RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 ATP7AQ04656 1500 aa17.22■□□□□ 0.35
TSPAN9-206ENST00000537971 KIF13AQ9H1H9 1805 aa17.22■□□□□ 0.35
TSPAN9-206ENST00000537971 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
TSPAN9-206ENST00000537971 HECW2Q9P2P5 1572 aa17.19■□□□□ 0.34
TSPAN9-206ENST00000537971 ABCC1P33527 1531 aa17.18■□□□□ 0.34
TSPAN9-206ENST00000537971 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
TSPAN9-206ENST00000537971 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
TSPAN9-206ENST00000537971 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
TSPAN9-206ENST00000537971 ABCC5O15440 1437 aa17.16■□□□□ 0.34
TSPAN9-206ENST00000537971 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
TSPAN9-206ENST00000537971 PTPRMP28827 1452 aa17.15■□□□□ 0.34
TSPAN9-206ENST00000537971 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
TSPAN9-206ENST00000537971 PREX2Q70Z35 1606 aa17.15■□□□□ 0.34
TSPAN9-206ENST00000537971 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
TSPAN9-206ENST00000537971 UBAP1LF5GYI3 381 aa17.13■□□□□ 0.33
TSPAN9-206ENST00000537971 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
TSPAN9-206ENST00000537971 TOM1O60784 492 aa17.13■□□□□ 0.33
TSPAN9-206ENST00000537971 POGKQ9P215 609 aa17.13■□□□□ 0.33
TSPAN9-206ENST00000537971 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
TSPAN9-206ENST00000537971 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
TSPAN9-206ENST00000537971 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
TSPAN9-206ENST00000537971 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
TSPAN9-206ENST00000537971 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
TSPAN9-206ENST00000537971 ATF3P18847 181 aa17.1■□□□□ 0.33
TSPAN9-206ENST00000537971 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
TSPAN9-206ENST00000537971 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
TSPAN9-206ENST00000537971 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
TSPAN9-206ENST00000537971 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
TSPAN9-206ENST00000537971 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
TSPAN9-206ENST00000537971 NCOA1Q15788 1441 aa17.08■□□□□ 0.32
TSPAN9-206ENST00000537971 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
TSPAN9-206ENST00000537971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN9-206ENST00000537971 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-206ENST00000537971 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
TSPAN9-206ENST00000537971 IDI1Q13907 227 aa17.05■□□□□ 0.32
TSPAN9-206ENST00000537971 STK26Q9P289 416 aa17.04■□□□□ 0.32
TSPAN9-206ENST00000537971 CCDC144AA2RUR9 1427 aa17.04■□□□□ 0.32
TSPAN9-206ENST00000537971 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
TSPAN9-206ENST00000537971 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
TSPAN9-206ENST00000537971 ZMYM4Q5VZL5 1548 aa17.03■□□□□ 0.32
TSPAN9-206ENST00000537971 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
TSPAN9-206ENST00000537971 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
TSPAN9-206ENST00000537971 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
TSPAN9-206ENST00000537971 FOXD1Q16676 465 aa17■□□□□ 0.31
TSPAN9-206ENST00000537971 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
TSPAN9-206ENST00000537971 TONSLQ96HA7 1378 aa17■□□□□ 0.31
TSPAN9-206ENST00000537971 NPATQ14207 1427 aa16.98■□□□□ 0.31
TSPAN9-206ENST00000537971 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
TSPAN9-206ENST00000537971 AGLP35573 1532 aa16.98■□□□□ 0.31
TSPAN9-206ENST00000537971 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
TSPAN9-206ENST00000537971 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
TSPAN9-206ENST00000537971 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
TSPAN9-206ENST00000537971 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
TSPAN9-206ENST00000537971 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.3
TSPAN9-206ENST00000537971 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
TSPAN9-206ENST00000537971 DIP2CQ9Y2E4 1556 aa16.95■□□□□ 0.3
TSPAN9-206ENST00000537971 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
TSPAN9-206ENST00000537971 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
TSPAN9-206ENST00000537971 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
TSPAN9-206ENST00000537971 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
TSPAN9-206ENST00000537971 KDM5CP41229 1560 aa16.93■□□□□ 0.3
TSPAN9-206ENST00000537971 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
TSPAN9-206ENST00000537971 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
TSPAN9-206ENST00000537971 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
TSPAN9-206ENST00000537971 MADDQ8WXG6 1647 aa16.92■□□□□ 0.3
TSPAN9-206ENST00000537971 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
TSPAN9-206ENST00000537971 STAC3Q96MF2 364 aa16.9■□□□□ 0.3
TSPAN9-206ENST00000537971 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
TSPAN9-206ENST00000537971 MSH6P52701 1360 aa16.89■□□□□ 0.29
TSPAN9-206ENST00000537971 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
TSPAN9-206ENST00000537971 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
TSPAN9-206ENST00000537971 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-206ENST00000537971 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
TSPAN9-206ENST00000537971 PZPP20742 1482 aa16.86■□□□□ 0.29
TSPAN9-206ENST00000537971 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
TSPAN9-206ENST00000537971 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
TSPAN9-206ENST00000537971 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
TSPAN9-206ENST00000537971 RICTORQ6R327 1708 aa16.86■□□□□ 0.29
TSPAN9-206ENST00000537971 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
TSPAN9-206ENST00000537971 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 A0A0G2JS52 829 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 KCNA6P17658 529 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
TSPAN9-206ENST00000537971 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.29
TSPAN9-206ENST00000537971 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
TSPAN9-206ENST00000537971 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 TMEM2Q9UHN6 1383 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 TBX22Q9Y458 520 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 BCORL1Q5H9F3 1711 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
TSPAN9-206ENST00000537971 ANKRD30BQ9BXX2 1392 aa16.81■□□□□ 0.28
TSPAN9-206ENST00000537971 NAIPQ13075 1403 aa16.81■□□□□ 0.28
TSPAN9-206ENST00000537971 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
TSPAN9-206ENST00000537971 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
TSPAN9-206ENST00000537971 ZBTB7CA1YPR0 619 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms