RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
SSBP3-215ENST00000533946 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
SSBP3-215ENST00000533946 DAPK1P53355 1430 aa15.09■□□□□ 0.01
SSBP3-215ENST00000533946 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
SSBP3-215ENST00000533946 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
SSBP3-215ENST00000533946 DNMT1P26358 1616 aaKnown RBP15.07■□□□□ 0
SSBP3-215ENST00000533946 CAMSAP1Q5T5Y3 1602 aa15.06■□□□□ 0
SSBP3-215ENST00000533946 CEP152O94986 1710 aa15.06■□□□□ 0
SSBP3-215ENST00000533946 NPATQ14207 1427 aa15.06■□□□□ 0
SSBP3-215ENST00000533946 RNF17Q9BXT8 1623 aaKnown RBP15.06■□□□□ 0
SSBP3-215ENST00000533946 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
SSBP3-215ENST00000533946 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
SSBP3-215ENST00000533946 ABCC3O15438 1527 aa15.04■□□□□ -0
SSBP3-215ENST00000533946 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
SSBP3-215ENST00000533946 NCOA1Q15788 1441 aa15.04■□□□□ -0
SSBP3-215ENST00000533946 KIF15Q9NS87 1388 aa15.04■□□□□ -0
SSBP3-215ENST00000533946 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
SSBP3-215ENST00000533946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
SSBP3-215ENST00000533946 ZNF142P52746 1687 aaPredicted RBP15.02□□□□□ -0.01
SSBP3-215ENST00000533946 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
SSBP3-215ENST00000533946 PZPP20742 1482 aa15.01□□□□□ -0.01
SSBP3-215ENST00000533946 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
SSBP3-215ENST00000533946 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
SSBP3-215ENST00000533946 TNRQ92752 1358 aa15□□□□□ -0.01
SSBP3-215ENST00000533946 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
SSBP3-215ENST00000533946 CERKQ8TCT0 537 aa14.99□□□□□ -0.01
SSBP3-215ENST00000533946 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
SSBP3-215ENST00000533946 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
SSBP3-215ENST00000533946 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
SSBP3-215ENST00000533946 PTPRTO14522 1441 aa14.96□□□□□ -0.01
SSBP3-215ENST00000533946 ITGAEP38570 1179 aa14.96□□□□□ -0.01
SSBP3-215ENST00000533946 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
SSBP3-215ENST00000533946 ZNF335Q9H4Z2 1342 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-215ENST00000533946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.024e-6■□□□□ 8.2
SSBP3-215ENST00000533946 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
SSBP3-215ENST00000533946 NEURL4Q96JN8 1562 aa14.94□□□□□ -0.02
SSBP3-215ENST00000533946 PRDM15P57071 1507 aaPredicted RBP14.94□□□□□ -0.02
SSBP3-215ENST00000533946 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
SSBP3-215ENST00000533946 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
SSBP3-215ENST00000533946 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
SSBP3-215ENST00000533946 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
SSBP3-215ENST00000533946 ZC3H13Q5T200 1668 aaKnown RBP14.92□□□□□ -0.02
SSBP3-215ENST00000533946 VWDEQ8N2E2 1590 aa14.91□□□□□ -0.02
SSBP3-215ENST00000533946 FAM135AQ9P2D6 1515 aa14.91□□□□□ -0.02
SSBP3-215ENST00000533946 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
SSBP3-215ENST00000533946 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
SSBP3-215ENST00000533946 UGGT1Q9NYU2 1555 aa14.89□□□□□ -0.03
SSBP3-215ENST00000533946 ANKRD50Q9ULJ7 1429 aa14.88□□□□□ -0.03
SSBP3-215ENST00000533946 SYNMO15061 1565 aa14.88□□□□□ -0.03
SSBP3-215ENST00000533946 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-215ENST00000533946 UBR1Q8IWV7 1749 aa14.88□□□□□ -0.03
SSBP3-215ENST00000533946 LTKP29376 864 aa14.87□□□□□ -0.03
SSBP3-215ENST00000533946 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
SSBP3-215ENST00000533946 PIK3C2BO00750 1634 aa14.86□□□□□ -0.03
SSBP3-215ENST00000533946 PKD2Q13563 968 aa14.86□□□□□ -0.03
SSBP3-215ENST00000533946 NLRP1Q9C000 1473 aa14.86□□□□□ -0.03
SSBP3-215ENST00000533946 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
SSBP3-215ENST00000533946 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
SSBP3-215ENST00000533946 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
SSBP3-215ENST00000533946 IDI1Q13907 227 aa14.84□□□□□ -0.03
SSBP3-215ENST00000533946 EFCAB6Q5THR3 1501 aa14.83□□□□□ -0.04
SSBP3-215ENST00000533946 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-215ENST00000533946 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
SSBP3-215ENST00000533946 MYO5BQ9ULV0 1848 aa14.81□□□□□ -0.04
SSBP3-215ENST00000533946 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
SSBP3-215ENST00000533946 NOS1P29475 1434 aa14.81□□□□□ -0.04
SSBP3-215ENST00000533946 UNC13BO14795 1591 aa14.81□□□□□ -0.04
SSBP3-215ENST00000533946 KANK1Q14678 1352 aa14.8□□□□□ -0.04
SSBP3-215ENST00000533946 RRBP1Q9P2E9 1410 aaKnown RBP14.8□□□□□ -0.04
SSBP3-215ENST00000533946 E9PCH4 1651 aa14.8□□□□□ -0.04
SSBP3-215ENST00000533946 MED14O60244 1454 aa14.79□□□□□ -0.04
SSBP3-215ENST00000533946 IQGAP1P46940 1657 aa14.79□□□□□ -0.04
SSBP3-215ENST00000533946 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
SSBP3-215ENST00000533946 ARHGAP23Q9P227 1491 aa14.78□□□□□ -0.04
SSBP3-215ENST00000533946 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.05
SSBP3-215ENST00000533946 TET3O43151 1660 aa14.77□□□□□ -0.05
SSBP3-215ENST00000533946 SLIT1O75093 1534 aa14.76□□□□□ -0.05
SSBP3-215ENST00000533946 ALKQ9UM73 1620 aa14.75□□□□□ -0.05
SSBP3-215ENST00000533946 NUTM2DQ5VT03 806 aaPredicted RBP14.75□□□□□ -0.05
SSBP3-215ENST00000533946 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
SSBP3-215ENST00000533946 NUP155O75694 1391 aa14.74□□□□□ -0.05
SSBP3-215ENST00000533946 TMEM2Q9UHN6 1383 aa14.74□□□□□ -0.05
SSBP3-215ENST00000533946 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
SSBP3-215ENST00000533946 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
SSBP3-215ENST00000533946 NAIPQ13075 1403 aa14.74□□□□□ -0.05
SSBP3-215ENST00000533946 UBAP1LF5GYI3 381 aa14.73□□□□□ -0.05
SSBP3-215ENST00000533946 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
SSBP3-215ENST00000533946 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
SSBP3-215ENST00000533946 ADGRB3O60242 1522 aa14.71□□□□□ -0.05
SSBP3-215ENST00000533946 TMEM131LA2VDJ0 1609 aa14.71□□□□□ -0.05
SSBP3-215ENST00000533946 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
SSBP3-215ENST00000533946 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
SSBP3-215ENST00000533946 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
SSBP3-215ENST00000533946 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
SSBP3-215ENST00000533946 ZFYVE9O95405 1425 aa14.68□□□□□ -0.06
SSBP3-215ENST00000533946 RPRD2Q5VT52 1461 aaKnown RBP14.68□□□□□ -0.06
SSBP3-215ENST00000533946 PIP4K2BP78356 416 aa14.67□□□□□ -0.06
SSBP3-215ENST00000533946 IQSEC2Q5JU85 1478 aa14.67□□□□□ -0.06
SSBP3-215ENST00000533946 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
SSBP3-215ENST00000533946 FOXD1Q16676 465 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms