RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	ITGAE	P38570	1179 aa		34.05	■■■■□ 3.04
SIPA1-208	ENST00000533361	WASHC2C	Q9Y4E1	1318 aa		34.04	■■■■□ 3.04
SIPA1-208	ENST00000533361	MROH2A	A6NES4	1674 aa		34.02	■■■■□ 3.04
SIPA1-208	ENST00000533361	NCOA1	Q15788	1441 aa		34	■■■■□ 3.03
SIPA1-208	ENST00000533361	LMTK3	Q96Q04	1460 aa		34	■■■■□ 3.03
SIPA1-208	ENST00000533361	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.99	■■■■□ 3.03
SIPA1-208	ENST00000533361	ERBIN	Q96RT1	1412 aa		33.97	■■■■□ 3.03
SIPA1-208	ENST00000533361	ADGRL2	O95490	1459 aa		33.96	■■■■□ 3.03
SIPA1-208	ENST00000533361	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.96	■■■■□ 3.03
SIPA1-208	ENST00000533361	KDM5D	Q9BY66	1539 aa		33.94	■■■■□ 3.02
SIPA1-208	ENST00000533361	PTPRK	Q15262	1439 aa		33.94	■■■■□ 3.02
SIPA1-208	ENST00000533361	RNF17	Q9BXT8	1623 aa	Known RBP	33.93	■■■■□ 3.02
SIPA1-208	ENST00000533361	HSPA2	P54652	639 aa		33.93	■■■■□ 3.02
SIPA1-208	ENST00000533361	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.93	■■■■□ 3.02
SIPA1-208	ENST00000533361	SETD1B	Q9UPS6	1966 aa	Known RBP	33.92	■■■■□ 3.02
SIPA1-208	ENST00000533361	PREX1	Q8TCU6	1659 aa		33.91	■■■■□ 3.02
SIPA1-208	ENST00000533361	UHRF1BP1	Q6BDS2	1440 aa		33.91	■■■■□ 3.02
SIPA1-208	ENST00000533361	FAM135A	Q9P2D6	1515 aa		33.9	■■■■□ 3.02
SIPA1-208	ENST00000533361	RRBP1	Q9P2E9	1410 aa	Known RBP	33.9	■■■■□ 3.02
SIPA1-208	ENST00000533361	NPAT	Q14207	1427 aa		33.87	■■■■□ 3.01
SIPA1-208	ENST00000533361	ANKRD50	Q9ULJ7	1429 aa		33.84	■■■■□ 3.01
SIPA1-208	ENST00000533361	KANK1	Q14678	1352 aa		33.84	■■■■□ 3.01
SIPA1-208	ENST00000533361	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.83	■■■■□ 3.01
SIPA1-208	ENST00000533361	ROCK1	Q13464	1354 aa		33.83	■■■■□ 3.01
SIPA1-208	ENST00000533361	MROH1	Q8NDA8	1641 aa		33.82	■■■■□ 3.01
SIPA1-208	ENST00000533361	ABCC3	O15438	1527 aa		33.82	■■■■□ 3
SIPA1-208	ENST00000533361	ZC3H13	Q5T200	1668 aa	Known RBP	33.8	■■■■□ 3
SIPA1-208	ENST00000533361	PZP	P20742	1482 aa		33.78	■■■■□ 3
SIPA1-208	ENST00000533361	CEP152	O94986	1710 aa		33.77	■■■■□ 3
SIPA1-208	ENST00000533361	PRDM15	P57071	1507 aa	Predicted RBP	33.77	■■■■□ 3
SIPA1-208	ENST00000533361	DEPDC5	O75140	1603 aa		33.75	■■■□□ 2.99
SIPA1-208	ENST00000533361	TNR	Q92752	1358 aa		33.73	■■■□□ 2.99
SIPA1-208	ENST00000533361	CAMSAP1	Q5T5Y3	1602 aa		33.7	■■■□□ 2.99
SIPA1-208	ENST00000533361	MYO3A	Q8NEV4	1616 aa		33.68	■■■□□ 2.98
SIPA1-208	ENST00000533361	CFAP65	Q6ZU64	1925 aa	Known RBP	33.64	■■■□□ 2.98
SIPA1-208	ENST00000533361	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.62	■■■□□ 2.97
SIPA1-208	ENST00000533361	VWDE	Q8N2E2	1590 aa		33.61	■■■□□ 2.97
SIPA1-208	ENST00000533361	ARHGAP31	Q2M1Z3	1444 aa		33.61	■■■□□ 2.97
SIPA1-208	ENST00000533361	A2ML1	A8K2U0	1454 aa		33.6	■■■□□ 2.97
SIPA1-208	ENST00000533361	ERVK-7	P63135	1459 aa		33.6	■■■□□ 2.97
SIPA1-208	ENST00000533361	LMTK2	Q8IWU2	1503 aa		33.59	■■■□□ 2.97
SIPA1-208	ENST00000533361	ZNF142	P52746	1687 aa	Predicted RBP	33.58	■■■□□ 2.97
SIPA1-208	ENST00000533361	SPATA31D1	Q6ZQQ2	1576 aa		33.57	■■■□□ 2.96
SIPA1-208	ENST00000533361	UNC13B	O14795	1591 aa		33.55	■■■□□ 2.96
SIPA1-208	ENST00000533361	CERK	Q8TCT0	537 aa		33.55	■■■□□ 2.96
SIPA1-208	ENST00000533361	DMRT2	Q9Y5R5	561 aa		33.55	■■■□□ 2.96
SIPA1-208	ENST00000533361	NLRP1	Q9C000	1473 aa		33.55	■■■□□ 2.96
SIPA1-208	ENST00000533361	NUP155	O75694	1391 aa		33.54	■■■□□ 2.96
SIPA1-208	ENST00000533361	NAIP	Q13075	1403 aa		33.53	■■■□□ 2.96
SIPA1-208	ENST00000533361	STRC	Q7RTU9	1775 aa		33.51	■■■□□ 2.95
SIPA1-208	ENST00000533361	EFCAB6	Q5THR3	1501 aa		33.5	■■■□□ 2.95
SIPA1-208	ENST00000533361	NCKAP5L	Q9HCH0	1330 aa		33.5	■■■□□ 2.95
SIPA1-208	ENST00000533361	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.49	■■■□□ 2.95
SIPA1-208	ENST00000533361	UGGT1	Q9NYU2	1555 aa		33.47	■■■□□ 2.95
SIPA1-208	ENST00000533361	HFM1	A2PYH4	1435 aa		33.46	■■■□□ 2.95
SIPA1-208	ENST00000533361	TET3	O43151	1660 aa		33.46	■■■□□ 2.95
SIPA1-208	ENST00000533361	GCC2	Q8IWJ2	1684 aa		33.46	■■■□□ 2.95
SIPA1-208	ENST00000533361	PLA2R1	Q13018	1463 aa		33.44	■■■□□ 2.94
SIPA1-208	ENST00000533361	PKD2	Q13563	968 aa		33.43	■■■□□ 2.94
SIPA1-208	ENST00000533361	TRIM52	Q96A61	297 aa		33.43	■■■□□ 2.94
SIPA1-208	ENST00000533361	IQGAP3	Q86VI3	1631 aa		33.42	■■■□□ 2.94
SIPA1-208	ENST00000533361	STAG3	Q9UJ98	1225 aa		33.42	■■■□□ 2.94
SIPA1-208	ENST00000533361	RPRD2	Q5VT52	1461 aa	Known RBP	33.4	■■■□□ 2.94
SIPA1-208	ENST00000533361	PTPRT	O14522	1441 aa		33.38	■■■□□ 2.93
SIPA1-208	ENST00000533361	NOS1	P29475	1434 aa		33.37	■■■□□ 2.93
SIPA1-208	ENST00000533361	IDI1	Q13907	227 aa		33.37	■■■□□ 2.93
SIPA1-208	ENST00000533361	ANKLE2	Q86XL3	938 aa		33.37	■■■□□ 2.93
SIPA1-208	ENST00000533361	SLC52A1	Q9NWF4	448 aa		33.34	■■■□□ 2.93
SIPA1-208	ENST00000533361	SYNM	O15061	1565 aa		33.34	■■■□□ 2.93
SIPA1-208	ENST00000533361		E9PCH4	1651 aa		33.33	■■■□□ 2.93
SIPA1-208	ENST00000533361	PIK3C2B	O00750	1634 aa		33.31	■■■□□ 2.92
SIPA1-208	ENST00000533361	UBR1	Q8IWV7	1749 aa		33.31	■■■□□ 2.92
SIPA1-208	ENST00000533361	POLR1A	O95602	1720 aa	Predicted RBP	33.25	■■■□□ 2.91
SIPA1-208	ENST00000533361	CHGA	P10645	457 aa	Known RBP	33.24	■■■□□ 2.91
SIPA1-208	ENST00000533361	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.23	■■■□□ 2.91
SIPA1-208	ENST00000533361	EID1	Q9Y6B2	187 aa		33.23	■■■□□ 2.91
SIPA1-208	ENST00000533361	SETD5	Q9C0A6	1442 aa		33.22	■■■□□ 2.91
SIPA1-208	ENST00000533361	TXNDC2	Q86VQ3	553 aa		33.22	■■■□□ 2.91
SIPA1-208	ENST00000533361	NPHP4	O75161	1426 aa	Predicted RBP	33.19	■■■□□ 2.9
SIPA1-208	ENST00000533361	NEURL4	Q96JN8	1562 aa		33.18	■■■□□ 2.9
SIPA1-208	ENST00000533361	TMEM2	Q9UHN6	1383 aa		33.18	■■■□□ 2.9
SIPA1-208	ENST00000533361	ADGRB3	O60242	1522 aa		33.18	■■■□□ 2.9
SIPA1-208	ENST00000533361	LTK	P29376	864 aa		33.16	■■■□□ 2.9
SIPA1-208	ENST00000533361	SLIT1	O75093	1534 aa		33.16	■■■□□ 2.9
SIPA1-208	ENST00000533361	KDM5A	P29375	1690 aa	Known RBP	33.16	■■■□□ 2.9
SIPA1-208	ENST00000533361	ARHGAP23	Q9P227	1491 aa		33.15	■■■□□ 2.9
SIPA1-208	ENST00000533361	SCAF11	Q99590	1463 aa	Known RBP	33.14	■■■□□ 2.9
SIPA1-208	ENST00000533361	MED14	O60244	1454 aa		33.13	■■■□□ 2.89
SIPA1-208	ENST00000533361	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.13	■■■□□ 2.89
SIPA1-208	ENST00000533361	ACIN1	Q9UKV3	1341 aa	Known RBP	33.12	■■■□□ 2.89
SIPA1-208	ENST00000533361	SPHKAP	Q2M3C7	1700 aa		33.11	■■■□□ 2.89
SIPA1-208	ENST00000533361	RAB3GAP2	Q9H2M9	1393 aa		33.09	■■■□□ 2.89
SIPA1-208	ENST00000533361	IQGAP1	P46940	1657 aa		33.08	■■■□□ 2.89
SIPA1-208	ENST00000533361	HDGF	P51858	240 aa	Known RBP	33.08	■■■□□ 2.89
SIPA1-208	ENST00000533361	MPHOSPH9	Q99550	1183 aa		33.08	■■■□□ 2.89
SIPA1-208	ENST00000533361	TMEM131L	A2VDJ0	1609 aa		33.06	■■■□□ 2.88
SIPA1-208	ENST00000533361	BCAN	Q96GW7	911 aa		33.06	■■■□□ 2.88
SIPA1-208	ENST00000533361	MYO5B	Q9ULV0	1848 aa		33.06	■■■□□ 2.88
SIPA1-208	ENST00000533361	PPP1R15A	O75807	674 aa	Predicted RBP	33.05	■■■□□ 2.88
SIPA1-208	ENST00000533361	FOXD1	Q16676	465 aa		33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms