RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
LRP6-202ENST00000535731 TNRQ92752 1358 aa31.66■■■□□ 2.66
LRP6-202ENST00000535731 RTEL1-TNFRSF6BF6WH68 1400 aa31.66■■■□□ 2.66
LRP6-202ENST00000535731 SHANK2Q9UPX8 1470 aa31.65■■■□□ 2.66
LRP6-202ENST00000535731 MBD5Q9P267 1494 aa31.63■■■□□ 2.65
LRP6-202ENST00000535731 MED1Q15648 1581 aaPredicted RBP31.63■■■□□ 2.65
LRP6-202ENST00000535731 KIF3BO15066 747 aa31.62■■■□□ 2.65
LRP6-202ENST00000535731 THEMISQ8N1K5 641 aaPredicted RBP31.62■■■□□ 2.65
LRP6-202ENST00000535731 WASHC2CQ9Y4E1 1318 aa31.57■■■□□ 2.64
LRP6-202ENST00000535731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.56■■■□□ 2.64
LRP6-202ENST00000535731 NEURL4Q96JN8 1562 aa31.56■■■□□ 2.64
LRP6-202ENST00000535731 PZPP20742 1482 aa31.55■■■□□ 2.64
LRP6-202ENST00000535731 PHF23Q9BUL5 403 aaPredicted RBP31.55■■■□□ 2.64
LRP6-202ENST00000535731 MIA2Q96PC5 1412 aa31.53■■■□□ 2.64
LRP6-202ENST00000535731 POLR1AO95602 1720 aaPredicted RBP31.52■■■□□ 2.64
LRP6-202ENST00000535731 RSPH4AQ5TD94 716 aa31.52■■■□□ 2.64
LRP6-202ENST00000535731 FAM135AQ9P2D6 1515 aa31.49■■■□□ 2.63
LRP6-202ENST00000535731 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
LRP6-202ENST00000535731 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
LRP6-202ENST00000535731 NPHP4O75161 1426 aaPredicted RBP31.49■■■□□ 2.63
LRP6-202ENST00000535731 MED14O60244 1454 aa31.48■■■□□ 2.63
LRP6-202ENST00000535731 VWDEQ8N2E2 1590 aa31.47■■■□□ 2.63
LRP6-202ENST00000535731 NLRP1Q9C000 1473 aa31.47■■■□□ 2.63
LRP6-202ENST00000535731 CEP162Q5TB80 1403 aa31.45■■■□□ 2.63
LRP6-202ENST00000535731 UGGT1Q9NYU2 1555 aa31.44■■■□□ 2.62
LRP6-202ENST00000535731 CCDC141Q6ZP82 1450 aa31.42■■■□□ 2.62
LRP6-202ENST00000535731 EHBP1L1Q8N3D4 1523 aa31.41■■■□□ 2.62
LRP6-202ENST00000535731 DEPDC5O75140 1603 aa31.4■■■□□ 2.62
LRP6-202ENST00000535731 ALKQ9UM73 1620 aa31.4■■■□□ 2.62
LRP6-202ENST00000535731 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
LRP6-202ENST00000535731 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
LRP6-202ENST00000535731 SENP3Q9H4L4 574 aaPredicted RBP31.34■■■□□ 2.61
LRP6-202ENST00000535731 LRRC7Q96NW7 1537 aa31.34■■■□□ 2.61
LRP6-202ENST00000535731 CAMSAP2Q08AD1 1489 aa31.31■■■□□ 2.6
LRP6-202ENST00000535731 IQGAP1P46940 1657 aa31.29■■■□□ 2.6
LRP6-202ENST00000535731 NCOA2Q15596 1464 aa31.27■■■□□ 2.6
LRP6-202ENST00000535731 STRCP1A6NGW2 1772 aa31.22■■■□□ 2.59
LRP6-202ENST00000535731 RGS17Q9UGC6 210 aaPredicted RBP31.22■■■□□ 2.59
LRP6-202ENST00000535731 ARHGEF5Q12774 1597 aa31.21■■■□□ 2.59
LRP6-202ENST00000535731 RNF17Q9BXT8 1623 aaKnown RBP31.2■■■□□ 2.58
LRP6-202ENST00000535731 ABCC3O15438 1527 aa31.19■■■□□ 2.58
LRP6-202ENST00000535731 SYNMO15061 1565 aa31.19■■■□□ 2.58
LRP6-202ENST00000535731 ERVK-7P63135 1459 aa31.19■■■□□ 2.58
LRP6-202ENST00000535731 TXNDC2Q86VQ3 553 aa31.17■■■□□ 2.58
LRP6-202ENST00000535731 LTKP29376 864 aa31.16■■■□□ 2.58
LRP6-202ENST00000535731 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.57
LRP6-202ENST00000535731 ZC3H13Q5T200 1668 aaKnown RBP31.12■■■□□ 2.57
LRP6-202ENST00000535731 EID1Q9Y6B2 187 aa31.11■■■□□ 2.57
LRP6-202ENST00000535731 ARHGAP23Q9P227 1491 aa31.08■■■□□ 2.57
LRP6-202ENST00000535731 FAM135BQ49AJ0 1406 aa31.07■■■□□ 2.57
LRP6-202ENST00000535731 MAST1Q9Y2H9 1570 aa31.06■■■□□ 2.56
LRP6-202ENST00000535731 UBR1Q8IWV7 1749 aa31.06■■■□□ 2.56
LRP6-202ENST00000535731 SLIT1O75093 1534 aa31.05■■■□□ 2.56
LRP6-202ENST00000535731 EIF2AK4Q9P2K8 1649 aaKnown RBP31.05■■■□□ 2.56
LRP6-202ENST00000535731 POTEAQ6S8J7 498 aa31.01■■■□□ 2.55
LRP6-202ENST00000535731 MROH1Q8NDA8 1641 aa31.01■■■□□ 2.55
LRP6-202ENST00000535731 ARHGAP31Q2M1Z3 1444 aa31■■■□□ 2.55
LRP6-202ENST00000535731 CFAP65Q6ZU64 1925 aaKnown RBP31■■■□□ 2.55
LRP6-202ENST00000535731 STAG3Q9UJ98 1225 aa30.97■■■□□ 2.55
LRP6-202ENST00000535731 TMEM2Q9UHN6 1383 aa30.96■■■□□ 2.55
LRP6-202ENST00000535731 KCNA6P17658 529 aa30.96■■■□□ 2.55
LRP6-202ENST00000535731 DUOX2Q9NRD8 1548 aa30.96■■■□□ 2.55
LRP6-202ENST00000535731 LRRC9Q6ZRR7 1453 aa30.95■■■□□ 2.55
LRP6-202ENST00000535731 TMEM94Q12767 1356 aa30.95■■■□□ 2.55
LRP6-202ENST00000535731 CEP152O94986 1710 aa30.95■■■□□ 2.54
LRP6-202ENST00000535731 XIRP1Q702N8 1843 aaKnown RBP30.94■■■□□ 2.54
LRP6-202ENST00000535731 PROSER2Q86WR7 435 aaPredicted RBP30.93■■■□□ 2.54
LRP6-202ENST00000535731 MYOM3Q5VTT5 1437 aa30.92■■■□□ 2.54
LRP6-202ENST00000535731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.9■■■□□ 2.541e-6■■□□□ 11.8
LRP6-202ENST00000535731 RRP7BPQ9NSQ0 103 aa30.88■■■□□ 2.53
LRP6-202ENST00000535731 IDI1Q13907 227 aa30.87■■■□□ 2.53
LRP6-202ENST00000535731 KANK4Q5T7N3 995 aaPredicted RBP30.87■■■□□ 2.53
LRP6-202ENST00000535731 KIF15Q9NS87 1388 aa30.87■■■□□ 2.53
LRP6-202ENST00000535731 SLC26A8Q96RN1 970 aa30.86■■■□□ 2.53
LRP6-202ENST00000535731 PRDM15P57071 1507 aaPredicted RBP30.84■■■□□ 2.53
LRP6-202ENST00000535731 ERBINQ96RT1 1412 aa30.84■■■□□ 2.53
LRP6-202ENST00000535731 RBM33Q96EV2 1170 aaKnown RBP30.84■■■□□ 2.53
LRP6-202ENST00000535731 KANK1Q14678 1352 aa30.83■■■□□ 2.53
LRP6-202ENST00000535731 PIK3C2BO00750 1634 aa30.83■■■□□ 2.53
LRP6-202ENST00000535731 VPS8Q8N3P4 1428 aa30.81■■■□□ 2.52
LRP6-202ENST00000535731 EFCAB6Q5THR3 1501 aa30.79■■■□□ 2.52
LRP6-202ENST00000535731 ROBO1Q9Y6N7 1651 aa30.79■■■□□ 2.52
LRP6-202ENST00000535731 SLAIN2Q9P270 581 aa30.79■■■□□ 2.52
LRP6-202ENST00000535731 TET3O43151 1660 aa30.78■■■□□ 2.52
LRP6-202ENST00000535731 MAP3K1Q13233 1512 aa30.78■■■□□ 2.52
LRP6-202ENST00000535731 ABCC5O15440 1437 aa30.77■■■□□ 2.52
LRP6-202ENST00000535731 MSH6P52701 1360 aa30.76■■■□□ 2.51
LRP6-202ENST00000535731 BCANQ96GW7 911 aa30.75■■■□□ 2.51
LRP6-202ENST00000535731 KDM5AP29375 1690 aaKnown RBP30.74■■■□□ 2.51
LRP6-202ENST00000535731 JCADQ9P266 1359 aa30.73■■■□□ 2.51
LRP6-202ENST00000535731 NKTRP30414 1462 aaKnown RBP30.72■■■□□ 2.51
LRP6-202ENST00000535731 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
LRP6-202ENST00000535731 LMTK2Q8IWU2 1503 aa30.7■■■□□ 2.51
LRP6-202ENST00000535731 NOS1P29475 1434 aa30.67■■■□□ 2.5
LRP6-202ENST00000535731 NWD1Q149M9 1564 aa30.65■■■□□ 2.5
LRP6-202ENST00000535731 DAPK1P53355 1430 aa30.64■■■□□ 2.5
LRP6-202ENST00000535731 HDGFP51858 240 aaKnown RBP30.64■■■□□ 2.5
LRP6-202ENST00000535731 ANKRD30AQ9BXX3 1397 aa30.64■■■□□ 2.5
LRP6-202ENST00000535731 CHIC2Q9UKJ5 165 aa30.63■■■□□ 2.49
LRP6-202ENST00000535731 PHLPP1O60346 1717 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms