RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PPARGC1BQ86YN6 1023 aaKnown RBP32.93■■■□□ 2.86
PKP3-211ENST00000534401 KIF15Q9NS87 1388 aa32.93■■■□□ 2.86
PKP3-211ENST00000534401 NCOA1Q15788 1441 aa32.93■■■□□ 2.86
PKP3-211ENST00000534401 FAM50AQ14320 339 aaKnown RBP32.92■■■□□ 2.86
PKP3-211ENST00000534401 ANKRD30AQ9BXX3 1397 aa32.89■■■□□ 2.86
PKP3-211ENST00000534401 ERBINQ96RT1 1412 aa32.88■■■□□ 2.85
PKP3-211ENST00000534401 NPATQ14207 1427 aa32.87■■■□□ 2.85
PKP3-211ENST00000534401 PLPPR3Q6T4P5 718 aa32.87■■■□□ 2.85
PKP3-211ENST00000534401 PREX1Q8TCU6 1659 aa32.87■■■□□ 2.85
PKP3-211ENST00000534401 PTPRKQ15262 1439 aa32.86■■■□□ 2.85
PKP3-211ENST00000534401 RRP7BPQ9NSQ0 103 aa32.86■■■□□ 2.85
PKP3-211ENST00000534401 MROH1Q8NDA8 1641 aa32.86■■■□□ 2.85
PKP3-211ENST00000534401 KDM5DQ9BY66 1539 aa32.84■■■□□ 2.85
PKP3-211ENST00000534401 CHIC2Q9UKJ5 165 aa32.84■■■□□ 2.85
PKP3-211ENST00000534401 RRBP1Q9P2E9 1410 aaKnown RBP32.83■■■□□ 2.85
PKP3-211ENST00000534401 DEPDC5O75140 1603 aa32.77■■■□□ 2.84
PKP3-211ENST00000534401 ROCK1Q13464 1354 aa32.77■■■□□ 2.84
PKP3-211ENST00000534401 WASHC2CQ9Y4E1 1318 aa32.77■■■□□ 2.84
PKP3-211ENST00000534401 ZC3H13Q5T200 1668 aaKnown RBP32.76■■■□□ 2.84
PKP3-211ENST00000534401 ABCC3O15438 1527 aa32.76■■■□□ 2.83
PKP3-211ENST00000534401 PRDM15P57071 1507 aaPredicted RBP32.76■■■□□ 2.83
PKP3-211ENST00000534401 UHRF1BP1Q6BDS2 1440 aa32.76■■■□□ 2.83
PKP3-211ENST00000534401 PZPP20742 1482 aa32.74■■■□□ 2.83
PKP3-211ENST00000534401 HSPA2P54652 639 aa32.7■■■□□ 2.83
PKP3-211ENST00000534401 VWDEQ8N2E2 1590 aa32.68■■■□□ 2.82
PKP3-211ENST00000534401 ANKRD50Q9ULJ7 1429 aa32.68■■■□□ 2.82
PKP3-211ENST00000534401 CEP152O94986 1710 aa32.65■■■□□ 2.82
PKP3-211ENST00000534401 ARHGAP31Q2M1Z3 1444 aa32.63■■■□□ 2.81
PKP3-211ENST00000534401 FBXO31Q5XUX0 539 aaPredicted RBP32.63■■■□□ 2.81
PKP3-211ENST00000534401 ZNF142P52746 1687 aaPredicted RBP32.62■■■□□ 2.81
PKP3-211ENST00000534401 LMTK2Q8IWU2 1503 aa32.62■■■□□ 2.81
PKP3-211ENST00000534401 CAMSAP1Q5T5Y3 1602 aa32.62■■■□□ 2.81
PKP3-211ENST00000534401 MYO3AQ8NEV4 1616 aa32.62■■■□□ 2.81
PKP3-211ENST00000534401 SPATA31D1Q6ZQQ2 1576 aa32.58■■■□□ 2.81
PKP3-211ENST00000534401 TNRQ92752 1358 aa32.58■■■□□ 2.81
PKP3-211ENST00000534401 STRCQ7RTU9 1775 aa32.57■■■□□ 2.8
PKP3-211ENST00000534401 KANK1Q14678 1352 aa32.57■■■□□ 2.8
PKP3-211ENST00000534401 CEP170BQ9Y4F5 1589 aaPredicted RBP32.55■■■□□ 2.8
PKP3-211ENST00000534401 A2ML1A8K2U0 1454 aa32.54■■■□□ 2.8
PKP3-211ENST00000534401 ITGAEP38570 1179 aa32.54■■■□□ 2.8
PKP3-211ENST00000534401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.53■■■□□ 2.8
PKP3-211ENST00000534401 ERVK-7P63135 1459 aa32.53■■■□□ 2.8
PKP3-211ENST00000534401 UNC13BO14795 1591 aa32.53■■■□□ 2.8
PKP3-211ENST00000534401 CFAP65Q6ZU64 1925 aaKnown RBP32.49■■■□□ 2.79
PKP3-211ENST00000534401 NLRP1Q9C000 1473 aa32.49■■■□□ 2.79
PKP3-211ENST00000534401 PLA2R1Q13018 1463 aa32.46■■■□□ 2.79
PKP3-211ENST00000534401 EFCAB6Q5THR3 1501 aa32.45■■■□□ 2.78
PKP3-211ENST00000534401 NAIPQ13075 1403 aa32.43■■■□□ 2.78
PKP3-211ENST00000534401 TET3O43151 1660 aa32.41■■■□□ 2.78
PKP3-211ENST00000534401 DMRT2Q9Y5R5 561 aa32.4■■■□□ 2.78
PKP3-211ENST00000534401 PTPRTO14522 1441 aa32.4■■■□□ 2.78
PKP3-211ENST00000534401 RPRD2Q5VT52 1461 aaKnown RBP32.39■■■□□ 2.78
PKP3-211ENST00000534401 IQGAP3Q86VI3 1631 aa32.39■■■□□ 2.78
PKP3-211ENST00000534401 GCC2Q8IWJ2 1684 aa32.39■■■□□ 2.78
PKP3-211ENST00000534401 HFM1A2PYH4 1435 aa32.38■■■□□ 2.77
PKP3-211ENST00000534401 NOS1P29475 1434 aa32.38■■■□□ 2.77
PKP3-211ENST00000534401 UGGT1Q9NYU2 1555 aa32.34■■■□□ 2.77
PKP3-211ENST00000534401 PKD2Q13563 968 aa32.34■■■□□ 2.77
PKP3-211ENST00000534401 THEMISQ8N1K5 641 aaPredicted RBP32.32■■■□□ 2.76
PKP3-211ENST00000534401 SYNMO15061 1565 aa32.31■■■□□ 2.76
PKP3-211ENST00000534401 NUP155O75694 1391 aa32.31■■■□□ 2.76
PKP3-211ENST00000534401 UBR1Q8IWV7 1749 aa32.29■■■□□ 2.76
PKP3-211ENST00000534401 NCKAP5LQ9HCH0 1330 aa32.28■■■□□ 2.76
PKP3-211ENST00000534401 E9PCH4 1651 aa32.27■■■□□ 2.76
PKP3-211ENST00000534401 FBXO41Q8TF61 875 aa32.26■■■□□ 2.75
PKP3-211ENST00000534401 KDM5AP29375 1690 aaKnown RBP32.26■■■□□ 2.75
PKP3-211ENST00000534401 IDI1Q13907 227 aa32.23■■■□□ 2.75
PKP3-211ENST00000534401 POLR1AO95602 1720 aaPredicted RBP32.23■■■□□ 2.75
PKP3-211ENST00000534401 PIK3C2BO00750 1634 aa32.22■■■□□ 2.75
PKP3-211ENST00000534401 SLC52A1Q9NWF4 448 aa32.22■■■□□ 2.75
PKP3-211ENST00000534401 NEURL4Q96JN8 1562 aa32.22■■■□□ 2.75
PKP3-211ENST00000534401 ARHGAP23Q9P227 1491 aa32.21■■■□□ 2.75
PKP3-211ENST00000534401 MED14O60244 1454 aa32.2■■■□□ 2.75
PKP3-211ENST00000534401 ANKLE2Q86XL3 938 aa32.19■■■□□ 2.74
PKP3-211ENST00000534401 SLIT1O75093 1534 aa32.19■■■□□ 2.74
PKP3-211ENST00000534401 LTBP4Q8N2S1 1624 aa32.11■■■□□ 2.73
PKP3-211ENST00000534401 ADGRB3O60242 1522 aa32.1■■■□□ 2.73
PKP3-211ENST00000534401 TMEM2Q9UHN6 1383 aa32.09■■■□□ 2.73
PKP3-211ENST00000534401 NPHP4O75161 1426 aaPredicted RBP32.07■■■□□ 2.72
PKP3-211ENST00000534401 SCAF11Q99590 1463 aaKnown RBP32.06■■■□□ 2.72
PKP3-211ENST00000534401 LTKP29376 864 aa32.06■■■□□ 2.72
PKP3-211ENST00000534401 TMEM131LA2VDJ0 1609 aa32.06■■■□□ 2.72
PKP3-211ENST00000534401 SPHKAPQ2M3C7 1700 aa32.04■■■□□ 2.72
PKP3-211ENST00000534401 CERKQ8TCT0 537 aa32.04■■■□□ 2.72
PKP3-211ENST00000534401 SETD5Q9C0A6 1442 aa32.03■■■□□ 2.72
PKP3-211ENST00000534401 ACIN1Q9UKV3 1341 aaKnown RBP32.02■■■□□ 2.72
PKP3-211ENST00000534401 IQGAP1P46940 1657 aa32.02■■■□□ 2.72
PKP3-211ENST00000534401 STAG3Q9UJ98 1225 aa32.02■■■□□ 2.72
PKP3-211ENST00000534401 MYO5BQ9ULV0 1848 aa32.02■■■□□ 2.72
PKP3-211ENST00000534401 TXNDC2Q86VQ3 553 aa32.01■■■□□ 2.71
PKP3-211ENST00000534401 TRIM52Q96A61 297 aa32.01■■■□□ 2.71
PKP3-211ENST00000534401 ZFYVE9O95405 1425 aa31.98■■■□□ 2.71
PKP3-211ENST00000534401 ZNF335Q9H4Z2 1342 aaPredicted RBP31.98■■■□□ 2.71
PKP3-211ENST00000534401 EID1Q9Y6B2 187 aa31.97■■■□□ 2.71
PKP3-211ENST00000534401 TRPM2O94759 1503 aa31.95■■■□□ 2.71
PKP3-211ENST00000534401 SLC4A1APQ9BWU0 796 aaKnown RBP31.95■■■□□ 2.71
PKP3-211ENST00000534401 IQSEC2Q5JU85 1478 aa31.92■■■□□ 2.7
PKP3-211ENST00000534401 HRCP23327 699 aa31.89■■■□□ 2.7
PKP3-211ENST00000534401 RAB3GAP2Q9H2M9 1393 aa31.89■■■□□ 2.7
PKP3-211ENST00000534401 RIMS2Q9UQ26 1411 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms