RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 TSPY4P0CV99 314 aa37.65■■■■□ 3.62
RAP1B-218ENST00000538877 TSPY10P0CW01 314 aa37.65■■■■□ 3.62
RAP1B-218ENST00000538877 KANK4Q5T7N3 995 aaPredicted RBP37.65■■■■□ 3.62
RAP1B-218ENST00000538877 DNMT1P26358 1616 aaKnown RBP37.64■■■■□ 3.62
RAP1B-218ENST00000538877 MAST1Q9Y2H9 1570 aa37.63■■■■□ 3.62
RAP1B-218ENST00000538877 A2ML1A8K2U0 1454 aa37.63■■■■□ 3.61
RAP1B-218ENST00000538877 TCOF1Q13428 1488 aaKnown RBP37.63■■■■□ 3.61
RAP1B-218ENST00000538877 PZPP20742 1482 aa37.61■■■■□ 3.61
RAP1B-218ENST00000538877 MYOM3Q5VTT5 1437 aa37.59■■■■□ 3.61
RAP1B-218ENST00000538877 RNF17Q9BXT8 1623 aaKnown RBP37.58■■■■□ 3.61
RAP1B-218ENST00000538877 PKD2Q13563 968 aa37.58■■■■□ 3.61
RAP1B-218ENST00000538877 POLR1AO95602 1720 aaPredicted RBP37.58■■■■□ 3.61
RAP1B-218ENST00000538877 WASHC2CQ9Y4E1 1318 aa37.58■■■■□ 3.61
RAP1B-218ENST00000538877 TNRQ92752 1358 aa37.56■■■■□ 3.6
RAP1B-218ENST00000538877 FBXO31Q5XUX0 539 aaPredicted RBP37.56■■■■□ 3.6
RAP1B-218ENST00000538877 IQSEC2Q5JU85 1478 aa37.56■■■■□ 3.6
RAP1B-218ENST00000538877 MIA2Q96PC5 1412 aa37.55■■■■□ 3.6
RAP1B-218ENST00000538877 EIF2AK4Q9P2K8 1649 aaKnown RBP37.54■■■■□ 3.6
RAP1B-218ENST00000538877 ZNF335Q9H4Z2 1342 aaPredicted RBP37.52■■■■□ 3.6
RAP1B-218ENST00000538877 ZC3H13Q5T200 1668 aaKnown RBP37.51■■■■□ 3.6
RAP1B-218ENST00000538877 CROCC2H7BZ55 1655 aa37.47■■■■□ 3.59
RAP1B-218ENST00000538877 ABCC3O15438 1527 aa37.46■■■■□ 3.59
RAP1B-218ENST00000538877 CEP152O94986 1710 aa37.45■■■■□ 3.59
RAP1B-218ENST00000538877 NEURL4Q96JN8 1562 aa37.44■■■■□ 3.58
RAP1B-218ENST00000538877 CFAP65Q6ZU64 1925 aaKnown RBP37.44■■■■□ 3.58
RAP1B-218ENST00000538877 MROH1Q8NDA8 1641 aa37.43■■■■□ 3.58
RAP1B-218ENST00000538877 PTPN23Q9H3S7 1636 aa37.43■■■■□ 3.58
RAP1B-218ENST00000538877 NLRP1Q9C000 1473 aa37.4■■■■□ 3.58
RAP1B-218ENST00000538877 DUOX2Q9NRD8 1548 aa37.39■■■■□ 3.58
RAP1B-218ENST00000538877 APLP2Q06481 763 aa37.38■■■■□ 3.57
RAP1B-218ENST00000538877 UGGT1Q9NYU2 1555 aa37.38■■■■□ 3.57
RAP1B-218ENST00000538877 SPATA31D1Q6ZQQ2 1576 aa37.35■■■■□ 3.57
RAP1B-218ENST00000538877 SHANK2Q9UPX8 1470 aa37.33■■■■□ 3.57
RAP1B-218ENST00000538877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.33■■■■□ 3.576e-8■□□□□ 11.2
RAP1B-218ENST00000538877 ABCC5O15440 1437 aa37.31■■■■□ 3.56
RAP1B-218ENST00000538877 ERVK-7P63135 1459 aa37.3■■■■□ 3.56
RAP1B-218ENST00000538877 KIF15Q9NS87 1388 aa37.29■■■■□ 3.56
RAP1B-218ENST00000538877 DEPDC5O75140 1603 aa37.28■■■■□ 3.56
RAP1B-218ENST00000538877 THEMISQ8N1K5 641 aaPredicted RBP37.28■■■■□ 3.56
RAP1B-218ENST00000538877 PRDM15P57071 1507 aaPredicted RBP37.26■■■■□ 3.56
RAP1B-218ENST00000538877 ANKLE2Q86XL3 938 aa37.26■■■■□ 3.56
RAP1B-218ENST00000538877 FGD6Q6ZV73 1430 aa37.26■■■■□ 3.55
RAP1B-218ENST00000538877 UBAP1LF5GYI3 381 aa37.25■■■■□ 3.55
RAP1B-218ENST00000538877 DAPK1P53355 1430 aa37.25■■■■□ 3.55
RAP1B-218ENST00000538877 DISP3Q9P2K9 1392 aa37.24■■■■□ 3.55
RAP1B-218ENST00000538877 IQGAP1P46940 1657 aa37.24■■■■□ 3.55
RAP1B-218ENST00000538877 ERBINQ96RT1 1412 aa37.23■■■■□ 3.55
RAP1B-218ENST00000538877 RRP7BPQ9NSQ0 103 aa37.22■■■■□ 3.55
RAP1B-218ENST00000538877 CPS1P31327 1500 aa37.21■■■■□ 3.55
RAP1B-218ENST00000538877 UBR1Q8IWV7 1749 aa37.21■■■■□ 3.55
RAP1B-218ENST00000538877 MED14O60244 1454 aa37.2■■■■□ 3.54
RAP1B-218ENST00000538877 NPHP4O75161 1426 aaPredicted RBP37.19■■■■□ 3.54
RAP1B-218ENST00000538877 VWDEQ8N2E2 1590 aa37.19■■■■□ 3.54
RAP1B-218ENST00000538877 ARHGAP31Q2M1Z3 1444 aa37.1■■■■□ 3.53
RAP1B-218ENST00000538877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.09■■■■□ 3.53
RAP1B-218ENST00000538877 STRCP1A6NGW2 1772 aa37.09■■■■□ 3.53
RAP1B-218ENST00000538877 CHIC2Q9UKJ5 165 aa37.08■■■■□ 3.53
RAP1B-218ENST00000538877 ANKRD30AQ9BXX3 1397 aa37.07■■■■□ 3.53
RAP1B-218ENST00000538877 KANK1Q14678 1352 aa37.04■■■■□ 3.52
RAP1B-218ENST00000538877 PIK3C2BO00750 1634 aa37.03■■■■□ 3.52
RAP1B-218ENST00000538877 ILDR2Q71H61 639 aa37.01■■■■□ 3.52
RAP1B-218ENST00000538877 SCAF1Q9H7N4 1312 aaKnown RBP37.01■■■■□ 3.52
RAP1B-218ENST00000538877 SCAF11Q99590 1463 aaKnown RBP37.01■■■■□ 3.51
RAP1B-218ENST00000538877 SLIT1O75093 1534 aa36.98■■■■□ 3.51
RAP1B-218ENST00000538877 LMTK2Q8IWU2 1503 aa36.97■■■■□ 3.51
RAP1B-218ENST00000538877 ADGRL2O95490 1459 aa36.97■■■■□ 3.51
RAP1B-218ENST00000538877 ARHGAP23Q9P227 1491 aa36.97■■■■□ 3.51
RAP1B-218ENST00000538877 PIP4K2BP78356 416 aa36.97■■■■□ 3.51
RAP1B-218ENST00000538877 SYNMO15061 1565 aa36.96■■■■□ 3.51
RAP1B-218ENST00000538877 TOM1O60784 492 aa36.96■■■■□ 3.51
RAP1B-218ENST00000538877 FAM50AQ14320 339 aaKnown RBP36.94■■■■□ 3.5
RAP1B-218ENST00000538877 KDM5AP29375 1690 aaKnown RBP36.92■■■■□ 3.5
RAP1B-218ENST00000538877 EFCAB6Q5THR3 1501 aa36.91■■■■□ 3.5
RAP1B-218ENST00000538877 ALKQ9UM73 1620 aa36.9■■■■□ 3.5
RAP1B-218ENST00000538877 LTKP29376 864 aa36.9■■■■□ 3.5
RAP1B-218ENST00000538877 LRRC7Q96NW7 1537 aa36.9■■■■□ 3.5
RAP1B-218ENST00000538877 TXNDC2Q86VQ3 553 aa36.89■■■■□ 3.5
RAP1B-218ENST00000538877 HSPA1LP34931 641 aa36.86■■■■□ 3.49
RAP1B-218ENST00000538877 STAG3Q9UJ98 1225 aa36.84■■■■□ 3.49
RAP1B-218ENST00000538877 TMEM2Q9UHN6 1383 aa36.83■■■■□ 3.49
RAP1B-218ENST00000538877 EID1Q9Y6B2 187 aa36.83■■■■□ 3.49
RAP1B-218ENST00000538877 ANKRD50Q9ULJ7 1429 aa36.82■■■■□ 3.48
RAP1B-218ENST00000538877 XIRP1Q702N8 1843 aaKnown RBP36.81■■■■□ 3.48
RAP1B-218ENST00000538877 NOS1P29475 1434 aa36.79■■■■□ 3.48
RAP1B-218ENST00000538877 IDI1Q13907 227 aa36.79■■■■□ 3.48
RAP1B-218ENST00000538877 ADGRB3O60242 1522 aa36.78■■■■□ 3.48
RAP1B-218ENST00000538877 TET3O43151 1660 aa36.77■■■■□ 3.48
RAP1B-218ENST00000538877 MYO5BQ9ULV0 1848 aa36.76■■■■□ 3.48
RAP1B-218ENST00000538877 SOCS7O14512 581 aa36.75■■■■□ 3.47
RAP1B-218ENST00000538877 GCC2Q8IWJ2 1684 aa36.74■■■■□ 3.47
RAP1B-218ENST00000538877 MED1Q15648 1581 aaPredicted RBP36.74■■■■□ 3.47
RAP1B-218ENST00000538877 UNC13BO14795 1591 aa36.72■■■■□ 3.47
RAP1B-218ENST00000538877 RPRD2Q5VT52 1461 aaKnown RBP36.72■■■■□ 3.47
RAP1B-218ENST00000538877 SLC52A1Q9NWF4 448 aa36.64■■■■□ 3.46
RAP1B-218ENST00000538877 SENP3Q9H4L4 574 aaPredicted RBP36.63■■■■□ 3.45
RAP1B-218ENST00000538877 E9PCH4 1651 aa36.62■■■■□ 3.45
RAP1B-218ENST00000538877 ROCK1Q13464 1354 aa36.58■■■■□ 3.45
RAP1B-218ENST00000538877 SLC26A8Q96RN1 970 aa36.58■■■■□ 3.45
RAP1B-218ENST00000538877 TMEM131LA2VDJ0 1609 aa36.58■■■■□ 3.45
RAP1B-218ENST00000538877 IQGAP3Q86VI3 1631 aa36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms