RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ST18O60284 1047 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 TAOK2Q9UL54 1235 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 KIF3AQ9Y496 699 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 ZBED9Q6R2W3 1325 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 FHOD3Q2V2M9 1422 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 CADPSQ9ULU8 1353 aa8.73□□□□□ -1.01
CTNND1-236ENST00000533667 APBB1O00213 710 aa8.72□□□□□ -1.01
CTNND1-236ENST00000533667 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-236ENST00000533667 CCDC144AA2RUR9 1427 aa8.72□□□□□ -1.01
CTNND1-236ENST00000533667 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-236ENST00000533667 KIF3BO15066 747 aa8.71□□□□□ -1.01
CTNND1-236ENST00000533667 MLECQ14165 292 aa8.71□□□□□ -1.01
CTNND1-236ENST00000533667 E9PSI1 815 aa8.71□□□□□ -1.01
CTNND1-236ENST00000533667 CGNL1Q0VF96 1302 aa8.71□□□□□ -1.02
CTNND1-236ENST00000533667 SKOR2Q2VWA4 1001 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-236ENST00000533667 FAM161AQ3B820 660 aa8.71□□□□□ -1.02
CTNND1-236ENST00000533667 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
CTNND1-236ENST00000533667 GZF1Q9H116 711 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-236ENST00000533667 WIZO95785 1651 aa8.7□□□□□ -1.02
CTNND1-236ENST00000533667 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-236ENST00000533667 PRKRIP1Q9H875 184 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-236ENST00000533667 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
CTNND1-236ENST00000533667 GORABQ5T7V8 394 aa8.69□□□□□ -1.02
CTNND1-236ENST00000533667 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.025e-7■■■■□ 21
CTNND1-236ENST00000533667 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
CTNND1-236ENST00000533667 KIF16BQ96L93 1317 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-236ENST00000533667 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 RRP1P56182 461 aaKnown RBP8.68□□□□□ -1.02
CTNND1-236ENST00000533667 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
CTNND1-236ENST00000533667 ZKSCAN2Q63HK3 967 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 FANCIQ9NVI1 1328 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 AAMPQ13685 434 aa8.68□□□□□ -1.02
CTNND1-236ENST00000533667 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 PDE4AP27815 886 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 HSP90B1P14625 803 aaKnown RBP8.67□□□□□ -1.02
CTNND1-236ENST00000533667 CLUAP1Q96AJ1 413 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 PANK3Q9H999 370 aa8.67□□□□□ -1.02
CTNND1-236ENST00000533667 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
CTNND1-236ENST00000533667 USP47Q96K76 1375 aa8.66□□□□□ -1.02
CTNND1-236ENST00000533667 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
CTNND1-236ENST00000533667 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
CTNND1-236ENST00000533667 VGFO15240 615 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-236ENST00000533667 AMPHP49418 695 aa8.65□□□□□ -1.02
CTNND1-236ENST00000533667 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
CTNND1-236ENST00000533667 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
CTNND1-236ENST00000533667 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
CTNND1-236ENST00000533667 ATAD2BQ9ULI0 1458 aa8.65□□□□□ -1.02
CTNND1-236ENST00000533667 NGDNQ8NEJ9 315 aaKnown RBP8.65□□□□□ -1.03
CTNND1-236ENST00000533667 JPH4Q96JJ6 628 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 SMARCA4P51532 1647 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 CUX1P39880 1505 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 GSE1Q14687 1217 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 TMX4Q9H1E5 349 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-236ENST00000533667 ROCK1Q13464 1354 aa8.64□□□□□ -1.03
CTNND1-236ENST00000533667 CLSTN1O94985 981 aa8.63□□□□□ -1.03
CTNND1-236ENST00000533667 MYOM3Q5VTT5 1437 aa8.63□□□□□ -1.03
CTNND1-236ENST00000533667 REC8O95072 547 aa8.63□□□□□ -1.03
CTNND1-236ENST00000533667 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
CTNND1-236ENST00000533667 NOC3LQ8WTT2 800 aaKnown RBP8.63□□□□□ -1.03
CTNND1-236ENST00000533667 TPM3P06753 285 aa8.63□□□□□ -1.03
CTNND1-236ENST00000533667 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
CTNND1-236ENST00000533667 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
CTNND1-236ENST00000533667 SF3A1Q15459 793 aaKnown RBP8.62□□□□□ -1.03
CTNND1-236ENST00000533667 RUFY2Q8WXA3 655 aa8.62□□□□□ -1.03
CTNND1-236ENST00000533667 API5Q9BZZ5 524 aaKnown RBP8.62□□□□□ -1.03
CTNND1-236ENST00000533667 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
CTNND1-236ENST00000533667 COG3Q96JB2 828 aa8.62□□□□□ -1.03
CTNND1-236ENST00000533667 MIA2Q96PC5 1412 aa8.62□□□□□ -1.03
CTNND1-236ENST00000533667 EXOC6Q8TAG9 804 aa8.62□□□□□ -1.03
CTNND1-236ENST00000533667 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
CTNND1-236ENST00000533667 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
CTNND1-236ENST00000533667 TRHP20396 242 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-236ENST00000533667 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-236ENST00000533667 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
CTNND1-236ENST00000533667 H3BQV1 296 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 RASSF8Q8NHQ8 419 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.032e-8■□□□□ 11.3
CTNND1-236ENST00000533667 CHMP5Q9NZZ3 219 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 GOLGA6L19H0YKK7 550 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 FAM184AQ8NB25 1140 aa8.6□□□□□ -1.03
CTNND1-236ENST00000533667 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 PTPRGP23470 1445 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 FANCD2Q9BXW9 1451 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.03
CTNND1-236ENST00000533667 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
CTNND1-236ENST00000533667 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
CTNND1-236ENST00000533667 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 CNTLNQ9NXG0 1405 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 CCDC7Q96M83 1385 aa8.59□□□□□ -1.03
CTNND1-236ENST00000533667 ZKSCAN1P17029 563 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-236ENST00000533667 NOL8Q76FK4 1167 aaKnown RBP8.59□□□□□ -1.04
CTNND1-236ENST00000533667 DIAPH3Q9NSV4 1193 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms