RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-203ENST00000534830 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-203ENST00000534830 PLEKHH2Q8IVE3 1493 aa16.12■□□□□ 0.17
CLSTN3-203ENST00000534830 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
CLSTN3-203ENST00000534830 NEURL4Q96JN8 1562 aa16.1■□□□□ 0.17
CLSTN3-203ENST00000534830 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-203ENST00000534830 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
CLSTN3-203ENST00000534830 MBD5Q9P267 1494 aa16.09■□□□□ 0.17
CLSTN3-203ENST00000534830 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-203ENST00000534830 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-203ENST00000534830 TNRQ92752 1358 aa16.07■□□□□ 0.16
CLSTN3-203ENST00000534830 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
CLSTN3-203ENST00000534830 ALKQ9UM73 1620 aa16.07■□□□□ 0.16
CLSTN3-203ENST00000534830 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
CLSTN3-203ENST00000534830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■■■■□ 20.6
CLSTN3-203ENST00000534830 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
CLSTN3-203ENST00000534830 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
CLSTN3-203ENST00000534830 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
CLSTN3-203ENST00000534830 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
CLSTN3-203ENST00000534830 MAP3K1Q13233 1512 aa16.03■□□□□ 0.16
CLSTN3-203ENST00000534830 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.16
CLSTN3-203ENST00000534830 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
CLSTN3-203ENST00000534830 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.15
CLSTN3-203ENST00000534830 PZPP20742 1482 aa15.99■□□□□ 0.15
CLSTN3-203ENST00000534830 KIF3BO15066 747 aa15.99■□□□□ 0.15
CLSTN3-203ENST00000534830 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
CLSTN3-203ENST00000534830 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
CLSTN3-203ENST00000534830 MED14O60244 1454 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 CAMSAP2Q08AD1 1489 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 DEPDC5O75140 1603 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 RNF17Q9BXT8 1623 aaKnown RBP15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 UGGT1Q9NYU2 1555 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 IQGAP1P46940 1657 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
CLSTN3-203ENST00000534830 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
CLSTN3-203ENST00000534830 KANK4Q5T7N3 995 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-203ENST00000534830 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-203ENST00000534830 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
CLSTN3-203ENST00000534830 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
CLSTN3-203ENST00000534830 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
CLSTN3-203ENST00000534830 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
CLSTN3-203ENST00000534830 NLRP1Q9C000 1473 aa15.96■□□□□ 0.14
CLSTN3-203ENST00000534830 POTEAQ6S8J7 498 aa15.94■□□□□ 0.14
CLSTN3-203ENST00000534830 SYNMO15061 1565 aa15.94■□□□□ 0.14
CLSTN3-203ENST00000534830 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
CLSTN3-203ENST00000534830 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
CLSTN3-203ENST00000534830 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
CLSTN3-203ENST00000534830 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
CLSTN3-203ENST00000534830 ZC3H13Q5T200 1668 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-203ENST00000534830 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-203ENST00000534830 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-203ENST00000534830 FAM135BQ49AJ0 1406 aa15.83■□□□□ 0.12
CLSTN3-203ENST00000534830 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-203ENST00000534830 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
CLSTN3-203ENST00000534830 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
CLSTN3-203ENST00000534830 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
CLSTN3-203ENST00000534830 EIF2AK4Q9P2K8 1649 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-203ENST00000534830 LTKP29376 864 aa15.8■□□□□ 0.12
CLSTN3-203ENST00000534830 UBR1Q8IWV7 1749 aa15.8■□□□□ 0.12
CLSTN3-203ENST00000534830 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
CLSTN3-203ENST00000534830 APLP2Q06481 763 aa15.79■□□□□ 0.12
CLSTN3-203ENST00000534830 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
CLSTN3-203ENST00000534830 ABCC3O15438 1527 aa15.78■□□□□ 0.12
CLSTN3-203ENST00000534830 ABCC5O15440 1437 aa15.78■□□□□ 0.12
CLSTN3-203ENST00000534830 ROBO1Q9Y6N7 1651 aa15.77■□□□□ 0.12
CLSTN3-203ENST00000534830 MROH1Q8NDA8 1641 aa15.77■□□□□ 0.12
CLSTN3-203ENST00000534830 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
CLSTN3-203ENST00000534830 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
CLSTN3-203ENST00000534830 DUOX2Q9NRD8 1548 aa15.76■□□□□ 0.11
CLSTN3-203ENST00000534830 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
CLSTN3-203ENST00000534830 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
CLSTN3-203ENST00000534830 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-203ENST00000534830 DAPK1P53355 1430 aa15.74■□□□□ 0.11
CLSTN3-203ENST00000534830 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-203ENST00000534830 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLSTN3-203ENST00000534830 SLIT1O75093 1534 aa15.73■□□□□ 0.11
CLSTN3-203ENST00000534830 CEP152O94986 1710 aa15.72■□□□□ 0.11
CLSTN3-203ENST00000534830 TRIM52Q96A61 297 aa15.71■□□□□ 0.11
CLSTN3-203ENST00000534830 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
CLSTN3-203ENST00000534830 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
CLSTN3-203ENST00000534830 ERBINQ96RT1 1412 aa15.7■□□□□ 0.1
CLSTN3-203ENST00000534830 KCNA6P17658 529 aa15.7■□□□□ 0.1
CLSTN3-203ENST00000534830 PHLPP1O60346 1717 aa15.7■□□□□ 0.1
CLSTN3-203ENST00000534830 JCADQ9P266 1359 aa15.7■□□□□ 0.1
CLSTN3-203ENST00000534830 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-203ENST00000534830 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-203ENST00000534830 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
CLSTN3-203ENST00000534830 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
CLSTN3-203ENST00000534830 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
CLSTN3-203ENST00000534830 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
CLSTN3-203ENST00000534830 MSH6P52701 1360 aa15.66■□□□□ 0.1
CLSTN3-203ENST00000534830 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-203ENST00000534830 ARHGAP31Q2M1Z3 1444 aa15.66■□□□□ 0.1
CLSTN3-203ENST00000534830 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
CLSTN3-203ENST00000534830 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
CLSTN3-203ENST00000534830 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
CLSTN3-203ENST00000534830 BCANQ96GW7 911 aa15.63■□□□□ 0.09
CLSTN3-203ENST00000534830 CHIC2Q9UKJ5 165 aa15.63■□□□□ 0.09
CLSTN3-203ENST00000534830 LMTK2Q8IWU2 1503 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms