RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
DDB1-207ENST00000535967 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
DDB1-207ENST00000535967 HNRNPMP52272 730 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDB1-207ENST00000535967 CAMSAP1Q5T5Y3 1602 aa19.66■□□□□ 0.74
DDB1-207ENST00000535967 CROCC2H7BZ55 1655 aa19.66■□□□□ 0.74
DDB1-207ENST00000535967 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
DDB1-207ENST00000535967 ATP7AQ04656 1500 aa19.64■□□□□ 0.74
DDB1-207ENST00000535967 PLXNC1O60486 1568 aa19.64■□□□□ 0.74
DDB1-207ENST00000535967 CLTCQ00610 1675 aaKnown RBP19.64■□□□□ 0.73
DDB1-207ENST00000535967 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
DDB1-207ENST00000535967 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
DDB1-207ENST00000535967 ZMYM3Q14202 1370 aa19.63■□□□□ 0.73
DDB1-207ENST00000535967 NPATQ14207 1427 aa19.63■□□□□ 0.73
DDB1-207ENST00000535967 TCOF1Q13428 1488 aaKnown RBP19.62■□□□□ 0.73
DDB1-207ENST00000535967 MYO3AQ8NEV4 1616 aa19.61■□□□□ 0.73
DDB1-207ENST00000535967 CCDC141Q6ZP82 1450 aa19.61■□□□□ 0.73
DDB1-207ENST00000535967 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
DDB1-207ENST00000535967 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
DDB1-207ENST00000535967 SPATA31D1Q6ZQQ2 1576 aa19.59■□□□□ 0.73
DDB1-207ENST00000535967 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
DDB1-207ENST00000535967 NCKAP5LQ9HCH0 1330 aa19.59■□□□□ 0.73
DDB1-207ENST00000535967 A2MP01023 1474 aa19.58■□□□□ 0.73
DDB1-207ENST00000535967 ADGBQ8N7X0 1667 aa19.58■□□□□ 0.73
DDB1-207ENST00000535967 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.72
DDB1-207ENST00000535967 IQSEC2Q5JU85 1478 aa19.57■□□□□ 0.72
DDB1-207ENST00000535967 PTPRKQ15262 1439 aa19.57■□□□□ 0.72
DDB1-207ENST00000535967 ZNF335Q9H4Z2 1342 aaPredicted RBP19.56■□□□□ 0.72
DDB1-207ENST00000535967 ZNF644Q9H582 1327 aaPredicted RBP19.56■□□□□ 0.72
DDB1-207ENST00000535967 RNF39Q9H2S5 420 aa19.55■□□□□ 0.72
DDB1-207ENST00000535967 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
DDB1-207ENST00000535967 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
DDB1-207ENST00000535967 GGT6Q6P531 493 aa19.53■□□□□ 0.72
DDB1-207ENST00000535967 SHANK2Q9UPX8 1470 aa19.53■□□□□ 0.72
DDB1-207ENST00000535967 SOCS7O14512 581 aa19.52■□□□□ 0.72
DDB1-207ENST00000535967 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
DDB1-207ENST00000535967 RTEL1-TNFRSF6BF6WH68 1400 aa19.52■□□□□ 0.71
DDB1-207ENST00000535967 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
DDB1-207ENST00000535967 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
DDB1-207ENST00000535967 DAPK1P53355 1430 aa19.48■□□□□ 0.71
DDB1-207ENST00000535967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.47■□□□□ 0.71
DDB1-207ENST00000535967 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
DDB1-207ENST00000535967 RRBP1Q9P2E9 1410 aaKnown RBP19.47■□□□□ 0.71
DDB1-207ENST00000535967 PKD2Q13563 968 aa19.45■□□□□ 0.7
DDB1-207ENST00000535967 ABCC5O15440 1437 aa19.45■□□□□ 0.7
DDB1-207ENST00000535967 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
DDB1-207ENST00000535967 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
DDB1-207ENST00000535967 EIF2AK4Q9P2K8 1649 aaKnown RBP19.42■□□□□ 0.7
DDB1-207ENST00000535967 MYCNP04198 464 aaPredicted RBP19.42■□□□□ 0.7
DDB1-207ENST00000535967 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
DDB1-207ENST00000535967 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
DDB1-207ENST00000535967 NEURL4Q96JN8 1562 aa19.41■□□□□ 0.7
DDB1-207ENST00000535967 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
DDB1-207ENST00000535967 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
DDB1-207ENST00000535967 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
DDB1-207ENST00000535967 ADGRL2O95490 1459 aa19.4■□□□□ 0.7
DDB1-207ENST00000535967 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.69
DDB1-207ENST00000535967 DUOX2Q9NRD8 1548 aa19.37■□□□□ 0.69
DDB1-207ENST00000535967 TNRQ92752 1358 aa19.36■□□□□ 0.69
DDB1-207ENST00000535967 KIF3BO15066 747 aa19.36■□□□□ 0.69
DDB1-207ENST00000535967 KDM5DQ9BY66 1539 aa19.36■□□□□ 0.69
DDB1-207ENST00000535967 PZPP20742 1482 aa19.36■□□□□ 0.69
DDB1-207ENST00000535967 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
DDB1-207ENST00000535967 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
DDB1-207ENST00000535967 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
DDB1-207ENST00000535967 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
DDB1-207ENST00000535967 ERBINQ96RT1 1412 aa19.31■□□□□ 0.68
DDB1-207ENST00000535967 KIF15Q9NS87 1388 aa19.31■□□□□ 0.68
DDB1-207ENST00000535967 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
DDB1-207ENST00000535967 DEPDC5O75140 1603 aa19.3■□□□□ 0.68
DDB1-207ENST00000535967 ROCK1Q13464 1354 aa19.3■□□□□ 0.68
DDB1-207ENST00000535967 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
DDB1-207ENST00000535967 HSPA1LP34931 641 aa19.29■□□□□ 0.68
DDB1-207ENST00000535967 WASHC2CQ9Y4E1 1318 aa19.29■□□□□ 0.68
DDB1-207ENST00000535967 CPS1P31327 1500 aa19.29■□□□□ 0.68
DDB1-207ENST00000535967 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
DDB1-207ENST00000535967 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
DDB1-207ENST00000535967 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.67
DDB1-207ENST00000535967 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.67
DDB1-207ENST00000535967 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
DDB1-207ENST00000535967 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
DDB1-207ENST00000535967 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
DDB1-207ENST00000535967 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
DDB1-207ENST00000535967 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
DDB1-207ENST00000535967 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
DDB1-207ENST00000535967 ANKLE2Q86XL3 938 aa19.24■□□□□ 0.67
DDB1-207ENST00000535967 MED14O60244 1454 aa19.23■□□□□ 0.67
DDB1-207ENST00000535967 ABCC3O15438 1527 aa19.23■□□□□ 0.67
DDB1-207ENST00000535967 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
DDB1-207ENST00000535967 IQGAP1P46940 1657 aa19.23■□□□□ 0.67
DDB1-207ENST00000535967 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
DDB1-207ENST00000535967 CEP152O94986 1710 aa19.22■□□□□ 0.67
DDB1-207ENST00000535967 UNC13BO14795 1591 aa19.22■□□□□ 0.67
DDB1-207ENST00000535967 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
DDB1-207ENST00000535967 RRP7BPQ9NSQ0 103 aa19.21■□□□□ 0.67
DDB1-207ENST00000535967 TOM1O60784 492 aa19.2■□□□□ 0.66
DDB1-207ENST00000535967 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
DDB1-207ENST00000535967 ITGAEP38570 1179 aa19.18■□□□□ 0.66
DDB1-207ENST00000535967 ERVK-7P63135 1459 aa19.18■□□□□ 0.66
DDB1-207ENST00000535967 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
DDB1-207ENST00000535967 UBR1Q8IWV7 1749 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms