RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 WASHC2CQ9Y4E1 1318 aa35.61■■■■□ 3.29
CHFR-215ENST00000537551 HSPA2P54652 639 aa35.58■■■■□ 3.29
CHFR-215ENST00000537551 SETD1BQ9UPS6 1966 aaKnown RBP35.57■■■■□ 3.28
CHFR-215ENST00000537551 EIF2AK4Q9P2K8 1649 aaKnown RBP35.55■■■■□ 3.28
CHFR-215ENST00000537551 NCOA1Q15788 1441 aa35.55■■■■□ 3.28
CHFR-215ENST00000537551 UHRF1BP1Q6BDS2 1440 aa35.55■■■■□ 3.28
CHFR-215ENST00000537551 PREX1Q8TCU6 1659 aa35.54■■■■□ 3.28
CHFR-215ENST00000537551 ERBINQ96RT1 1412 aa35.53■■■■□ 3.28
CHFR-215ENST00000537551 KDM5DQ9BY66 1539 aa35.52■■■■□ 3.28
CHFR-215ENST00000537551 ITGAEP38570 1179 aa35.52■■■■□ 3.28
CHFR-215ENST00000537551 RNF17Q9BXT8 1623 aaKnown RBP35.5■■■■□ 3.27
CHFR-215ENST00000537551 NPATQ14207 1427 aa35.5■■■■□ 3.27
CHFR-215ENST00000537551 FAM135AQ9P2D6 1515 aa35.5■■■■□ 3.27
CHFR-215ENST00000537551 ADGRL2O95490 1459 aa35.49■■■■□ 3.27
CHFR-215ENST00000537551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.47■■■■□ 3.27
CHFR-215ENST00000537551 PTPRKQ15262 1439 aa35.47■■■■□ 3.27
CHFR-215ENST00000537551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.46■■■■□ 3.27
CHFR-215ENST00000537551 FBXO31Q5XUX0 539 aaPredicted RBP35.41■■■■□ 3.26
CHFR-215ENST00000537551 ABCC3O15438 1527 aa35.39■■■■□ 3.26
CHFR-215ENST00000537551 RRBP1Q9P2E9 1410 aaKnown RBP35.39■■■■□ 3.26
CHFR-215ENST00000537551 MROH1Q8NDA8 1641 aa35.39■■■■□ 3.26
CHFR-215ENST00000537551 PZPP20742 1482 aa35.37■■■■□ 3.25
CHFR-215ENST00000537551 ANKRD50Q9ULJ7 1429 aa35.37■■■■□ 3.25
CHFR-215ENST00000537551 KANK1Q14678 1352 aa35.37■■■■□ 3.25
CHFR-215ENST00000537551 ZC3H13Q5T200 1668 aaKnown RBP35.35■■■■□ 3.25
CHFR-215ENST00000537551 ROCK1Q13464 1354 aa35.35■■■■□ 3.25
CHFR-215ENST00000537551 PRDM15P57071 1507 aaPredicted RBP35.32■■■■□ 3.25
CHFR-215ENST00000537551 TNRQ92752 1358 aa35.32■■■■□ 3.24
CHFR-215ENST00000537551 CEP152O94986 1710 aa35.3■■■■□ 3.24
CHFR-215ENST00000537551 DEPDC5O75140 1603 aa35.29■■■■□ 3.24
CHFR-215ENST00000537551 MYO3AQ8NEV4 1616 aa35.27■■■■□ 3.24
CHFR-215ENST00000537551 CAMSAP1Q5T5Y3 1602 aa35.24■■■■□ 3.23
CHFR-215ENST00000537551 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
CHFR-215ENST00000537551 A2ML1A8K2U0 1454 aa35.19■■■■□ 3.22
CHFR-215ENST00000537551 DMRT2Q9Y5R5 561 aa35.19■■■■□ 3.22
CHFR-215ENST00000537551 ZNF142P52746 1687 aaPredicted RBP35.18■■■■□ 3.22
CHFR-215ENST00000537551 ARHGAP31Q2M1Z3 1444 aa35.18■■■■□ 3.22
CHFR-215ENST00000537551 ERVK-7P63135 1459 aa35.17■■■■□ 3.22
CHFR-215ENST00000537551 CFAP65Q6ZU64 1925 aaKnown RBP35.17■■■■□ 3.22
CHFR-215ENST00000537551 VWDEQ8N2E2 1590 aa35.16■■■■□ 3.22
CHFR-215ENST00000537551 SPATA31D1Q6ZQQ2 1576 aa35.15■■■■□ 3.22
CHFR-215ENST00000537551 LMTK2Q8IWU2 1503 aa35.15■■■■□ 3.22
CHFR-215ENST00000537551 STRCQ7RTU9 1775 aa35.14■■■■□ 3.22
CHFR-215ENST00000537551 NLRP1Q9C000 1473 aa35.13■■■■□ 3.21
CHFR-215ENST00000537551 NCKAP5LQ9HCH0 1330 aa35.09■■■■□ 3.21
CHFR-215ENST00000537551 THEMISQ8N1K5 641 aaPredicted RBP35.08■■■■□ 3.21
CHFR-215ENST00000537551 UNC13BO14795 1591 aa35.07■■■■□ 3.2
CHFR-215ENST00000537551 PLA2R1Q13018 1463 aa35.05■■■■□ 3.2
CHFR-215ENST00000537551 NUP155O75694 1391 aa35.05■■■■□ 3.2
CHFR-215ENST00000537551 PKD2Q13563 968 aa35.05■■■■□ 3.2
CHFR-215ENST00000537551 UGGT1Q9NYU2 1555 aa35.04■■■■□ 3.2
CHFR-215ENST00000537551 EFCAB6Q5THR3 1501 aa35.03■■■■□ 3.2
CHFR-215ENST00000537551 PTPRTO14522 1441 aa35.02■■■■□ 3.2
CHFR-215ENST00000537551 NAIPQ13075 1403 aa35.01■■■■□ 3.2
CHFR-215ENST00000537551 TET3O43151 1660 aa34.98■■■■□ 3.19
CHFR-215ENST00000537551 ANKLE2Q86XL3 938 aa34.96■■■■□ 3.19
CHFR-215ENST00000537551 STAG3Q9UJ98 1225 aa34.96■■■■□ 3.19
CHFR-215ENST00000537551 RPRD2Q5VT52 1461 aaKnown RBP34.95■■■■□ 3.19
CHFR-215ENST00000537551 HFM1A2PYH4 1435 aa34.94■■■■□ 3.18
CHFR-215ENST00000537551 IQGAP3Q86VI3 1631 aa34.94■■■■□ 3.18
CHFR-215ENST00000537551 NOS1P29475 1434 aa34.93■■■■□ 3.18
CHFR-215ENST00000537551 GCC2Q8IWJ2 1684 aa34.92■■■■□ 3.18
CHFR-215ENST00000537551 IDI1Q13907 227 aa34.92■■■■□ 3.18
CHFR-215ENST00000537551 SLC52A1Q9NWF4 448 aa34.89■■■■□ 3.18
CHFR-215ENST00000537551 TRIM52Q96A61 297 aa34.88■■■■□ 3.17
CHFR-215ENST00000537551 SYNMO15061 1565 aa34.87■■■■□ 3.17
CHFR-215ENST00000537551 UBR1Q8IWV7 1749 aa34.86■■■■□ 3.17
CHFR-215ENST00000537551 PIK3C2BO00750 1634 aa34.84■■■■□ 3.17
CHFR-215ENST00000537551 E9PCH4 1651 aa34.83■■■■□ 3.17
CHFR-215ENST00000537551 POLR1AO95602 1720 aaPredicted RBP34.82■■■■□ 3.16
CHFR-215ENST00000537551 CERKQ8TCT0 537 aa34.8■■■■□ 3.16
CHFR-215ENST00000537551 TXNDC2Q86VQ3 553 aa34.78■■■■□ 3.16
CHFR-215ENST00000537551 EID1Q9Y6B2 187 aa34.78■■■■□ 3.16
CHFR-215ENST00000537551 NEURL4Q96JN8 1562 aa34.77■■■■□ 3.16
CHFR-215ENST00000537551 NPHP4O75161 1426 aaPredicted RBP34.76■■■■□ 3.16
CHFR-215ENST00000537551 CHGAP10645 457 aaKnown RBP34.74■■■■□ 3.15
CHFR-215ENST00000537551 ZNF335Q9H4Z2 1342 aaPredicted RBP34.74■■■■□ 3.15
CHFR-215ENST00000537551 TMEM2Q9UHN6 1383 aa34.74■■■■□ 3.15
CHFR-215ENST00000537551 LTKP29376 864 aa34.73■■■■□ 3.15
CHFR-215ENST00000537551 MED14O60244 1454 aa34.72■■■■□ 3.15
CHFR-215ENST00000537551 ARHGAP23Q9P227 1491 aa34.72■■■■□ 3.15
CHFR-215ENST00000537551 SLIT1O75093 1534 aa34.72■■■■□ 3.15
CHFR-215ENST00000537551 ILDR1Q86SU0 546 aaPredicted RBP34.72■■■■□ 3.15
CHFR-215ENST00000537551 SCAF11Q99590 1463 aaKnown RBP34.71■■■■□ 3.15
CHFR-215ENST00000537551 SLC4A1APQ9BWU0 796 aaKnown RBP34.71■■■■□ 3.15
CHFR-215ENST00000537551 ADGRB3O60242 1522 aa34.71■■■■□ 3.15
CHFR-215ENST00000537551 KDM5AP29375 1690 aaKnown RBP34.7■■■■□ 3.15
CHFR-215ENST00000537551 FBXO41Q8TF61 875 aa34.67■■■■□ 3.14
CHFR-215ENST00000537551 LTBP4Q8N2S1 1624 aa34.66■■■■□ 3.14
CHFR-215ENST00000537551 SETD5Q9C0A6 1442 aa34.65■■■■□ 3.14
CHFR-215ENST00000537551 IQGAP1P46940 1657 aa34.65■■■■□ 3.14
CHFR-215ENST00000537551 HDGFP51858 240 aaKnown RBP34.61■■■■□ 3.13
CHFR-215ENST00000537551 SPHKAPQ2M3C7 1700 aa34.6■■■■□ 3.13
CHFR-215ENST00000537551 TMEM131LA2VDJ0 1609 aa34.59■■■■□ 3.13
CHFR-215ENST00000537551 ACIN1Q9UKV3 1341 aaKnown RBP34.58■■■■□ 3.13
CHFR-215ENST00000537551 BCANQ96GW7 911 aa34.57■■■■□ 3.12
CHFR-215ENST00000537551 MYO5BQ9ULV0 1848 aa34.56■■■■□ 3.12
CHFR-215ENST00000537551 PPP1R15AO75807 674 aaPredicted RBP34.56■■■■□ 3.12
CHFR-215ENST00000537551 RIMS2Q9UQ26 1411 aa34.55■■■■□ 3.12
CHFR-215ENST00000537551 MPHOSPH9Q99550 1183 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms