RNA–Protein interactions for RNA: ENST00000533997.5

ST3GAL3-238, Transcript of ST3 beta-galactoside alpha-2,3-sialyltransferase 3, human

TSL 1 (best)

Gene ST3GAL3, Length 1,007 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ST3GAL3-238	ENST00000533997	SIGLEC1	Q9BZZ2	1709 aa		14.01	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	MADD	Q8WXG6	1647 aa		14.01	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	FAM135A	Q9P2D6	1515 aa		14	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	RIMS1	Q86UR5	1692 aa	Known RBP	13.99	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	FOXD1	Q16676	465 aa		13.99	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	KANK1	Q14678	1352 aa		13.98	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	WASHC2C	Q9Y4E1	1318 aa		13.97	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	PTPRM	P28827	1452 aa		13.97	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	MROH2A	A6NES4	1674 aa		13.97	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	SETD1B	Q9UPS6	1966 aa	Known RBP	13.96	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	ACIN1	Q9UKV3	1341 aa	Known RBP	13.96	□□□□□ -0.17
ST3GAL3-238	ENST00000533997	ANKRD50	Q9ULJ7	1429 aa		13.96	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	RNF17	Q9BXT8	1623 aa	Known RBP	13.95	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	ZC3H13	Q5T200	1668 aa	Known RBP	13.95	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	CLTC	Q00610	1675 aa	Known RBP	13.94	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	PTPRK	Q15262	1439 aa		13.93	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	KDM5D	Q9BY66	1539 aa		13.93	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	ZMYM3	Q14202	1370 aa		13.92	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	DEPDC5	O75140	1603 aa		13.91	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	C3	P01024	1663 aa		13.9	□□□□□ -0.18
ST3GAL3-238	ENST00000533997	PRDM15	P57071	1507 aa	Predicted RBP	13.89	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	GCC2	Q8IWJ2	1684 aa		13.88	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	HFM1	A2PYH4	1435 aa		13.88	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	NPAT	Q14207	1427 aa		13.87	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	CEBPA	P49715	358 aa	Predicted RBP	13.86	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	NAIP	Q13075	1403 aa		13.86	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	CEP152	O94986	1710 aa		13.86	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	ABCC3	O15438	1527 aa		13.85	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	MROH1	Q8NDA8	1641 aa		13.85	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	PREX1	Q8TCU6	1659 aa		13.85	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	UNC13B	O14795	1591 aa		13.84	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	CAMSAP1	Q5T5Y3	1602 aa		13.84	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	PZP	P20742	1482 aa		13.84	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	LMTK2	Q8IWU2	1503 aa		13.84	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	CFAP65	Q6ZU64	1925 aa	Known RBP	13.84	□□□□□ -0.19
ST3GAL3-238	ENST00000533997	ARHGAP31	Q2M1Z3	1444 aa		13.83	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	UHRF1BP1	Q6BDS2	1440 aa		13.83	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	NUP155	O75694	1391 aa		13.83	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	TRIM52	Q96A61	297 aa		13.82	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	VWDE	Q8N2E2	1590 aa		13.82	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	IQGAP3	Q86VI3	1631 aa		13.81	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	TET3	O43151	1660 aa		13.81	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	SETD5	Q9C0A6	1442 aa		13.81	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	RPRD2	Q5VT52	1461 aa	Known RBP	13.8	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	TNR	Q92752	1358 aa		13.79	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	HRC	P23327	699 aa		13.78	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	TRIM26	Q12899	539 aa	Predicted RBP	13.78	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	EFCAB6	Q5THR3	1501 aa		13.78	□□□□□ -0.2
ST3GAL3-238	ENST00000533997	NLRP1	Q9C000	1473 aa		13.77	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	SPATA31D1	Q6ZQQ2	1576 aa		13.76	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.76	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	SLC52A1	Q9NWF4	448 aa		13.76	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	ERVK-7	P63135	1459 aa		13.75	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	MYO3A	Q8NEV4	1616 aa		13.75	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	STAG3	Q9UJ98	1225 aa		13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	ZNF142	P52746	1687 aa	Predicted RBP	13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	A2ML1	A8K2U0	1454 aa		13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	LMTK3	Q96Q04	1460 aa		13.74	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.72	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	DMRT2	Q9Y5R5	561 aa		13.72	□□□□□ -0.21
ST3GAL3-238	ENST00000533997		E9PCH4	1651 aa		13.72	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	RAB3GAP2	Q9H2M9	1393 aa		13.71	□□□□□ -0.21
ST3GAL3-238	ENST00000533997	HDGF	P51858	240 aa	Known RBP	13.7	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	NOS1	P29475	1434 aa		13.7	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	UGGT1	Q9NYU2	1555 aa		13.7	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	KDM5A	P29375	1690 aa	Known RBP	13.69	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	PKD2	Q13563	968 aa		13.69	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	MPHOSPH9	Q99550	1183 aa		13.69	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	SPHKAP	Q2M3C7	1700 aa		13.68	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	HSPA2	P54652	639 aa		13.67	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	PLA2R1	Q13018	1463 aa		13.67	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	IDI1	Q13907	227 aa		13.66	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	ANKLE2	Q86XL3	938 aa		13.66	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	EID1	Q9Y6B2	187 aa		13.65	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	SYNM	O15061	1565 aa		13.65	□□□□□ -0.22
ST3GAL3-238	ENST00000533997	PTPRT	O14522	1441 aa		13.64	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	UBR1	Q8IWV7	1749 aa		13.64	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	KIF1B	O60333	1816 aa		13.64	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	PIK3C2B	O00750	1634 aa		13.64	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	CHGA	P10645	457 aa	Known RBP	13.63	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	TRPM2	O94759	1503 aa		13.62	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	POLR1A	O95602	1720 aa	Predicted RBP	13.61	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	ADGRB3	O60242	1522 aa		13.61	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	STRC	Q7RTU9	1775 aa		13.6	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	CCDC144A	A2RUR9	1427 aa		13.59	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	TXNDC2	Q86VQ3	553 aa		13.59	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	SLIT1	O75093	1534 aa		13.59	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	TMEM2	Q9UHN6	1383 aa		13.58	□□□□□ -0.23
ST3GAL3-238	ENST00000533997	TMEM131L	A2VDJ0	1609 aa		13.58	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	ZNF326	Q5BKZ1	582 aa	Known RBP	13.58	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	NCKAP5L	Q9HCH0	1330 aa		13.58	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	MYO5B	Q9ULV0	1848 aa		13.57	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	PPP1R15A	O75807	674 aa	Predicted RBP	13.57	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	ARHGAP23	Q9P227	1491 aa		13.56	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	RPGRIP1L	Q68CZ1	1315 aa		13.56	□□□□□ -0.24
ST3GAL3-238	ENST00000533997	MED14	O60244	1454 aa		13.55	□□□□□ -0.24

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