RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.12
UBQLN1-206ENST00000533705 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 ERICH6BQ5W0A0 696 aa8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 COG3Q96JB2 828 aa8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 TRIM6-TRIM34B2RNG4 842 aa8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 SYTL4Q96C24 671 aaPredicted RBP8.02□□□□□ -1.13
UBQLN1-206ENST00000533705 PSME1Q06323 249 aa8.01□□□□□ -1.13
UBQLN1-206ENST00000533705 PHF23Q9BUL5 403 aaPredicted RBP8.01□□□□□ -1.13
UBQLN1-206ENST00000533705 TOMM22Q9NS69 142 aa8.01□□□□□ -1.13
UBQLN1-206ENST00000533705 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
UBQLN1-206ENST00000533705 PMFBP1Q8TBY8 1022 aa8.01□□□□□ -1.13
UBQLN1-206ENST00000533705 TEFQ10587 303 aa8□□□□□ -1.13
UBQLN1-206ENST00000533705 EVC2Q86UK5 1308 aa8□□□□□ -1.13
UBQLN1-206ENST00000533705 NGEFQ8N5V2 710 aa8□□□□□ -1.13
UBQLN1-206ENST00000533705 HTATSF1O43719 755 aaKnown RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 CENPJQ9HC77 1338 aaPredicted RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 AMER1Q5JTC6 1135 aaPredicted RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 DRC7Q8IY82 874 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 KLHL34Q8N239 644 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 WIZO95785 1651 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 ELL2O00472 640 aaPredicted RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 TTC5Q8N0Z6 440 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 ST20-MTHFSA0A0A6YYL1 179 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 ATF3P18847 181 aa7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 RRP7AQ9Y3A4 280 aaKnown RBP7.99□□□□□ -1.13
UBQLN1-206ENST00000533705 CGNL1Q0VF96 1302 aa7.98□□□□□ -1.13
UBQLN1-206ENST00000533705 PHLDB1Q86UU1 1377 aa7.98□□□□□ -1.13
UBQLN1-206ENST00000533705 PANK3Q9H999 370 aa7.98□□□□□ -1.13
UBQLN1-206ENST00000533705 VPS53Q5VIR6 699 aa7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 L1TD1Q5T7N2 865 aaKnown RBP7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 PDE3BQ13370 1112 aa7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 RASSF8Q8NHQ8 419 aa7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 CCDC34Q96HJ3 373 aa7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 CHAF1AQ13111 956 aaPredicted RBP7.97□□□□□ -1.13
UBQLN1-206ENST00000533705 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.96□□□□□ -1.13
UBQLN1-206ENST00000533705 GBP4Q96PP9 640 aa7.96□□□□□ -1.13
UBQLN1-206ENST00000533705 EIF2S2P20042 333 aaKnown RBP7.96□□□□□ -1.14
UBQLN1-206ENST00000533705 KIF15Q9NS87 1388 aa7.96□□□□□ -1.14
UBQLN1-206ENST00000533705 NAP1L5Q96NT1 182 aaPredicted RBP7.96□□□□□ -1.14
UBQLN1-206ENST00000533705 MARCH6O60337 910 aa7.96□□□□□ -1.14
UBQLN1-206ENST00000533705 MFAP1P55081 439 aaKnown RBP7.96□□□□□ -1.14
UBQLN1-206ENST00000533705 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
UBQLN1-206ENST00000533705 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
UBQLN1-206ENST00000533705 NEXNQ0ZGT2 675 aa7.95□□□□□ -1.14
UBQLN1-206ENST00000533705 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 NOL8Q76FK4 1167 aaKnown RBP7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 PTMSP20962 102 aa7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 RAD21O60216 631 aa7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 MSNP26038 577 aaKnown RBP7.94□□□□□ -1.14
UBQLN1-206ENST00000533705 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 NECTIN2Q92692 538 aa7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 NOL10Q9BSC4 688 aaKnown RBP7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 SLKQ9H2G2 1235 aaPredicted RBP7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 SYAP1Q96A49 352 aaPredicted RBP7.93□□□□□ -1.14
UBQLN1-206ENST00000533705 RAPGEF4Q8WZA2 1011 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 C9orf78Q9NZ63 289 aaPredicted RBP7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 KIF3AQ9Y496 699 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 NUTM2GQ5VZR2 741 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 BCL2L13Q9BXK5 485 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 NLRP2Q9NX02 1062 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 TPM4P67936 248 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 PRM3Q9NNZ6 103 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 VPS37DQ86XT2 251 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 CREBRFQ8IUR6 639 aa7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 CTDP1Q9Y5B0 961 aaPredicted RBP7.92□□□□□ -1.14
UBQLN1-206ENST00000533705 DCAF8L1A6NGE4 600 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 RILPL2Q969X0 211 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 USP35Q9P2H5 1018 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 MYOM3Q5VTT5 1437 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 FGD5Q6ZNL6 1462 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 E9PSI1 815 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 PDE4CQ08493 712 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 BICRAQ9NZM4 1560 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 USP47Q96K76 1375 aa7.91□□□□□ -1.14
UBQLN1-206ENST00000533705 AMOTL1Q8IY63 956 aa7.9□□□□□ -1.14
UBQLN1-206ENST00000533705 LRRFIP1Q32MZ4 808 aaKnown RBP7.9□□□□□ -1.14
UBQLN1-206ENST00000533705 ST18O60284 1047 aa7.9□□□□□ -1.14
UBQLN1-206ENST00000533705 PROSER2Q86WR7 435 aaPredicted RBP7.9□□□□□ -1.14
UBQLN1-206ENST00000533705 DDX58O95786 925 aaKnown RBP7.9□□□□□ -1.15
UBQLN1-206ENST00000533705 DHX57Q6P158 1386 aaKnown RBP7.9□□□□□ -1.15
UBQLN1-206ENST00000533705 RAD54L2Q9Y4B4 1467 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 IGF1RP08069 1367 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 AKAP17AQ02040 695 aaKnown RBP7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 FOXD4L1Q9NU39 408 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 NLRP6P59044 892 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 ANKRD45Q5TZF3 282 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 TXNDC2Q86VQ3 553 aa7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 CHMP4CQ96CF2 233 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms