RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
CDC27-208ENST00000532575 TMEM121BQ9BXQ6 578 aaPredicted RBP14.32□□□□□ -0.12
CDC27-208ENST00000532575 G3V3G9 751 aa14.31□□□□□ -0.12
CDC27-208ENST00000532575 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
CDC27-208ENST00000532575 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
CDC27-208ENST00000532575 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
CDC27-208ENST00000532575 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
CDC27-208ENST00000532575 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
CDC27-208ENST00000532575 GLI2P10070 1586 aa14.27□□□□□ -0.12
CDC27-208ENST00000532575 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
CDC27-208ENST00000532575 IQGAP2Q13576 1575 aa14.26□□□□□ -0.13
CDC27-208ENST00000532575 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
CDC27-208ENST00000532575 KDM5BQ9UGL1 1544 aa14.21□□□□□ -0.13
CDC27-208ENST00000532575 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
CDC27-208ENST00000532575 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
CDC27-208ENST00000532575 DISP1Q96F81 1524 aa14.2□□□□□ -0.14
CDC27-208ENST00000532575 LHX8Q68G74 356 aa14.2□□□□□ -0.14
CDC27-208ENST00000532575 ADGRL1O94910 1474 aa14.19□□□□□ -0.14
CDC27-208ENST00000532575 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
CDC27-208ENST00000532575 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
CDC27-208ENST00000532575 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
CDC27-208ENST00000532575 TMEM92Q6UXU6 159 aa14.17□□□□□ -0.14
CDC27-208ENST00000532575 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.17□□□□□ -0.14
CDC27-208ENST00000532575 COL17A1Q9UMD9 1497 aaPredicted RBP14.17□□□□□ -0.14
CDC27-208ENST00000532575 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
CDC27-208ENST00000532575 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
CDC27-208ENST00000532575 MAMSTRQ6ZN01 415 aa14.15□□□□□ -0.14
CDC27-208ENST00000532575 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
CDC27-208ENST00000532575 SCUBE2Q9NQ36 999 aa14.14□□□□□ -0.15
CDC27-208ENST00000532575 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
CDC27-208ENST00000532575 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
CDC27-208ENST00000532575 WDR7Q9Y4E6 1490 aa14.12□□□□□ -0.15
CDC27-208ENST00000532575 ZCCHC11Q5TAX3 1644 aaKnown RBP14.12□□□□□ -0.15
CDC27-208ENST00000532575 PDE4AP27815 886 aa14.11□□□□□ -0.15
CDC27-208ENST00000532575 KIAA0556O60303 1618 aa14.11□□□□□ -0.15
CDC27-208ENST00000532575 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 C2orf72A6NCS6 295 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 KIF3CO14782 793 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 KCNH8Q96L42 1107 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
CDC27-208ENST00000532575 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
CDC27-208ENST00000532575 GPHNQ9NQX3 736 aaPredicted RBP14.09□□□□□ -0.15
CDC27-208ENST00000532575 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
CDC27-208ENST00000532575 MAGI3Q5TCQ9 1506 aa14.08□□□□□ -0.16
CDC27-208ENST00000532575 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CDC27-208ENST00000532575 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
CDC27-208ENST00000532575 MFSD10Q14728 455 aa14.05□□□□□ -0.16
CDC27-208ENST00000532575 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
CDC27-208ENST00000532575 DSG2Q14126 1118 aa14.02□□□□□ -0.17
CDC27-208ENST00000532575 DDX27Q96GQ7 796 aaKnown RBP14.02□□□□□ -0.17
CDC27-208ENST00000532575 ABCA8O94911 1581 aa14.01□□□□□ -0.17
CDC27-208ENST00000532575 FOXK1P85037 733 aa14.01□□□□□ -0.17
CDC27-208ENST00000532575 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
CDC27-208ENST00000532575 PHLDB1Q86UU1 1377 aa14□□□□□ -0.17
CDC27-208ENST00000532575 PPP1R15BQ5SWA1 713 aa14□□□□□ -0.17
CDC27-208ENST00000532575 WDR70Q9NW82 654 aa13.99□□□□□ -0.17
CDC27-208ENST00000532575 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
CDC27-208ENST00000532575 PLPP6Q8IY26 295 aa13.97□□□□□ -0.17
CDC27-208ENST00000532575 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
CDC27-208ENST00000532575 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
CDC27-208ENST00000532575 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
CDC27-208ENST00000532575 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
CDC27-208ENST00000532575 ATP10BO94823 1461 aa13.93□□□□□ -0.18
CDC27-208ENST00000532575 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
CDC27-208ENST00000532575 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
CDC27-208ENST00000532575 E2F4Q16254 413 aa13.89□□□□□ -0.19
CDC27-208ENST00000532575 KIF21BO75037 1637 aa13.89□□□□□ -0.19
CDC27-208ENST00000532575 NEO1Q92859 1461 aa13.88□□□□□ -0.19
CDC27-208ENST00000532575 CAMK2BQ13554 666 aa13.88□□□□□ -0.19
CDC27-208ENST00000532575 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
CDC27-208ENST00000532575 PTPRMP28827 1452 aa13.87□□□□□ -0.19
CDC27-208ENST00000532575 ABCA9Q8IUA7 1624 aa13.87□□□□□ -0.19
CDC27-208ENST00000532575 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
CDC27-208ENST00000532575 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
CDC27-208ENST00000532575 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
CDC27-208ENST00000532575 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
CDC27-208ENST00000532575 ADAMTSL3P82987 1691 aa13.82□□□□□ -0.2
CDC27-208ENST00000532575 SLC34A2O95436 690 aa13.81□□□□□ -0.2
CDC27-208ENST00000532575 RAPGEF6Q8TEU7 1601 aa13.81□□□□□ -0.2
CDC27-208ENST00000532575 SNPHO15079 494 aa13.8□□□□□ -0.2
CDC27-208ENST00000532575 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
CDC27-208ENST00000532575 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
CDC27-208ENST00000532575 SAMD9Q5K651 1589 aa13.79□□□□□ -0.2
CDC27-208ENST00000532575 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
CDC27-208ENST00000532575 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDC27-208ENST00000532575 POGZQ7Z3K3 1410 aa13.78□□□□□ -0.2
CDC27-208ENST00000532575 NUP153P49790 1475 aaKnown RBP13.78□□□□□ -0.2
CDC27-208ENST00000532575 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
CDC27-208ENST00000532575 RANGAP1P46060 587 aaPredicted RBP13.77□□□□□ -0.21
CDC27-208ENST00000532575 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
CDC27-208ENST00000532575 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
CDC27-208ENST00000532575 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
CDC27-208ENST00000532575 EEA1Q15075 1411 aa13.76□□□□□ -0.21
CDC27-208ENST00000532575 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
CDC27-208ENST00000532575 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
CDC27-208ENST00000532575 FANCAO15360 1455 aa13.74□□□□□ -0.21
CDC27-208ENST00000532575 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
CDC27-208ENST00000532575 DPYSL4O14531 572 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms