RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
NXF1-215ENST00000533440 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
NXF1-215ENST00000533440 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
NXF1-215ENST00000533440 TNRQ92752 1358 aa12.8□□□□□ -0.36
NXF1-215ENST00000533440 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
NXF1-215ENST00000533440 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
NXF1-215ENST00000533440 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
NXF1-215ENST00000533440 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
NXF1-215ENST00000533440 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
NXF1-215ENST00000533440 MED14O60244 1454 aa12.78□□□□□ -0.36
NXF1-215ENST00000533440 PZPP20742 1482 aa12.78□□□□□ -0.36
NXF1-215ENST00000533440 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
NXF1-215ENST00000533440 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
NXF1-215ENST00000533440 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
NXF1-215ENST00000533440 THEMISQ8N1K5 641 aaPredicted RBP12.76□□□□□ -0.37
NXF1-215ENST00000533440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
NXF1-215ENST00000533440 DEPDC5O75140 1603 aa12.75□□□□□ -0.37
NXF1-215ENST00000533440 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
NXF1-215ENST00000533440 KDM5DQ9BY66 1539 aa12.75□□□□□ -0.37
NXF1-215ENST00000533440 TIAM1Q13009 1591 aa12.74□□□□□ -0.37
NXF1-215ENST00000533440 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
NXF1-215ENST00000533440 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
NXF1-215ENST00000533440 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
NXF1-215ENST00000533440 UGGT1Q9NYU2 1555 aa12.73□□□□□ -0.37
NXF1-215ENST00000533440 KIF3BO15066 747 aa12.73□□□□□ -0.37
NXF1-215ENST00000533440 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
NXF1-215ENST00000533440 FOXD1Q16676 465 aa12.71□□□□□ -0.37
NXF1-215ENST00000533440 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
NXF1-215ENST00000533440 STRCP1A6NGW2 1772 aa12.7□□□□□ -0.38
NXF1-215ENST00000533440 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
NXF1-215ENST00000533440 CCDC141Q6ZP82 1450 aa12.69□□□□□ -0.38
NXF1-215ENST00000533440 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
NXF1-215ENST00000533440 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
NXF1-215ENST00000533440 SYNMO15061 1565 aa12.69□□□□□ -0.38
NXF1-215ENST00000533440 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
NXF1-215ENST00000533440 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
NXF1-215ENST00000533440 RGS17Q9UGC6 210 aaPredicted RBP12.68□□□□□ -0.38
NXF1-215ENST00000533440 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
NXF1-215ENST00000533440 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
NXF1-215ENST00000533440 ABCC3O15438 1527 aa12.63□□□□□ -0.39
NXF1-215ENST00000533440 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
NXF1-215ENST00000533440 ERVK-7P63135 1459 aa12.62□□□□□ -0.39
NXF1-215ENST00000533440 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
NXF1-215ENST00000533440 SCAF11Q99590 1463 aaKnown RBP12.6□□□□□ -0.39
NXF1-215ENST00000533440 ARHGAP23Q9P227 1491 aa12.6□□□□□ -0.39
NXF1-215ENST00000533440 UBR1Q8IWV7 1749 aa12.6□□□□□ -0.39
NXF1-215ENST00000533440 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
NXF1-215ENST00000533440 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
NXF1-215ENST00000533440 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
NXF1-215ENST00000533440 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
NXF1-215ENST00000533440 SLIT1O75093 1534 aa12.59□□□□□ -0.39
NXF1-215ENST00000533440 LTKP29376 864 aa12.59□□□□□ -0.39
NXF1-215ENST00000533440 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
NXF1-215ENST00000533440 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
NXF1-215ENST00000533440 EIF2AK4Q9P2K8 1649 aaKnown RBP12.58□□□□□ -0.4
NXF1-215ENST00000533440 MAST1Q9Y2H9 1570 aa12.57□□□□□ -0.4
NXF1-215ENST00000533440 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
NXF1-215ENST00000533440 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
NXF1-215ENST00000533440 CEP152O94986 1710 aa12.54□□□□□ -0.4
NXF1-215ENST00000533440 CFAP65Q6ZU64 1925 aaKnown RBP12.53□□□□□ -0.4
NXF1-215ENST00000533440 EID1Q9Y6B2 187 aa12.52□□□□□ -0.41
NXF1-215ENST00000533440 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
NXF1-215ENST00000533440 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.41
NXF1-215ENST00000533440 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
NXF1-215ENST00000533440 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
NXF1-215ENST00000533440 KCNA6P17658 529 aa12.5□□□□□ -0.41
NXF1-215ENST00000533440 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
NXF1-215ENST00000533440 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
NXF1-215ENST00000533440 PIK3C2BO00750 1634 aa12.49□□□□□ -0.41
NXF1-215ENST00000533440 TET3O43151 1660 aa12.48□□□□□ -0.41
NXF1-215ENST00000533440 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
NXF1-215ENST00000533440 KDM5AP29375 1690 aaKnown RBP12.48□□□□□ -0.41
NXF1-215ENST00000533440 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
NXF1-215ENST00000533440 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
NXF1-215ENST00000533440 EFCAB6Q5THR3 1501 aa12.46□□□□□ -0.42
NXF1-215ENST00000533440 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.42
NXF1-215ENST00000533440 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
NXF1-215ENST00000533440 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
NXF1-215ENST00000533440 NWD1Q149M9 1564 aa12.45□□□□□ -0.42
NXF1-215ENST00000533440 IDI1Q13907 227 aa12.45□□□□□ -0.42
NXF1-215ENST00000533440 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
NXF1-215ENST00000533440 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
NXF1-215ENST00000533440 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
NXF1-215ENST00000533440 JCADQ9P266 1359 aa12.44□□□□□ -0.42
NXF1-215ENST00000533440 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
NXF1-215ENST00000533440 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
NXF1-215ENST00000533440 MSH6P52701 1360 aa12.43□□□□□ -0.42
NXF1-215ENST00000533440 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
NXF1-215ENST00000533440 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
NXF1-215ENST00000533440 ABCC5O15440 1437 aa12.41□□□□□ -0.42
NXF1-215ENST00000533440 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
NXF1-215ENST00000533440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■□□□ 13.4
NXF1-215ENST00000533440 KANK1Q14678 1352 aa12.41□□□□□ -0.42
NXF1-215ENST00000533440 COL16A1Q07092 1604 aaPredicted RBP12.4□□□□□ -0.42
NXF1-215ENST00000533440 NOS1P29475 1434 aa12.4□□□□□ -0.42
NXF1-215ENST00000533440 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
NXF1-215ENST00000533440 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
NXF1-215ENST00000533440 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
NXF1-215ENST00000533440 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
NXF1-215ENST00000533440 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms