG1-210ENST00000539303 CDCA7LQ96GN5 454 aa6.34□□□□□ -1.39
SNHG1-210ENST00000539303 GPCPD1Q9NPB8 672 aa6.34□□□□□ -1.39
SNHG1-210ENST00000539303 SSTR3P32745 418 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-210ENST00000539303 CLCN1P35523 988 aa6.33□□□□□ -1.4
SNHG1-210ENST00000539303 PRSS12P56730 875 aa6.33□□□□□ -1.4
SNHG1-210ENST00000539303 ERICH6Q7L0X2 663 aa6.32□□□□□ -1.4
SNHG1-210ENST00000539303 CERKQ8TCT0 537 aa6.32□□□□□ -1.4
SNHG1-210ENST00000539303 FAM217BQ9NTX9 383 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-210ENST00000539303 TSKSQ9UJT2 592 aa6.32□□□□□ -1.4
SNHG1-210ENST00000539303 SNPHO15079 494 aa6.31□□□□□ -1.4
SNHG1-210ENST00000539303 PPP4R3BQ5MIZ7 849 aa6.31□□□□□ -1.4
SNHG1-210ENST00000539303 BEGAINQ9BUH8 593 aa6.31□□□□□ -1.4
SNHG1-210ENST00000539303 BCL2L12Q9HB09 334 aa6.31□□□□□ -1.4
SNHG1-210ENST00000539303 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
SNHG1-210ENST00000539303 DAXXQ9UER7 740 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-210ENST00000539303 OATP04181 439 aa6.3□□□□□ -1.4
SNHG1-210ENST00000539303 HOXB1P14653 301 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-210ENST00000539303 PROX2Q3B8N5 592 aa6.29□□□□□ -1.4
SNHG1-210ENST00000539303 PPP1R3GB7ZBB8 358 aa6.28□□□□□ -1.4
SNHG1-210ENST00000539303 SMAPO00193 183 aa6.28□□□□□ -1.4
SNHG1-210ENST00000539303 SH3D19Q5HYK7 790 aa6.28□□□□□ -1.4
SNHG1-210ENST00000539303 NUDT18Q6ZVK8 323 aa6.28□□□□□ -1.4
SNHG1-210ENST00000539303 PROCA1Q8NCQ7 364 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-210ENST00000539303 EYA1Q99502 592 aa6.28□□□□□ -1.4
SNHG1-210ENST00000539303 RCCD1A6NED2 376 aa6.27□□□□□ -1.41
SNHG1-210ENST00000539303 PTPREP23469 700 aa6.27□□□□□ -1.41
SNHG1-210ENST00000539303 FBXO31Q5XUX0 539 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-210ENST00000539303 RBM46Q8TBY0 533 aaKnown RBP6.27□□□□□ -1.41
SNHG1-210ENST00000539303 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-210ENST00000539303 KCNK17Q96T54 332 aa6.27□□□□□ -1.41
SNHG1-210ENST00000539303 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
SNHG1-210ENST00000539303 POLR3EQ9NVU0 708 aa6.27□□□□□ -1.41
SNHG1-210ENST00000539303 ONECUT3O60422 494 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-210ENST00000539303 PSEN2P49810 448 aa6.26□□□□□ -1.41
SNHG1-210ENST00000539303 MYSM1Q5VVJ2 828 aa6.26□□□□□ -1.41
SNHG1-210ENST00000539303 PNMA3Q9UL41 463 aa6.26□□□□□ -1.41
SNHG1-210ENST00000539303 TRIM6-TRIM34B2RNG4 842 aa6.25□□□□□ -1.41
SNHG1-210ENST00000539303 SKIV2LQ15477 1246 aaKnown RBP6.25□□□□□ -1.41
SNHG1-210ENST00000539303 POTEEQ6S8J3 1075 aa6.25□□□□□ -1.41
SNHG1-210ENST00000539303 TATDN2Q93075 761 aa6.25□□□□□ -1.41
SNHG1-210ENST00000539303 ZMYND15Q9H091 742 aa6.25□□□□□ -1.41
SNHG1-210ENST00000539303 PSDA5PKW4 1024 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-210ENST00000539303 TBC1D2Q9BYX2 928 aa6.24□□□□□ -1.41
SNHG1-210ENST00000539303 AXIN2Q9Y2T1 843 aa6.24□□□□□ -1.41
SNHG1-210ENST00000539303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.23□□□□□ -1.41
SNHG1-210ENST00000539303 CD46P15529 392 aa6.23□□□□□ -1.41
SNHG1-210ENST00000539303 LIMD1Q9UGP4 676 aa6.23□□□□□ -1.41
SNHG1-210ENST00000539303 ATP1B4Q9UN42 357 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-210ENST00000539303 DDX11L8A8MPP1 907 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 NBPF26B4DH59 902 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 VARS2Q5ST30 1063 aaKnown RBP6.22□□□□□ -1.41
SNHG1-210ENST00000539303 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 SPIRE2Q8WWL2 714 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 ZBED2Q9BTP6 218 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.22□□□□□ -1.41
SNHG1-210ENST00000539303 TMEM134Q9H6X4 195 aa6.22□□□□□ -1.41
SNHG1-210ENST00000539303 DNAJB2P25686 324 aa6.21□□□□□ -1.42
SNHG1-210ENST00000539303 CLK2P49760 499 aaKnown RBP6.21□□□□□ -1.42
SNHG1-210ENST00000539303 MARVELD3Q96A59 401 aa6.21□□□□□ -1.42
SNHG1-210ENST00000539303 CLUAP1Q96AJ1 413 aa6.21□□□□□ -1.42
SNHG1-210ENST00000539303 RSPH6AQ9H0K4 717 aa6.21□□□□□ -1.42
SNHG1-210ENST00000539303 C1orf115Q9H7X2 142 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms