RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
RPUSD4-209ENST00000534393 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
RPUSD4-209ENST00000534393 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
RPUSD4-209ENST00000534393 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
RPUSD4-209ENST00000534393 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-209ENST00000534393 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.29
RPUSD4-209ENST00000534393 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
RPUSD4-209ENST00000534393 PZPP20742 1482 aa13.26□□□□□ -0.29
RPUSD4-209ENST00000534393 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-209ENST00000534393 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
RPUSD4-209ENST00000534393 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
RPUSD4-209ENST00000534393 TNRQ92752 1358 aa13.24□□□□□ -0.29
RPUSD4-209ENST00000534393 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
RPUSD4-209ENST00000534393 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-209ENST00000534393 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-209ENST00000534393 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-209ENST00000534393 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-209ENST00000534393 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-209ENST00000534393 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
RPUSD4-209ENST00000534393 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
RPUSD4-209ENST00000534393 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-209ENST00000534393 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.3
RPUSD4-209ENST00000534393 APLP2Q06481 763 aa13.2□□□□□ -0.3
RPUSD4-209ENST00000534393 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
RPUSD4-209ENST00000534393 ANKLE2Q86XL3 938 aa13.19□□□□□ -0.3
RPUSD4-209ENST00000534393 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
RPUSD4-209ENST00000534393 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
RPUSD4-209ENST00000534393 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
RPUSD4-209ENST00000534393 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
RPUSD4-209ENST00000534393 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
RPUSD4-209ENST00000534393 ABCC3O15438 1527 aa13.17□□□□□ -0.3
RPUSD4-209ENST00000534393 CPS1P31327 1500 aa13.17□□□□□ -0.3
RPUSD4-209ENST00000534393 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
RPUSD4-209ENST00000534393 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 CEP152O94986 1710 aa13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 MED14O60244 1454 aa13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 SHANK2Q9UPX8 1470 aa13.15□□□□□ -0.3
RPUSD4-209ENST00000534393 MROH1Q8NDA8 1641 aa13.13□□□□□ -0.31
RPUSD4-209ENST00000534393 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
RPUSD4-209ENST00000534393 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
RPUSD4-209ENST00000534393 ERVK-7P63135 1459 aa13.12□□□□□ -0.31
RPUSD4-209ENST00000534393 TOM1O60784 492 aa13.12□□□□□ -0.31
RPUSD4-209ENST00000534393 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-209ENST00000534393 ERBINQ96RT1 1412 aa13.12□□□□□ -0.31
RPUSD4-209ENST00000534393 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
RPUSD4-209ENST00000534393 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
RPUSD4-209ENST00000534393 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
RPUSD4-209ENST00000534393 ABCC5O15440 1437 aa13.1□□□□□ -0.31
RPUSD4-209ENST00000534393 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
RPUSD4-209ENST00000534393 KANK1Q14678 1352 aa13.09□□□□□ -0.31
RPUSD4-209ENST00000534393 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
RPUSD4-209ENST00000534393 DAPK1P53355 1430 aa13.08□□□□□ -0.32
RPUSD4-209ENST00000534393 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
RPUSD4-209ENST00000534393 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.32
RPUSD4-209ENST00000534393 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
RPUSD4-209ENST00000534393 KDM5AP29375 1690 aaKnown RBP13.06□□□□□ -0.32
RPUSD4-209ENST00000534393 SOCS7O14512 581 aa13.06□□□□□ -0.32
RPUSD4-209ENST00000534393 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
RPUSD4-209ENST00000534393 SCAF11Q99590 1463 aaKnown RBP13.05□□□□□ -0.32
RPUSD4-209ENST00000534393 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
RPUSD4-209ENST00000534393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■□□□ 14.1
RPUSD4-209ENST00000534393 SYNMO15061 1565 aa13.05□□□□□ -0.32
RPUSD4-209ENST00000534393 SLIT1O75093 1534 aa13.04□□□□□ -0.32
RPUSD4-209ENST00000534393 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
RPUSD4-209ENST00000534393 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
RPUSD4-209ENST00000534393 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
RPUSD4-209ENST00000534393 TXNDC2Q86VQ3 553 aa13.03□□□□□ -0.32
RPUSD4-209ENST00000534393 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
RPUSD4-209ENST00000534393 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
RPUSD4-209ENST00000534393 PIK3C2BO00750 1634 aa13.02□□□□□ -0.32
RPUSD4-209ENST00000534393 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
RPUSD4-209ENST00000534393 HSPA1LP34931 641 aa13.01□□□□□ -0.33
RPUSD4-209ENST00000534393 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
RPUSD4-209ENST00000534393 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
RPUSD4-209ENST00000534393 ADGRL2O95490 1459 aa13□□□□□ -0.33
RPUSD4-209ENST00000534393 EFCAB6Q5THR3 1501 aa12.99□□□□□ -0.33
RPUSD4-209ENST00000534393 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
RPUSD4-209ENST00000534393 LTKP29376 864 aa12.99□□□□□ -0.33
RPUSD4-209ENST00000534393 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
RPUSD4-209ENST00000534393 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-209ENST00000534393 IDI1Q13907 227 aa12.97□□□□□ -0.33
RPUSD4-209ENST00000534393 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
RPUSD4-209ENST00000534393 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
RPUSD4-209ENST00000534393 ALKQ9UM73 1620 aa12.96□□□□□ -0.33
RPUSD4-209ENST00000534393 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
RPUSD4-209ENST00000534393 NOS1P29475 1434 aa12.96□□□□□ -0.34
RPUSD4-209ENST00000534393 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-209ENST00000534393 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
RPUSD4-209ENST00000534393 TET3O43151 1660 aa12.94□□□□□ -0.34
RPUSD4-209ENST00000534393 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
RPUSD4-209ENST00000534393 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
RPUSD4-209ENST00000534393 MYO5BQ9ULV0 1848 aa12.92□□□□□ -0.34
RPUSD4-209ENST00000534393 KCNA6P17658 529 aa12.92□□□□□ -0.34
RPUSD4-209ENST00000534393 UNC13BO14795 1591 aa12.9□□□□□ -0.34
RPUSD4-209ENST00000534393 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-209ENST00000534393 BCANQ96GW7 911 aa12.89□□□□□ -0.35
RPUSD4-209ENST00000534393 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
RPUSD4-209ENST00000534393 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms