RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 RRP7BPQ9NSQ0 103 aa31.9■■■□□ 2.7
VPS51-211ENST00000533487 CHIC2Q9UKJ5 165 aa31.9■■■□□ 2.7
VPS51-211ENST00000533487 PTPRKQ15262 1439 aa31.88■■■□□ 2.69
VPS51-211ENST00000533487 GGT6Q6P531 493 aa31.87■■■□□ 2.69
VPS51-211ENST00000533487 ZC3H13Q5T200 1668 aaKnown RBP31.84■■■□□ 2.69
VPS51-211ENST00000533487 DEPDC5O75140 1603 aa31.82■■■□□ 2.69
VPS51-211ENST00000533487 KDM5DQ9BY66 1539 aa31.82■■■□□ 2.68
VPS51-211ENST00000533487 CLTCQ00610 1675 aaKnown RBP31.82■■■□□ 2.68
VPS51-211ENST00000533487 C3P01024 1663 aa31.81■■■□□ 2.68
VPS51-211ENST00000533487 ANKRD50Q9ULJ7 1429 aa31.81■■■□□ 2.68
VPS51-211ENST00000533487 SETD1BQ9UPS6 1966 aaKnown RBP31.79■■■□□ 2.68
VPS51-211ENST00000533487 PRDM15P57071 1507 aaPredicted RBP31.79■■■□□ 2.68
VPS51-211ENST00000533487 MROH1Q8NDA8 1641 aa31.77■■■□□ 2.68
VPS51-211ENST00000533487 ITGAEP38570 1179 aa31.75■■■□□ 2.67
VPS51-211ENST00000533487 ZMYM3Q14202 1370 aa31.75■■■□□ 2.67
VPS51-211ENST00000533487 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
VPS51-211ENST00000533487 NPATQ14207 1427 aa31.73■■■□□ 2.67
VPS51-211ENST00000533487 KANK1Q14678 1352 aa31.72■■■□□ 2.67
VPS51-211ENST00000533487 ABCC3O15438 1527 aa31.7■■■□□ 2.66
VPS51-211ENST00000533487 GCC2Q8IWJ2 1684 aa31.68■■■□□ 2.66
VPS51-211ENST00000533487 VWDEQ8N2E2 1590 aa31.67■■■□□ 2.66
VPS51-211ENST00000533487 PREX1Q8TCU6 1659 aa31.67■■■□□ 2.66
VPS51-211ENST00000533487 UNC13BO14795 1591 aa31.65■■■□□ 2.66
VPS51-211ENST00000533487 PZPP20742 1482 aa31.65■■■□□ 2.66
VPS51-211ENST00000533487 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
VPS51-211ENST00000533487 CEP152O94986 1710 aa31.64■■■□□ 2.66
VPS51-211ENST00000533487 HFM1A2PYH4 1435 aa31.64■■■□□ 2.66
VPS51-211ENST00000533487 CEBPAP49715 358 aaPredicted RBP31.63■■■□□ 2.65
VPS51-211ENST00000533487 CAMSAP1Q5T5Y3 1602 aa31.63■■■□□ 2.65
VPS51-211ENST00000533487 NAIPQ13075 1403 aa31.6■■■□□ 2.65
VPS51-211ENST00000533487 ARHGAP31Q2M1Z3 1444 aa31.6■■■□□ 2.65
VPS51-211ENST00000533487 PLPPR3Q6T4P5 718 aa31.57■■■□□ 2.64
VPS51-211ENST00000533487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.56■■■□□ 2.644e-6■□□□□ 8.4
VPS51-211ENST00000533487 UHRF1BP1Q6BDS2 1440 aa31.56■■■□□ 2.64
VPS51-211ENST00000533487 ACIN1Q9UKV3 1341 aaKnown RBP31.55■■■□□ 2.64
VPS51-211ENST00000533487 LMTK3Q96Q04 1460 aa31.54■■■□□ 2.64
VPS51-211ENST00000533487 IQGAP3Q86VI3 1631 aa31.53■■■□□ 2.64
VPS51-211ENST00000533487 TET3O43151 1660 aa31.52■■■□□ 2.64
VPS51-211ENST00000533487 SPATA31D1Q6ZQQ2 1576 aa31.51■■■□□ 2.63
VPS51-211ENST00000533487 EFCAB6Q5THR3 1501 aa31.5■■■□□ 2.63
VPS51-211ENST00000533487 RPRD2Q5VT52 1461 aaKnown RBP31.5■■■□□ 2.63
VPS51-211ENST00000533487 MYO3AQ8NEV4 1616 aa31.48■■■□□ 2.63
VPS51-211ENST00000533487 ZNF142P52746 1687 aaPredicted RBP31.48■■■□□ 2.63
VPS51-211ENST00000533487 TNRQ92752 1358 aa31.46■■■□□ 2.63
VPS51-211ENST00000533487 ERVK-7P63135 1459 aa31.45■■■□□ 2.62
VPS51-211ENST00000533487 NUP155O75694 1391 aa31.44■■■□□ 2.62
VPS51-211ENST00000533487 NLRP1Q9C000 1473 aa31.44■■■□□ 2.62
VPS51-211ENST00000533487 CFAP65Q6ZU64 1925 aaKnown RBP31.4■■■□□ 2.62
VPS51-211ENST00000533487 CEP170BQ9Y4F5 1589 aaPredicted RBP31.4■■■□□ 2.62
VPS51-211ENST00000533487 FBXO31Q5XUX0 539 aaPredicted RBP31.4■■■□□ 2.62
VPS51-211ENST00000533487 A2ML1A8K2U0 1454 aa31.39■■■□□ 2.62
VPS51-211ENST00000533487 SETD5Q9C0A6 1442 aa31.37■■■□□ 2.61
VPS51-211ENST00000533487 NOS1P29475 1434 aa31.34■■■□□ 2.61
VPS51-211ENST00000533487 E9PCH4 1651 aa31.34■■■□□ 2.61
VPS51-211ENST00000533487 KDM5AP29375 1690 aaKnown RBP31.3■■■□□ 2.6
VPS51-211ENST00000533487 PLA2R1Q13018 1463 aa31.28■■■□□ 2.6
VPS51-211ENST00000533487 HRCP23327 699 aa31.28■■■□□ 2.6
VPS51-211ENST00000533487 SLC52A1Q9NWF4 448 aa31.27■■■□□ 2.6
VPS51-211ENST00000533487 TRIM52Q96A61 297 aa31.26■■■□□ 2.59
VPS51-211ENST00000533487 UGGT1Q9NYU2 1555 aa31.26■■■□□ 2.59
VPS51-211ENST00000533487 HSPA2P54652 639 aa31.25■■■□□ 2.59
VPS51-211ENST00000533487 SYNMO15061 1565 aa31.25■■■□□ 2.59
VPS51-211ENST00000533487 THEMISQ8N1K5 641 aaPredicted RBP31.24■■■□□ 2.59
VPS51-211ENST00000533487 UBR1Q8IWV7 1749 aa31.21■■■□□ 2.59
VPS51-211ENST00000533487 RAB3GAP2Q9H2M9 1393 aa31.2■■■□□ 2.59
VPS51-211ENST00000533487 SPHKAPQ2M3C7 1700 aa31.2■■■□□ 2.58
VPS51-211ENST00000533487 DMRT2Q9Y5R5 561 aa31.19■■■□□ 2.58
VPS51-211ENST00000533487 PIK3C2BO00750 1634 aa31.19■■■□□ 2.58
VPS51-211ENST00000533487 STRCQ7RTU9 1775 aa31.18■■■□□ 2.58
VPS51-211ENST00000533487 PTPRTO14522 1441 aa31.17■■■□□ 2.58
VPS51-211ENST00000533487 SLC4A1APQ9BWU0 796 aaKnown RBP31.17■■■□□ 2.58
VPS51-211ENST00000533487 PKD2Q13563 968 aa31.16■■■□□ 2.58
VPS51-211ENST00000533487 IDI1Q13907 227 aa31.13■■■□□ 2.57
VPS51-211ENST00000533487 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
VPS51-211ENST00000533487 ADGRB3O60242 1522 aa31.12■■■□□ 2.57
VPS51-211ENST00000533487 POLR1AO95602 1720 aaPredicted RBP31.12■■■□□ 2.57
VPS51-211ENST00000533487 TRPM2O94759 1503 aa31.11■■■□□ 2.57
VPS51-211ENST00000533487 SLIT1O75093 1534 aa31.09■■■□□ 2.57
VPS51-211ENST00000533487 STAG3Q9UJ98 1225 aa31.09■■■□□ 2.57
VPS51-211ENST00000533487 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
VPS51-211ENST00000533487 ARHGAP23Q9P227 1491 aa31.07■■■□□ 2.56
VPS51-211ENST00000533487 ANKLE2Q86XL3 938 aa31.06■■■□□ 2.56
VPS51-211ENST00000533487 TMEM131LA2VDJ0 1609 aa31.05■■■□□ 2.56
VPS51-211ENST00000533487 TMEM2Q9UHN6 1383 aa31.02■■■□□ 2.56
VPS51-211ENST00000533487 MED14O60244 1454 aa31.01■■■□□ 2.56
VPS51-211ENST00000533487 KIF1BO60333 1816 aa30.99■■■□□ 2.55
VPS51-211ENST00000533487 HDGFP51858 240 aaKnown RBP30.99■■■□□ 2.55
VPS51-211ENST00000533487 EID1Q9Y6B2 187 aa30.98■■■□□ 2.55
VPS51-211ENST00000533487 MYO5BQ9ULV0 1848 aa30.98■■■□□ 2.55
VPS51-211ENST00000533487 NEURL4Q96JN8 1562 aa30.97■■■□□ 2.55
VPS51-211ENST00000533487 SCAF11Q99590 1463 aaKnown RBP30.97■■■□□ 2.55
VPS51-211ENST00000533487 NCKAP5LQ9HCH0 1330 aa30.97■■■□□ 2.55
VPS51-211ENST00000533487 CLTCL1P53675 1640 aa30.96■■■□□ 2.55
VPS51-211ENST00000533487 IQGAP1P46940 1657 aa30.92■■■□□ 2.54
VPS51-211ENST00000533487 NPHP4O75161 1426 aaPredicted RBP30.91■■■□□ 2.54
VPS51-211ENST00000533487 TXNDC2Q86VQ3 553 aa30.91■■■□□ 2.54
VPS51-211ENST00000533487 CCDC144AA2RUR9 1427 aa30.9■■■□□ 2.54
VPS51-211ENST00000533487 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.9■■■□□ 2.54
VPS51-211ENST00000533487 ZFYVE9O95405 1425 aa30.89■■■□□ 2.53
VPS51-211ENST00000533487 CHGAP10645 457 aaKnown RBP30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms