RNA–Protein interactions for RNA: ENST00000535979.5

CDK2AP1-203, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-203ENST00000535979 MYO3AQ8NEV4 1616 aa43.79■■■■■ 4.6
CDK2AP1-203ENST00000535979 SHANK2Q9UPX8 1470 aa43.78■■■■■ 4.6
CDK2AP1-203ENST00000535979 ZNF142P52746 1687 aaPredicted RBP43.78■■■■■ 4.6
CDK2AP1-203ENST00000535979 RNF17Q9BXT8 1623 aaKnown RBP43.77■■■■■ 4.6
CDK2AP1-203ENST00000535979 TCOF1Q13428 1488 aaKnown RBP43.76■■■■■ 4.6
CDK2AP1-203ENST00000535979 DNMT1P26358 1616 aaKnown RBP43.73■■■■■ 4.59
CDK2AP1-203ENST00000535979 WASHC2CQ9Y4E1 1318 aa43.73■■■■■ 4.59
CDK2AP1-203ENST00000535979 DUOX2Q9NRD8 1548 aa43.72■■■■■ 4.59
CDK2AP1-203ENST00000535979 ABCC5O15440 1437 aa43.71■■■■■ 4.59
CDK2AP1-203ENST00000535979 ZC3H13Q5T200 1668 aaKnown RBP43.68■■■■■ 4.58
CDK2AP1-203ENST00000535979 CEP170BQ9Y4F5 1589 aaPredicted RBP43.67■■■■■ 4.58
CDK2AP1-203ENST00000535979 DAPK1P53355 1430 aa43.67■■■■■ 4.58
CDK2AP1-203ENST00000535979 PZPP20742 1482 aa43.67■■■■■ 4.58
CDK2AP1-203ENST00000535979 CAMSAP1Q5T5Y3 1602 aa43.66■■■■■ 4.58
CDK2AP1-203ENST00000535979 NCOA1Q15788 1441 aa43.66■■■■■ 4.58
CDK2AP1-203ENST00000535979 PTPRTO14522 1441 aa43.63■■■■■ 4.57
CDK2AP1-203ENST00000535979 FBXO41Q8TF61 875 aa43.62■■■■■ 4.57
CDK2AP1-203ENST00000535979 KIF15Q9NS87 1388 aa43.62■■■■■ 4.57
CDK2AP1-203ENST00000535979 ERBINQ96RT1 1412 aa43.57■■■■■ 4.57
CDK2AP1-203ENST00000535979 ABCC3O15438 1527 aa43.57■■■■■ 4.56
CDK2AP1-203ENST00000535979 MROH1Q8NDA8 1641 aa43.56■■■■■ 4.56
CDK2AP1-203ENST00000535979 A2ML1A8K2U0 1454 aa43.56■■■■■ 4.56
CDK2AP1-203ENST00000535979 PLA2R1Q13018 1463 aa43.55■■■■■ 4.56
CDK2AP1-203ENST00000535979 TNRQ92752 1358 aa43.54■■■■■ 4.56
CDK2AP1-203ENST00000535979 RRP7BPQ9NSQ0 103 aa43.52■■■■■ 4.56
CDK2AP1-203ENST00000535979 FBXO31Q5XUX0 539 aaPredicted RBP43.51■■■■■ 4.56
CDK2AP1-203ENST00000535979 ANKRD30AQ9BXX3 1397 aa43.5■■■■■ 4.55
CDK2AP1-203ENST00000535979 CEP152O94986 1710 aa43.5■■■■■ 4.55
CDK2AP1-203ENST00000535979 CERKQ8TCT0 537 aa43.48■■■■■ 4.55
CDK2AP1-203ENST00000535979 PRDM15P57071 1507 aaPredicted RBP43.47■■■■■ 4.55
CDK2AP1-203ENST00000535979 PKD2Q13563 968 aa43.44■■■■■ 4.54
CDK2AP1-203ENST00000535979 DEPDC5O75140 1603 aa43.44■■■■■ 4.54
CDK2AP1-203ENST00000535979 FAM50AQ14320 339 aaKnown RBP43.43■■■■■ 4.54
CDK2AP1-203ENST00000535979 NLRP1Q9C000 1473 aa43.43■■■■■ 4.54
CDK2AP1-203ENST00000535979 CHIC2Q9UKJ5 165 aa43.42■■■■■ 4.54
CDK2AP1-203ENST00000535979 ADGRL2O95490 1459 aa43.4■■■■■ 4.54
CDK2AP1-203ENST00000535979 SPATA31D1Q6ZQQ2 1576 aa43.39■■■■■ 4.54
CDK2AP1-203ENST00000535979 NCKAP5LQ9HCH0 1330 aa43.39■■■■■ 4.54
CDK2AP1-203ENST00000535979 CFAP65Q6ZU64 1925 aaKnown RBP43.35■■■■■ 4.53
CDK2AP1-203ENST00000535979 POLR1AO95602 1720 aaPredicted RBP43.34■■■■■ 4.53
CDK2AP1-203ENST00000535979 ERVK-7P63135 1459 aa43.32■■■■■ 4.53
CDK2AP1-203ENST00000535979 KANK1Q14678 1352 aa43.31■■■■■ 4.52
CDK2AP1-203ENST00000535979 UGGT1Q9NYU2 1555 aa43.3■■■■■ 4.52
CDK2AP1-203ENST00000535979 ARHGAP31Q2M1Z3 1444 aa43.29■■■■■ 4.52
CDK2AP1-203ENST00000535979 THEMISQ8N1K5 641 aaPredicted RBP43.27■■■■■ 4.52
CDK2AP1-203ENST00000535979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.26■■■■■ 4.52
CDK2AP1-203ENST00000535979 LTBP4Q8N2S1 1624 aa43.26■■■■■ 4.52
CDK2AP1-203ENST00000535979 VWDEQ8N2E2 1590 aa43.21■■■■■ 4.51
CDK2AP1-203ENST00000535979 LMTK2Q8IWU2 1503 aa43.2■■■■■ 4.51
CDK2AP1-203ENST00000535979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.17■■■■■ 4.5
CDK2AP1-203ENST00000535979 NEURL4Q96JN8 1562 aa43.16■■■■■ 4.5
CDK2AP1-203ENST00000535979 ANKRD50Q9ULJ7 1429 aa43.16■■■■■ 4.5
CDK2AP1-203ENST00000535979 ANKLE2Q86XL3 938 aa43.15■■■■■ 4.5
CDK2AP1-203ENST00000535979 IQSEC2Q5JU85 1478 aa43.14■■■■■ 4.5
CDK2AP1-203ENST00000535979 UBR1Q8IWV7 1749 aa43.13■■■■■ 4.49
CDK2AP1-203ENST00000535979 ROCK1Q13464 1354 aa43.09■■■■■ 4.49
CDK2AP1-203ENST00000535979 ZNF335Q9H4Z2 1342 aaPredicted RBP43.08■■■■■ 4.49
CDK2AP1-203ENST00000535979 PPARGC1BQ86YN6 1023 aaKnown RBP43.08■■■■■ 4.49
CDK2AP1-203ENST00000535979 EFCAB6Q5THR3 1501 aa43.07■■■■■ 4.49
CDK2AP1-203ENST00000535979 MED14O60244 1454 aa43.06■■■■■ 4.48
CDK2AP1-203ENST00000535979 IQGAP1P46940 1657 aa43.01■■■■■ 4.48
CDK2AP1-203ENST00000535979 UNC13BO14795 1591 aa42.99■■■■■ 4.47
CDK2AP1-203ENST00000535979 NPHP4O75161 1426 aaPredicted RBP42.99■■■■■ 4.47
CDK2AP1-203ENST00000535979 KDM5AP29375 1690 aaKnown RBP42.98■■■■■ 4.47
CDK2AP1-203ENST00000535979 PIK3C2BO00750 1634 aa42.97■■■■■ 4.47
CDK2AP1-203ENST00000535979 TET3O43151 1660 aa42.96■■■■■ 4.47
CDK2AP1-203ENST00000535979 RPRD2Q5VT52 1461 aaKnown RBP42.95■■■■■ 4.47
CDK2AP1-203ENST00000535979 GCC2Q8IWJ2 1684 aa42.93■■■■■ 4.46
CDK2AP1-203ENST00000535979 SLIT1O75093 1534 aa42.92■■■■■ 4.46
CDK2AP1-203ENST00000535979 SYNMO15061 1565 aa42.91■■■■■ 4.46
CDK2AP1-203ENST00000535979 ITGAEP38570 1179 aa42.91■■■■■ 4.46
CDK2AP1-203ENST00000535979 NOS1P29475 1434 aa42.9■■■■■ 4.46
CDK2AP1-203ENST00000535979 ARHGAP23Q9P227 1491 aa42.89■■■■■ 4.46
CDK2AP1-203ENST00000535979 CPS1P31327 1500 aa42.89■■■■■ 4.46
CDK2AP1-203ENST00000535979 SCAF11Q99590 1463 aaKnown RBP42.88■■■■■ 4.46
CDK2AP1-203ENST00000535979 RRBP1Q9P2E9 1410 aaKnown RBP42.86■■■■■ 4.45
CDK2AP1-203ENST00000535979 STAG3Q9UJ98 1225 aa42.85■■■■■ 4.45
CDK2AP1-203ENST00000535979 IQGAP3Q86VI3 1631 aa42.83■■■■■ 4.45
CDK2AP1-203ENST00000535979 IDI1Q13907 227 aa42.82■■■■■ 4.45
CDK2AP1-203ENST00000535979 SLC52A1Q9NWF4 448 aa42.81■■■■■ 4.44
CDK2AP1-203ENST00000535979 EID1Q9Y6B2 187 aa42.81■■■■■ 4.44
CDK2AP1-203ENST00000535979 TMEM2Q9UHN6 1383 aa42.78■■■■■ 4.44
CDK2AP1-203ENST00000535979 TXNDC2Q86VQ3 553 aa42.78■■■■■ 4.44
CDK2AP1-203ENST00000535979 ADGRB3O60242 1522 aa42.77■■■■■ 4.44
CDK2AP1-203ENST00000535979 LTKP29376 864 aa42.75■■■■■ 4.43
CDK2AP1-203ENST00000535979 E9PCH4 1651 aa42.75■■■■■ 4.43
CDK2AP1-203ENST00000535979 NUP155O75694 1391 aa42.69■■■■■ 4.42
CDK2AP1-203ENST00000535979 UBAP1LF5GYI3 381 aa42.69■■■■■ 4.42
CDK2AP1-203ENST00000535979 STRCP1A6NGW2 1772 aa42.67■■■■■ 4.42
CDK2AP1-203ENST00000535979 MYO5BQ9ULV0 1848 aa42.64■■■■■ 4.42
CDK2AP1-203ENST00000535979 TMEM131LA2VDJ0 1609 aa42.59■■■■■ 4.41
CDK2AP1-203ENST00000535979 NAIPQ13075 1403 aa42.54■■■■■ 4.4
CDK2AP1-203ENST00000535979 TOM1O60784 492 aa42.53■■■■■ 4.4
CDK2AP1-203ENST00000535979 LRRC7Q96NW7 1537 aa42.52■■■■■ 4.4
CDK2AP1-203ENST00000535979 HDGFP51858 240 aaKnown RBP42.49■■■■■ 4.39
CDK2AP1-203ENST00000535979 SPHKAPQ2M3C7 1700 aa42.49■■■■■ 4.39
CDK2AP1-203ENST00000535979 ZFYVE9O95405 1425 aa42.48■■■■■ 4.39
CDK2AP1-203ENST00000535979 HFM1A2PYH4 1435 aa42.45■■■■■ 4.39
CDK2AP1-203ENST00000535979 RIMS2Q9UQ26 1411 aa42.44■■■■■ 4.38
CDK2AP1-203ENST00000535979 CHGAP10645 457 aaKnown RBP42.42■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms