RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
CDH20-202ENST00000536675 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
CDH20-202ENST00000536675 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
CDH20-202ENST00000536675 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
CDH20-202ENST00000536675 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
CDH20-202ENST00000536675 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
CDH20-202ENST00000536675 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
CDH20-202ENST00000536675 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
CDH20-202ENST00000536675 PLIN1O60240 522 aa19.17■□□□□ 0.66
CDH20-202ENST00000536675 NUP155O75694 1391 aa19.15■□□□□ 0.66
CDH20-202ENST00000536675 DCAF11Q8TEB1 546 aa19.14■□□□□ 0.65
CDH20-202ENST00000536675 CRBNQ96SW2 442 aa19.14■□□□□ 0.65
CDH20-202ENST00000536675 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
CDH20-202ENST00000536675 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
CDH20-202ENST00000536675 ADCY10Q96PN6 1610 aa19.12■□□□□ 0.65
CDH20-202ENST00000536675 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
CDH20-202ENST00000536675 BLMP54132 1417 aaPredicted RBP19.09■□□□□ 0.65
CDH20-202ENST00000536675 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
CDH20-202ENST00000536675 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
CDH20-202ENST00000536675 GSE1Q14687 1217 aa19.07■□□□□ 0.64
CDH20-202ENST00000536675 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
CDH20-202ENST00000536675 NFKBIBQ15653 356 aa19.07■□□□□ 0.64
CDH20-202ENST00000536675 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
CDH20-202ENST00000536675 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
CDH20-202ENST00000536675 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
CDH20-202ENST00000536675 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
CDH20-202ENST00000536675 INSRP06213 1382 aa19.05■□□□□ 0.64
CDH20-202ENST00000536675 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
CDH20-202ENST00000536675 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
CDH20-202ENST00000536675 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
CDH20-202ENST00000536675 ZMYM4Q5VZL5 1548 aa19.04■□□□□ 0.64
CDH20-202ENST00000536675 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
CDH20-202ENST00000536675 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
CDH20-202ENST00000536675 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
CDH20-202ENST00000536675 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
CDH20-202ENST00000536675 PTPRGP23470 1445 aa19.02■□□□□ 0.64
CDH20-202ENST00000536675 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
CDH20-202ENST00000536675 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
CDH20-202ENST00000536675 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
CDH20-202ENST00000536675 COL17A1Q9UMD9 1497 aaPredicted RBP19■□□□□ 0.63
CDH20-202ENST00000536675 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
CDH20-202ENST00000536675 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
CDH20-202ENST00000536675 CENPQQ7L2Z9 268 aaPredicted RBP18.98■□□□□ 0.63
CDH20-202ENST00000536675 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
CDH20-202ENST00000536675 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
CDH20-202ENST00000536675 PANK3Q9H999 370 aa18.97■□□□□ 0.63
CDH20-202ENST00000536675 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
CDH20-202ENST00000536675 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
CDH20-202ENST00000536675 TSPY4P0CV99 314 aa18.96■□□□□ 0.63
CDH20-202ENST00000536675 TSPY10P0CW01 314 aa18.96■□□□□ 0.63
CDH20-202ENST00000536675 FAM161AQ3B820 660 aa18.96■□□□□ 0.63
CDH20-202ENST00000536675 TESK2Q96S53 571 aa18.95■□□□□ 0.62
CDH20-202ENST00000536675 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
CDH20-202ENST00000536675 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
CDH20-202ENST00000536675 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
CDH20-202ENST00000536675 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
CDH20-202ENST00000536675 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
CDH20-202ENST00000536675 PRDM15P57071 1507 aaPredicted RBP18.94■□□□□ 0.62
CDH20-202ENST00000536675 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
CDH20-202ENST00000536675 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
CDH20-202ENST00000536675 LAMC1P11047 1609 aa18.94■□□□□ 0.62
CDH20-202ENST00000536675 CCDC144AA2RUR9 1427 aa18.92■□□□□ 0.62
CDH20-202ENST00000536675 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
CDH20-202ENST00000536675 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDH20-202ENST00000536675 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
CDH20-202ENST00000536675 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
CDH20-202ENST00000536675 PLEKHH1Q9ULM0 1364 aa18.91■□□□□ 0.62
CDH20-202ENST00000536675 A2MP01023 1474 aa18.91■□□□□ 0.62
CDH20-202ENST00000536675 MYO5CQ9NQX4 1742 aa18.9■□□□□ 0.62
CDH20-202ENST00000536675 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
CDH20-202ENST00000536675 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
CDH20-202ENST00000536675 ARHGEF5Q12774 1597 aa18.89■□□□□ 0.61
CDH20-202ENST00000536675 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
CDH20-202ENST00000536675 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
CDH20-202ENST00000536675 RGS3P49796 1198 aa18.87■□□□□ 0.61
CDH20-202ENST00000536675 TMF1P82094 1093 aa18.87■□□□□ 0.61
CDH20-202ENST00000536675 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
CDH20-202ENST00000536675 ABCA8O94911 1581 aa18.86■□□□□ 0.61
CDH20-202ENST00000536675 GOLGA2Q08379 1002 aa18.84■□□□□ 0.61
CDH20-202ENST00000536675 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
CDH20-202ENST00000536675 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
CDH20-202ENST00000536675 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDH20-202ENST00000536675 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
CDH20-202ENST00000536675 PPP2R1AP30153 589 aa18.83■□□□□ 0.61
CDH20-202ENST00000536675 ATP10BO94823 1461 aa18.83■□□□□ 0.61
CDH20-202ENST00000536675 CARMIL2Q6F5E8 1435 aa18.82■□□□□ 0.6
CDH20-202ENST00000536675 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
CDH20-202ENST00000536675 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
CDH20-202ENST00000536675 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
CDH20-202ENST00000536675 SLFN5Q08AF3 891 aa18.8■□□□□ 0.6
CDH20-202ENST00000536675 WDR7Q9Y4E6 1490 aa18.8■□□□□ 0.6
CDH20-202ENST00000536675 SAMD9LQ8IVG5 1584 aa18.8■□□□□ 0.6
CDH20-202ENST00000536675 UNC13BO14795 1591 aa18.8■□□□□ 0.6
CDH20-202ENST00000536675 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
CDH20-202ENST00000536675 CDC42BPBQ9Y5S2 1711 aa18.79■□□□□ 0.6
CDH20-202ENST00000536675 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
CDH20-202ENST00000536675 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
CDH20-202ENST00000536675 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
CDH20-202ENST00000536675 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
CDH20-202ENST00000536675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms