RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
CHRNB1-202ENST00000536404 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
CHRNB1-202ENST00000536404 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
CHRNB1-202ENST00000536404 PTPRTO14522 1441 aa17.09■□□□□ 0.33
CHRNB1-202ENST00000536404 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
CHRNB1-202ENST00000536404 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
CHRNB1-202ENST00000536404 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.32
CHRNB1-202ENST00000536404 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
CHRNB1-202ENST00000536404 FBXO31Q5XUX0 539 aaPredicted RBP17.06■□□□□ 0.32
CHRNB1-202ENST00000536404 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
CHRNB1-202ENST00000536404 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
CHRNB1-202ENST00000536404 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
CHRNB1-202ENST00000536404 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
CHRNB1-202ENST00000536404 APLP2Q06481 763 aa17.02■□□□□ 0.31
CHRNB1-202ENST00000536404 NEUROD1Q13562 356 aa17.02■□□□□ 0.31
CHRNB1-202ENST00000536404 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.31
CHRNB1-202ENST00000536404 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
CHRNB1-202ENST00000536404 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
CHRNB1-202ENST00000536404 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
CHRNB1-202ENST00000536404 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
CHRNB1-202ENST00000536404 TNRQ92752 1358 aa17■□□□□ 0.31
CHRNB1-202ENST00000536404 PKD2Q13563 968 aa16.99■□□□□ 0.31
CHRNB1-202ENST00000536404 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
CHRNB1-202ENST00000536404 A2ML1A8K2U0 1454 aa16.98■□□□□ 0.31
CHRNB1-202ENST00000536404 PZPP20742 1482 aa16.98■□□□□ 0.31
CHRNB1-202ENST00000536404 PLA2R1Q13018 1463 aa16.98■□□□□ 0.31
CHRNB1-202ENST00000536404 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
CHRNB1-202ENST00000536404 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
CHRNB1-202ENST00000536404 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
CHRNB1-202ENST00000536404 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
CHRNB1-202ENST00000536404 ABCC5O15440 1437 aa16.95■□□□□ 0.3
CHRNB1-202ENST00000536404 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
CHRNB1-202ENST00000536404 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
CHRNB1-202ENST00000536404 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
CHRNB1-202ENST00000536404 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
CHRNB1-202ENST00000536404 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
CHRNB1-202ENST00000536404 ABCC3O15438 1527 aa16.92■□□□□ 0.3
CHRNB1-202ENST00000536404 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
CHRNB1-202ENST00000536404 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
CHRNB1-202ENST00000536404 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
CHRNB1-202ENST00000536404 MROH1Q8NDA8 1641 aa16.91■□□□□ 0.3
CHRNB1-202ENST00000536404 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
CHRNB1-202ENST00000536404 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
CHRNB1-202ENST00000536404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHRNB1-202ENST00000536404 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
CHRNB1-202ENST00000536404 DAPK1P53355 1430 aa16.89■□□□□ 0.29
CHRNB1-202ENST00000536404 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
CHRNB1-202ENST00000536404 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
CHRNB1-202ENST00000536404 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
CHRNB1-202ENST00000536404 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
CHRNB1-202ENST00000536404 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
CHRNB1-202ENST00000536404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHRNB1-202ENST00000536404 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
CHRNB1-202ENST00000536404 IQSEC2Q5JU85 1478 aa16.87■□□□□ 0.29
CHRNB1-202ENST00000536404 CEP152O94986 1710 aa16.86■□□□□ 0.29
CHRNB1-202ENST00000536404 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
CHRNB1-202ENST00000536404 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
CHRNB1-202ENST00000536404 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
CHRNB1-202ENST00000536404 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
CHRNB1-202ENST00000536404 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
CHRNB1-202ENST00000536404 ERBINQ96RT1 1412 aa16.84■□□□□ 0.29
CHRNB1-202ENST00000536404 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
CHRNB1-202ENST00000536404 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
CHRNB1-202ENST00000536404 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
CHRNB1-202ENST00000536404 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
CHRNB1-202ENST00000536404 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
CHRNB1-202ENST00000536404 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
CHRNB1-202ENST00000536404 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
CHRNB1-202ENST00000536404 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
CHRNB1-202ENST00000536404 MED14O60244 1454 aa16.78■□□□□ 0.28
CHRNB1-202ENST00000536404 KANK1Q14678 1352 aa16.78■□□□□ 0.28
CHRNB1-202ENST00000536404 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
CHRNB1-202ENST00000536404 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
CHRNB1-202ENST00000536404 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
CHRNB1-202ENST00000536404 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
CHRNB1-202ENST00000536404 LTKP29376 864 aa16.74■□□□□ 0.27
CHRNB1-202ENST00000536404 CPS1P31327 1500 aa16.74■□□□□ 0.27
CHRNB1-202ENST00000536404 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
CHRNB1-202ENST00000536404 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
CHRNB1-202ENST00000536404 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
CHRNB1-202ENST00000536404 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
CHRNB1-202ENST00000536404 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
CHRNB1-202ENST00000536404 IDI1Q13907 227 aa16.72■□□□□ 0.27
CHRNB1-202ENST00000536404 SCAF11Q99590 1463 aaKnown RBP16.7■□□□□ 0.26
CHRNB1-202ENST00000536404 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
CHRNB1-202ENST00000536404 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
CHRNB1-202ENST00000536404 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
CHRNB1-202ENST00000536404 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
CHRNB1-202ENST00000536404 ANKRD50Q9ULJ7 1429 aa16.69■□□□□ 0.26
CHRNB1-202ENST00000536404 TOM1O60784 492 aa16.69■□□□□ 0.26
CHRNB1-202ENST00000536404 SLIT1O75093 1534 aa16.69■□□□□ 0.26
CHRNB1-202ENST00000536404 STRCP1A6NGW2 1772 aa16.69■□□□□ 0.26
CHRNB1-202ENST00000536404 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
CHRNB1-202ENST00000536404 SYNMO15061 1565 aa16.67■□□□□ 0.26
CHRNB1-202ENST00000536404 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
CHRNB1-202ENST00000536404 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
CHRNB1-202ENST00000536404 NOS1P29475 1434 aa16.67■□□□□ 0.26
CHRNB1-202ENST00000536404 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
CHRNB1-202ENST00000536404 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
CHRNB1-202ENST00000536404 HSPA1LP34931 641 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms