RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
RPUSD4-207ENST00000532800 DNMT1P26358 1616 aaKnown RBP27.11■■□□□ 1.93
RPUSD4-207ENST00000532800 A2ML1A8K2U0 1454 aa27.11■■□□□ 1.93
RPUSD4-207ENST00000532800 FAM135AQ9P2D6 1515 aa27.11■■□□□ 1.93
RPUSD4-207ENST00000532800 PZPP20742 1482 aa27.1■■□□□ 1.93
RPUSD4-207ENST00000532800 TSPY4P0CV99 314 aa27.09■■□□□ 1.93
RPUSD4-207ENST00000532800 TSPY10P0CW01 314 aa27.09■■□□□ 1.93
RPUSD4-207ENST00000532800 FBXO31Q5XUX0 539 aaPredicted RBP27.09■■□□□ 1.93
RPUSD4-207ENST00000532800 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
RPUSD4-207ENST00000532800 PKD2Q13563 968 aa27.07■■□□□ 1.92
RPUSD4-207ENST00000532800 ZNF335Q9H4Z2 1342 aaPredicted RBP27.07■■□□□ 1.92
RPUSD4-207ENST00000532800 TNRQ92752 1358 aa27.07■■□□□ 1.92
RPUSD4-207ENST00000532800 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
RPUSD4-207ENST00000532800 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
RPUSD4-207ENST00000532800 WASHC2CQ9Y4E1 1318 aa27.05■■□□□ 1.92
RPUSD4-207ENST00000532800 RNF17Q9BXT8 1623 aaKnown RBP27.04■■□□□ 1.92
RPUSD4-207ENST00000532800 MIA2Q96PC5 1412 aa27.02■■□□□ 1.92
RPUSD4-207ENST00000532800 POLR1AO95602 1720 aaPredicted RBP27.01■■□□□ 1.91
RPUSD4-207ENST00000532800 EIF2AK4Q9P2K8 1649 aaKnown RBP26.99■■□□□ 1.91
RPUSD4-207ENST00000532800 NEURL4Q96JN8 1562 aa26.98■■□□□ 1.91
RPUSD4-207ENST00000532800 ABCC3O15438 1527 aa26.98■■□□□ 1.91
RPUSD4-207ENST00000532800 ZC3H13Q5T200 1668 aaKnown RBP26.97■■□□□ 1.91
RPUSD4-207ENST00000532800 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
RPUSD4-207ENST00000532800 NLRP1Q9C000 1473 aa26.93■■□□□ 1.9
RPUSD4-207ENST00000532800 CROCC2H7BZ55 1655 aa26.93■■□□□ 1.9
RPUSD4-207ENST00000532800 CEP152O94986 1710 aa26.93■■□□□ 1.9
RPUSD4-207ENST00000532800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.92■■□□□ 1.9
RPUSD4-207ENST00000532800 UGGT1Q9NYU2 1555 aa26.92■■□□□ 1.9
RPUSD4-207ENST00000532800 PTPN23Q9H3S7 1636 aa26.91■■□□□ 1.9
RPUSD4-207ENST00000532800 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
RPUSD4-207ENST00000532800 SPATA31D1Q6ZQQ2 1576 aa26.9■■□□□ 1.9
RPUSD4-207ENST00000532800 ABCC5O15440 1437 aa26.88■■□□□ 1.89
RPUSD4-207ENST00000532800 ERVK-7P63135 1459 aa26.87■■□□□ 1.89
RPUSD4-207ENST00000532800 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
RPUSD4-207ENST00000532800 DISP3Q9P2K9 1392 aa26.86■■□□□ 1.89
RPUSD4-207ENST00000532800 KIF15Q9NS87 1388 aa26.85■■□□□ 1.89
RPUSD4-207ENST00000532800 UBAP1LF5GYI3 381 aa26.85■■□□□ 1.89
RPUSD4-207ENST00000532800 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
RPUSD4-207ENST00000532800 DEPDC5O75140 1603 aa26.84■■□□□ 1.89
RPUSD4-207ENST00000532800 APLP2Q06481 763 aa26.84■■□□□ 1.89
RPUSD4-207ENST00000532800 ANKLE2Q86XL3 938 aa26.84■■□□□ 1.89
RPUSD4-207ENST00000532800 THEMISQ8N1K5 641 aaPredicted RBP26.84■■□□□ 1.89
RPUSD4-207ENST00000532800 DAPK1P53355 1430 aa26.82■■□□□ 1.88
RPUSD4-207ENST00000532800 PRDM15P57071 1507 aaPredicted RBP26.82■■□□□ 1.88
RPUSD4-207ENST00000532800 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
RPUSD4-207ENST00000532800 VWDEQ8N2E2 1590 aa26.81■■□□□ 1.88
RPUSD4-207ENST00000532800 NPHP4O75161 1426 aaPredicted RBP26.81■■□□□ 1.88
RPUSD4-207ENST00000532800 MED14O60244 1454 aa26.81■■□□□ 1.88
RPUSD4-207ENST00000532800 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
RPUSD4-207ENST00000532800 ERBINQ96RT1 1412 aa26.8■■□□□ 1.88
RPUSD4-207ENST00000532800 CPS1P31327 1500 aa26.8■■□□□ 1.88
RPUSD4-207ENST00000532800 IQGAP1P46940 1657 aa26.79■■□□□ 1.88
RPUSD4-207ENST00000532800 UBR1Q8IWV7 1749 aa26.77■■□□□ 1.88
RPUSD4-207ENST00000532800 ILDR2Q71H61 639 aa26.76■■□□□ 1.87
RPUSD4-207ENST00000532800 ARHGAP31Q2M1Z3 1444 aa26.73■■□□□ 1.87
RPUSD4-207ENST00000532800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.71■■□□□ 1.871e-6■■■□□ 15.3
RPUSD4-207ENST00000532800 CHIC2Q9UKJ5 165 aa26.71■■□□□ 1.87
RPUSD4-207ENST00000532800 STRCP1A6NGW2 1772 aa26.71■■□□□ 1.87
RPUSD4-207ENST00000532800 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
RPUSD4-207ENST00000532800 SCAF1Q9H7N4 1312 aaKnown RBP26.66■■□□□ 1.86
RPUSD4-207ENST00000532800 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
RPUSD4-207ENST00000532800 PIK3C2BO00750 1634 aa26.65■■□□□ 1.86
RPUSD4-207ENST00000532800 PIP4K2BP78356 416 aa26.65■■□□□ 1.86
RPUSD4-207ENST00000532800 ARHGAP23Q9P227 1491 aa26.64■■□□□ 1.86
RPUSD4-207ENST00000532800 KANK1Q14678 1352 aa26.64■■□□□ 1.86
RPUSD4-207ENST00000532800 ALKQ9UM73 1620 aa26.64■■□□□ 1.85
RPUSD4-207ENST00000532800 SLIT1O75093 1534 aa26.64■■□□□ 1.85
RPUSD4-207ENST00000532800 LMTK2Q8IWU2 1503 aa26.63■■□□□ 1.85
RPUSD4-207ENST00000532800 TOM1O60784 492 aa26.62■■□□□ 1.85
RPUSD4-207ENST00000532800 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
RPUSD4-207ENST00000532800 LTKP29376 864 aa26.61■■□□□ 1.85
RPUSD4-207ENST00000532800 SYNMO15061 1565 aa26.6■■□□□ 1.85
RPUSD4-207ENST00000532800 LRRC7Q96NW7 1537 aa26.6■■□□□ 1.85
RPUSD4-207ENST00000532800 HSPA1LP34931 641 aa26.59■■□□□ 1.85
RPUSD4-207ENST00000532800 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
RPUSD4-207ENST00000532800 EFCAB6Q5THR3 1501 aa26.57■■□□□ 1.84
RPUSD4-207ENST00000532800 TXNDC2Q86VQ3 553 aa26.57■■□□□ 1.84
RPUSD4-207ENST00000532800 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
RPUSD4-207ENST00000532800 TMEM2Q9UHN6 1383 aa26.53■■□□□ 1.84
RPUSD4-207ENST00000532800 SOCS7O14512 581 aa26.52■■□□□ 1.84
RPUSD4-207ENST00000532800 NOS1P29475 1434 aa26.52■■□□□ 1.84
RPUSD4-207ENST00000532800 IDI1Q13907 227 aa26.51■■□□□ 1.83
RPUSD4-207ENST00000532800 STAG3Q9UJ98 1225 aa26.51■■□□□ 1.83
RPUSD4-207ENST00000532800 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
RPUSD4-207ENST00000532800 ANKRD50Q9ULJ7 1429 aa26.5■■□□□ 1.83
RPUSD4-207ENST00000532800 MED1Q15648 1581 aaPredicted RBP26.49■■□□□ 1.83
RPUSD4-207ENST00000532800 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
RPUSD4-207ENST00000532800 ADGRB3O60242 1522 aa26.48■■□□□ 1.83
RPUSD4-207ENST00000532800 TET3O43151 1660 aa26.44■■□□□ 1.82
RPUSD4-207ENST00000532800 SENP3Q9H4L4 574 aaPredicted RBP26.42■■□□□ 1.82
RPUSD4-207ENST00000532800 RPRD2Q5VT52 1461 aaKnown RBP26.42■■□□□ 1.82
RPUSD4-207ENST00000532800 UNC13BO14795 1591 aa26.41■■□□□ 1.82
RPUSD4-207ENST00000532800 MYO5BQ9ULV0 1848 aa26.4■■□□□ 1.82
RPUSD4-207ENST00000532800 GCC2Q8IWJ2 1684 aa26.39■■□□□ 1.82
RPUSD4-207ENST00000532800 SLC52A1Q9NWF4 448 aa26.38■■□□□ 1.81
RPUSD4-207ENST00000532800 SLC26A8Q96RN1 970 aa26.37■■□□□ 1.81
RPUSD4-207ENST00000532800 E9PCH4 1651 aa26.34■■□□□ 1.81
RPUSD4-207ENST00000532800 TMEM94Q12767 1356 aa26.33■■□□□ 1.8
RPUSD4-207ENST00000532800 ROCK1Q13464 1354 aa26.33■■□□□ 1.8
RPUSD4-207ENST00000532800 TMEM131LA2VDJ0 1609 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms