RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
GEN1-205ENST00000532257 INO80Q9ULG1 1556 aaPredicted RBP17.15■□□□□ 0.34
GEN1-205ENST00000532257 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
GEN1-205ENST00000532257 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
GEN1-205ENST00000532257 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
GEN1-205ENST00000532257 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
GEN1-205ENST00000532257 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
GEN1-205ENST00000532257 ROBO1Q9Y6N7 1651 aa17.12■□□□□ 0.33
GEN1-205ENST00000532257 ZC3H13Q5T200 1668 aaKnown RBP17.11■□□□□ 0.33
GEN1-205ENST00000532257 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
GEN1-205ENST00000532257 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
GEN1-205ENST00000532257 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
GEN1-205ENST00000532257 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
GEN1-205ENST00000532257 THEMISQ8N1K5 641 aaPredicted RBP17.09■□□□□ 0.33
GEN1-205ENST00000532257 PZPP20742 1482 aa17.09■□□□□ 0.33
GEN1-205ENST00000532257 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
GEN1-205ENST00000532257 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
GEN1-205ENST00000532257 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
GEN1-205ENST00000532257 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
GEN1-205ENST00000532257 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
GEN1-205ENST00000532257 PHLPP1O60346 1717 aa17.03■□□□□ 0.32
GEN1-205ENST00000532257 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
GEN1-205ENST00000532257 MIA2Q96PC5 1412 aa17.02■□□□□ 0.31
GEN1-205ENST00000532257 LRP6O75581 1613 aa17.01■□□□□ 0.31
GEN1-205ENST00000532257 JCADQ9P266 1359 aa17■□□□□ 0.31
GEN1-205ENST00000532257 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
GEN1-205ENST00000532257 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
GEN1-205ENST00000532257 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
GEN1-205ENST00000532257 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
GEN1-205ENST00000532257 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
GEN1-205ENST00000532257 KIAA1107Q9UPP5 1409 aa16.95■□□□□ 0.3
GEN1-205ENST00000532257 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
GEN1-205ENST00000532257 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
GEN1-205ENST00000532257 COL16A1Q07092 1604 aaPredicted RBP16.94■□□□□ 0.3
GEN1-205ENST00000532257 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
GEN1-205ENST00000532257 RXRBP28702 533 aa16.93■□□□□ 0.3
GEN1-205ENST00000532257 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
GEN1-205ENST00000532257 PLEKHH2Q8IVE3 1493 aa16.93■□□□□ 0.3
GEN1-205ENST00000532257 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
GEN1-205ENST00000532257 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
GEN1-205ENST00000532257 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
GEN1-205ENST00000532257 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
GEN1-205ENST00000532257 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.3
GEN1-205ENST00000532257 KIF3BO15066 747 aa16.88■□□□□ 0.29
GEN1-205ENST00000532257 SPATA31A6Q5VVP1 1343 aa16.88■□□□□ 0.29
GEN1-205ENST00000532257 RGS12O14924 1447 aa16.87■□□□□ 0.29
GEN1-205ENST00000532257 EEA1Q15075 1411 aa16.87■□□□□ 0.29
GEN1-205ENST00000532257 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
GEN1-205ENST00000532257 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
GEN1-205ENST00000532257 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
GEN1-205ENST00000532257 RBM33Q96EV2 1170 aaKnown RBP16.85■□□□□ 0.29
GEN1-205ENST00000532257 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
GEN1-205ENST00000532257 SLIT1O75093 1534 aa16.85■□□□□ 0.29
GEN1-205ENST00000532257 LTKP29376 864 aa16.84■□□□□ 0.29
GEN1-205ENST00000532257 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
GEN1-205ENST00000532257 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
GEN1-205ENST00000532257 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
GEN1-205ENST00000532257 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
GEN1-205ENST00000532257 RTEL1-TNFRSF6BF6WH68 1400 aa16.82■□□□□ 0.28
GEN1-205ENST00000532257 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
GEN1-205ENST00000532257 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
GEN1-205ENST00000532257 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
GEN1-205ENST00000532257 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
GEN1-205ENST00000532257 EP400Q96L91 3159 aa16.79■□□□□ 0.28
GEN1-205ENST00000532257 MSH6P52701 1360 aa16.79■□□□□ 0.28
GEN1-205ENST00000532257 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
GEN1-205ENST00000532257 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
GEN1-205ENST00000532257 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
GEN1-205ENST00000532257 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
GEN1-205ENST00000532257 ABCC3O15438 1527 aa16.79■□□□□ 0.28
GEN1-205ENST00000532257 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
GEN1-205ENST00000532257 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
GEN1-205ENST00000532257 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
GEN1-205ENST00000532257 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
GEN1-205ENST00000532257 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
GEN1-205ENST00000532257 AFF2P51816 1311 aa16.77■□□□□ 0.28
GEN1-205ENST00000532257 KCNA6P17658 529 aa16.77■□□□□ 0.28
GEN1-205ENST00000532257 KDM5AP29375 1690 aaKnown RBP16.77■□□□□ 0.28
GEN1-205ENST00000532257 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
GEN1-205ENST00000532257 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
GEN1-205ENST00000532257 ZNF644Q9H582 1327 aaPredicted RBP16.75■□□□□ 0.27
GEN1-205ENST00000532257 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
GEN1-205ENST00000532257 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
GEN1-205ENST00000532257 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
GEN1-205ENST00000532257 CEP152O94986 1710 aa16.73■□□□□ 0.27
GEN1-205ENST00000532257 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
GEN1-205ENST00000532257 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
GEN1-205ENST00000532257 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
GEN1-205ENST00000532257 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
GEN1-205ENST00000532257 LRP5O75197 1615 aa16.7■□□□□ 0.26
GEN1-205ENST00000532257 TET3O43151 1660 aa16.7■□□□□ 0.26
GEN1-205ENST00000532257 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
GEN1-205ENST00000532257 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
GEN1-205ENST00000532257 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
GEN1-205ENST00000532257 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
GEN1-205ENST00000532257 TMEM2Q9UHN6 1383 aa16.68■□□□□ 0.26
GEN1-205ENST00000532257 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
GEN1-205ENST00000532257 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
GEN1-205ENST00000532257 C8orf37Q96NL8 207 aa16.64■□□□□ 0.25
GEN1-205ENST00000532257 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms