RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
CLSTN3-205ENST00000535452 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
CLSTN3-205ENST00000535452 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
CLSTN3-205ENST00000535452 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
CLSTN3-205ENST00000535452 TNRQ92752 1358 aa20.67■□□□□ 0.9
CLSTN3-205ENST00000535452 MYOM3Q5VTT5 1437 aa20.66■□□□□ 0.9
CLSTN3-205ENST00000535452 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
CLSTN3-205ENST00000535452 A2ML1A8K2U0 1454 aa20.65■□□□□ 0.9
CLSTN3-205ENST00000535452 IQSEC2Q5JU85 1478 aa20.63■□□□□ 0.89
CLSTN3-205ENST00000535452 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
CLSTN3-205ENST00000535452 PZPP20742 1482 aa20.62■□□□□ 0.89
CLSTN3-205ENST00000535452 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
CLSTN3-205ENST00000535452 ANKLE2Q86XL3 938 aa20.61■□□□□ 0.89
CLSTN3-205ENST00000535452 FBXO31Q5XUX0 539 aaPredicted RBP20.59■□□□□ 0.89
CLSTN3-205ENST00000535452 NLRP1Q9C000 1473 aa20.58■□□□□ 0.89
CLSTN3-205ENST00000535452 MAST1Q9Y2H9 1570 aa20.58■□□□□ 0.88
CLSTN3-205ENST00000535452 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
CLSTN3-205ENST00000535452 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
CLSTN3-205ENST00000535452 UBAP1LF5GYI3 381 aa20.56■□□□□ 0.88
CLSTN3-205ENST00000535452 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
CLSTN3-205ENST00000535452 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
CLSTN3-205ENST00000535452 KANK1Q14678 1352 aa20.55■□□□□ 0.88
CLSTN3-205ENST00000535452 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
CLSTN3-205ENST00000535452 DUOX2Q9NRD8 1548 aa20.54■□□□□ 0.88
CLSTN3-205ENST00000535452 LTBP4Q8N2S1 1624 aa20.54■□□□□ 0.88
CLSTN3-205ENST00000535452 UGGT1Q9NYU2 1555 aa20.53■□□□□ 0.88
CLSTN3-205ENST00000535452 KIF15Q9NS87 1388 aa20.52■□□□□ 0.88
CLSTN3-205ENST00000535452 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
CLSTN3-205ENST00000535452 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
CLSTN3-205ENST00000535452 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
CLSTN3-205ENST00000535452 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
CLSTN3-205ENST00000535452 RNF17Q9BXT8 1623 aaKnown RBP20.5■□□□□ 0.87
CLSTN3-205ENST00000535452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.872e-7■■■■□ 20.6
CLSTN3-205ENST00000535452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLSTN3-205ENST00000535452 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
CLSTN3-205ENST00000535452 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
CLSTN3-205ENST00000535452 ERBINQ96RT1 1412 aa20.49■□□□□ 0.87
CLSTN3-205ENST00000535452 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
CLSTN3-205ENST00000535452 ABCC3O15438 1527 aa20.48■□□□□ 0.87
CLSTN3-205ENST00000535452 POLR1AO95602 1720 aaPredicted RBP20.48■□□□□ 0.87
CLSTN3-205ENST00000535452 TOM1O60784 492 aa20.48■□□□□ 0.87
CLSTN3-205ENST00000535452 CPS1P31327 1500 aa20.46■□□□□ 0.87
CLSTN3-205ENST00000535452 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
CLSTN3-205ENST00000535452 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
CLSTN3-205ENST00000535452 EID1Q9Y6B2 187 aa20.45■□□□□ 0.86
CLSTN3-205ENST00000535452 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
CLSTN3-205ENST00000535452 DAPK1P53355 1430 aa20.44■□□□□ 0.86
CLSTN3-205ENST00000535452 ABCC5O15440 1437 aa20.44■□□□□ 0.86
CLSTN3-205ENST00000535452 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
CLSTN3-205ENST00000535452 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
CLSTN3-205ENST00000535452 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
CLSTN3-205ENST00000535452 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
CLSTN3-205ENST00000535452 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
CLSTN3-205ENST00000535452 CEP152O94986 1710 aa20.38■□□□□ 0.85
CLSTN3-205ENST00000535452 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
CLSTN3-205ENST00000535452 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
CLSTN3-205ENST00000535452 MED14O60244 1454 aa20.37■□□□□ 0.85
CLSTN3-205ENST00000535452 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
CLSTN3-205ENST00000535452 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
CLSTN3-205ENST00000535452 NEURL4Q96JN8 1562 aa20.36■□□□□ 0.85
CLSTN3-205ENST00000535452 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
CLSTN3-205ENST00000535452 SCAF11Q99590 1463 aaKnown RBP20.33■□□□□ 0.85
CLSTN3-205ENST00000535452 MROH1Q8NDA8 1641 aa20.33■□□□□ 0.84
CLSTN3-205ENST00000535452 BCANQ96GW7 911 aa20.32■□□□□ 0.84
CLSTN3-205ENST00000535452 CFAP65Q6ZU64 1925 aaKnown RBP20.3■□□□□ 0.84
CLSTN3-205ENST00000535452 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
CLSTN3-205ENST00000535452 SLC52A1Q9NWF4 448 aa20.28■□□□□ 0.84
CLSTN3-205ENST00000535452 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
CLSTN3-205ENST00000535452 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.84
CLSTN3-205ENST00000535452 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
CLSTN3-205ENST00000535452 ADGRL2O95490 1459 aa20.25■□□□□ 0.83
CLSTN3-205ENST00000535452 LMTK2Q8IWU2 1503 aa20.25■□□□□ 0.83
CLSTN3-205ENST00000535452 SYNMO15061 1565 aa20.25■□□□□ 0.83
CLSTN3-205ENST00000535452 TMEM2Q9UHN6 1383 aa20.24■□□□□ 0.83
CLSTN3-205ENST00000535452 SLIT1O75093 1534 aa20.24■□□□□ 0.83
CLSTN3-205ENST00000535452 EFCAB6Q5THR3 1501 aa20.24■□□□□ 0.83
CLSTN3-205ENST00000535452 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
CLSTN3-205ENST00000535452 HSPA1LP34931 641 aa20.23■□□□□ 0.83
CLSTN3-205ENST00000535452 IDI1Q13907 227 aa20.22■□□□□ 0.83
CLSTN3-205ENST00000535452 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
CLSTN3-205ENST00000535452 PIK3C2BO00750 1634 aa20.21■□□□□ 0.83
CLSTN3-205ENST00000535452 SOCS7O14512 581 aa20.21■□□□□ 0.83
CLSTN3-205ENST00000535452 LTKP29376 864 aa20.21■□□□□ 0.83
CLSTN3-205ENST00000535452 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
CLSTN3-205ENST00000535452 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
CLSTN3-205ENST00000535452 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
CLSTN3-205ENST00000535452 ITGAEP38570 1179 aa20.19■□□□□ 0.82
CLSTN3-205ENST00000535452 LRRC7Q96NW7 1537 aa20.18■□□□□ 0.82
CLSTN3-205ENST00000535452 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
CLSTN3-205ENST00000535452 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
CLSTN3-205ENST00000535452 ILDR2Q71H61 639 aa20.17■□□□□ 0.82
CLSTN3-205ENST00000535452 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLSTN3-205ENST00000535452 ADGRB3O60242 1522 aa20.15■□□□□ 0.82
CLSTN3-205ENST00000535452 NOS1P29475 1434 aa20.14■□□□□ 0.81
CLSTN3-205ENST00000535452 ROCK1Q13464 1354 aa20.14■□□□□ 0.81
CLSTN3-205ENST00000535452 KCNA6P17658 529 aa20.13■□□□□ 0.81
CLSTN3-205ENST00000535452 PROSER2Q86WR7 435 aaPredicted RBP20.13■□□□□ 0.81
CLSTN3-205ENST00000535452 SLC26A8Q96RN1 970 aa20.13■□□□□ 0.81
CLSTN3-205ENST00000535452 TET3O43151 1660 aa20.11■□□□□ 0.81
CLSTN3-205ENST00000535452 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms