RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 ITGAEP38570 1179 aa31.21■■■□□ 2.59
CHFR-209ENST00000535181 GGT6Q6P531 493 aa31.19■■■□□ 2.58
CHFR-209ENST00000535181 ANKRD50Q9ULJ7 1429 aa31.18■■■□□ 2.58
CHFR-209ENST00000535181 MROH2AA6NES4 1674 aa31.18■■■□□ 2.58
CHFR-209ENST00000535181 DEPDC5O75140 1603 aa31.17■■■□□ 2.58
CHFR-209ENST00000535181 MROH1Q8NDA8 1641 aa31.17■■■□□ 2.58
CHFR-209ENST00000535181 PRDM15P57071 1507 aaPredicted RBP31.15■■■□□ 2.58
CHFR-209ENST00000535181 KDM5DQ9BY66 1539 aa31.14■■■□□ 2.58
CHFR-209ENST00000535181 ESF1Q9H501 851 aaKnown RBP31.14■■■□□ 2.58
CHFR-209ENST00000535181 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
CHFR-209ENST00000535181 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
CHFR-209ENST00000535181 ZC3H13Q5T200 1668 aaKnown RBP31.12■■■□□ 2.57
CHFR-209ENST00000535181 GCC2Q8IWJ2 1684 aa31.09■■■□□ 2.57
CHFR-209ENST00000535181 C3P01024 1663 aa31.08■■■□□ 2.57
CHFR-209ENST00000535181 HFM1A2PYH4 1435 aa31.07■■■□□ 2.57
CHFR-209ENST00000535181 ABCC3O15438 1527 aa31.06■■■□□ 2.56
CHFR-209ENST00000535181 NAIPQ13075 1403 aa31.06■■■□□ 2.56
CHFR-209ENST00000535181 VWDEQ8N2E2 1590 aa31.05■■■□□ 2.56
CHFR-209ENST00000535181 ZMYM3Q14202 1370 aa31.05■■■□□ 2.56
CHFR-209ENST00000535181 WASHC2CQ9Y4E1 1318 aa31.04■■■□□ 2.56
CHFR-209ENST00000535181 UNC13BO14795 1591 aa31.04■■■□□ 2.56
CHFR-209ENST00000535181 KANK1Q14678 1352 aa31■■■□□ 2.55
CHFR-209ENST00000535181 LMTK2Q8IWU2 1503 aa30.99■■■□□ 2.55
CHFR-209ENST00000535181 CEP152O94986 1710 aa30.98■■■□□ 2.55
CHFR-209ENST00000535181 NPATQ14207 1427 aa30.97■■■□□ 2.55
CHFR-209ENST00000535181 PZPP20742 1482 aa30.96■■■□□ 2.55
CHFR-209ENST00000535181 CAMSAP1Q5T5Y3 1602 aa30.96■■■□□ 2.55
CHFR-209ENST00000535181 CEBPAP49715 358 aaPredicted RBP30.96■■■□□ 2.55
CHFR-209ENST00000535181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.93■■■□□ 2.54
CHFR-209ENST00000535181 ARHGAP31Q2M1Z3 1444 aa30.92■■■□□ 2.54
CHFR-209ENST00000535181 SETD1BQ9UPS6 1966 aaKnown RBP30.92■■■□□ 2.54
CHFR-209ENST00000535181 IQGAP3Q86VI3 1631 aa30.9■■■□□ 2.54
CHFR-209ENST00000535181 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
CHFR-209ENST00000535181 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
CHFR-209ENST00000535181 EFCAB6Q5THR3 1501 aa30.87■■■□□ 2.53
CHFR-209ENST00000535181 TET3O43151 1660 aa30.86■■■□□ 2.53
CHFR-209ENST00000535181 NUP155O75694 1391 aa30.83■■■□□ 2.53
CHFR-209ENST00000535181 SPATA31D1Q6ZQQ2 1576 aa30.83■■■□□ 2.53
CHFR-209ENST00000535181 RPRD2Q5VT52 1461 aaKnown RBP30.81■■■□□ 2.52
CHFR-209ENST00000535181 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
CHFR-209ENST00000535181 SETD5Q9C0A6 1442 aa30.81■■■□□ 2.52
CHFR-209ENST00000535181 ERVK-7P63135 1459 aa30.8■■■□□ 2.52
CHFR-209ENST00000535181 UHRF1BP1Q6BDS2 1440 aa30.8■■■□□ 2.52
CHFR-209ENST00000535181 ACIN1Q9UKV3 1341 aaKnown RBP30.78■■■□□ 2.52
CHFR-209ENST00000535181 MYO3AQ8NEV4 1616 aa30.78■■■□□ 2.52
CHFR-209ENST00000535181 FBXO31Q5XUX0 539 aaPredicted RBP30.77■■■□□ 2.52
CHFR-209ENST00000535181 TNRQ92752 1358 aa30.77■■■□□ 2.52
CHFR-209ENST00000535181 ZNF142P52746 1687 aaPredicted RBP30.74■■■□□ 2.51
CHFR-209ENST00000535181 E9PCH4 1651 aa30.72■■■□□ 2.51
CHFR-209ENST00000535181 NLRP1Q9C000 1473 aa30.71■■■□□ 2.51
CHFR-209ENST00000535181 NOS1P29475 1434 aa30.7■■■□□ 2.5
CHFR-209ENST00000535181 RAB3GAP2Q9H2M9 1393 aa30.69■■■□□ 2.5
CHFR-209ENST00000535181 CEP170BQ9Y4F5 1589 aaPredicted RBP30.69■■■□□ 2.5
CHFR-209ENST00000535181 CFAP65Q6ZU64 1925 aaKnown RBP30.69■■■□□ 2.5
CHFR-209ENST00000535181 A2ML1A8K2U0 1454 aa30.67■■■□□ 2.5
CHFR-209ENST00000535181 HRCP23327 699 aa30.66■■■□□ 2.5
CHFR-209ENST00000535181 TRIM52Q96A61 297 aa30.66■■■□□ 2.5
CHFR-209ENST00000535181 TRIM26Q12899 539 aaPredicted RBP30.65■■■□□ 2.5
CHFR-209ENST00000535181 SYNMO15061 1565 aa30.64■■■□□ 2.5
CHFR-209ENST00000535181 SLC4A1APQ9BWU0 796 aaKnown RBP30.57■■■□□ 2.48
CHFR-209ENST00000535181 PTPRTO14522 1441 aa30.56■■■□□ 2.48
CHFR-209ENST00000535181 SPHKAPQ2M3C7 1700 aa30.56■■■□□ 2.48
CHFR-209ENST00000535181 KDM5AP29375 1690 aaKnown RBP30.55■■■□□ 2.48
CHFR-209ENST00000535181 PIK3C2BO00750 1634 aa30.55■■■□□ 2.48
CHFR-209ENST00000535181 UGGT1Q9NYU2 1555 aa30.55■■■□□ 2.48
CHFR-209ENST00000535181 SLC52A1Q9NWF4 448 aa30.55■■■□□ 2.48
CHFR-209ENST00000535181 HSPA2P54652 639 aa30.54■■■□□ 2.48
CHFR-209ENST00000535181 PLA2R1Q13018 1463 aa30.53■■■□□ 2.48
CHFR-209ENST00000535181 PKD2Q13563 968 aa30.52■■■□□ 2.48
CHFR-209ENST00000535181 UBR1Q8IWV7 1749 aa30.52■■■□□ 2.48
CHFR-209ENST00000535181 MPHOSPH9Q99550 1183 aa30.51■■■□□ 2.47
CHFR-209ENST00000535181 TRPM2O94759 1503 aa30.5■■■□□ 2.47
CHFR-209ENST00000535181 IDI1Q13907 227 aa30.49■■■□□ 2.47
CHFR-209ENST00000535181 THEMISQ8N1K5 641 aaPredicted RBP30.47■■■□□ 2.47
CHFR-209ENST00000535181 ADGRB3O60242 1522 aa30.47■■■□□ 2.47
CHFR-209ENST00000535181 STRCQ7RTU9 1775 aa30.45■■■□□ 2.46
CHFR-209ENST00000535181 SLIT1O75093 1534 aa30.41■■■□□ 2.46
CHFR-209ENST00000535181 TMEM131LA2VDJ0 1609 aa30.4■■■□□ 2.46
CHFR-209ENST00000535181 ARHGAP23Q9P227 1491 aa30.39■■■□□ 2.46
CHFR-209ENST00000535181 CLTCL1P53675 1640 aa30.38■■■□□ 2.45
CHFR-209ENST00000535181 POLR1AO95602 1720 aaPredicted RBP30.37■■■□□ 2.45
CHFR-209ENST00000535181 STAG3Q9UJ98 1225 aa30.36■■■□□ 2.45
CHFR-209ENST00000535181 TMEM2Q9UHN6 1383 aa30.34■■■□□ 2.45
CHFR-209ENST00000535181 FOXD1Q16676 465 aa30.34■■■□□ 2.45
CHFR-209ENST00000535181 MYO5BQ9ULV0 1848 aa30.33■■■□□ 2.45
CHFR-209ENST00000535181 DMRT2Q9Y5R5 561 aa30.32■■■□□ 2.44
CHFR-209ENST00000535181 ANKLE2Q86XL3 938 aa30.31■■■□□ 2.44
CHFR-209ENST00000535181 NEURL4Q96JN8 1562 aa30.31■■■□□ 2.44
CHFR-209ENST00000535181 MED14O60244 1454 aa30.3■■■□□ 2.44
CHFR-209ENST00000535181 KIF1BO60333 1816 aa30.29■■■□□ 2.44
CHFR-209ENST00000535181 CCDC144AA2RUR9 1427 aa30.29■■■□□ 2.44
CHFR-209ENST00000535181 NCKAP5LQ9HCH0 1330 aa30.28■■■□□ 2.44
CHFR-209ENST00000535181 SCAF11Q99590 1463 aaKnown RBP30.28■■■□□ 2.44
CHFR-209ENST00000535181 ZFYVE9O95405 1425 aa30.26■■■□□ 2.43
CHFR-209ENST00000535181 ANKRD30BQ9BXX2 1392 aa30.25■■■□□ 2.43
CHFR-209ENST00000535181 CHGAP10645 457 aaKnown RBP30.23■■■□□ 2.43
CHFR-209ENST00000535181 EID1Q9Y6B2 187 aa30.23■■■□□ 2.43
CHFR-209ENST00000535181 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
CHFR-209ENST00000535181 LTKP29376 864 aa30.21■■■□□ 2.43
CHFR-209ENST00000535181 TXNDC2Q86VQ3 553 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms