RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 KDM5DQ9BY66 1539 aa28.89■■■□□ 2.22
PSMC3-208ENST00000530887 KIF3BO15066 747 aa28.89■■■□□ 2.22
PSMC3-208ENST00000530887 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PSMC3-208ENST00000530887 NCKAP5LQ9HCH0 1330 aa28.86■■■□□ 2.21
PSMC3-208ENST00000530887 PZPP20742 1482 aa28.85■■■□□ 2.21
PSMC3-208ENST00000530887 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
PSMC3-208ENST00000530887 LRRC9Q6ZRR7 1453 aa28.85■■■□□ 2.21
PSMC3-208ENST00000530887 TNRQ92752 1358 aa28.83■■■□□ 2.21
PSMC3-208ENST00000530887 MIA2Q96PC5 1412 aa28.8■■■□□ 2.2
PSMC3-208ENST00000530887 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
PSMC3-208ENST00000530887 MAST1Q9Y2H9 1570 aa28.78■■■□□ 2.2
PSMC3-208ENST00000530887 NLRP1Q9C000 1473 aa28.78■■■□□ 2.2
PSMC3-208ENST00000530887 ZNF335Q9H4Z2 1342 aaPredicted RBP28.75■■■□□ 2.19
PSMC3-208ENST00000530887 THEMISQ8N1K5 641 aaPredicted RBP28.75■■■□□ 2.19
PSMC3-208ENST00000530887 DISP3Q9P2K9 1392 aa28.73■■■□□ 2.19
PSMC3-208ENST00000530887 ZC3H13Q5T200 1668 aaKnown RBP28.72■■■□□ 2.19
PSMC3-208ENST00000530887 EIF2AK4Q9P2K8 1649 aaKnown RBP28.72■■■□□ 2.19
PSMC3-208ENST00000530887 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
PSMC3-208ENST00000530887 ANKLE2Q86XL3 938 aa28.71■■■□□ 2.19
PSMC3-208ENST00000530887 RNF17Q9BXT8 1623 aaKnown RBP28.71■■■□□ 2.19
PSMC3-208ENST00000530887 POLR1AO95602 1720 aaPredicted RBP28.7■■■□□ 2.19
PSMC3-208ENST00000530887 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
PSMC3-208ENST00000530887 CPS1P31327 1500 aa28.68■■■□□ 2.18
PSMC3-208ENST00000530887 UBAP1LF5GYI3 381 aa28.67■■■□□ 2.18
PSMC3-208ENST00000530887 APLP2Q06481 763 aa28.66■■■□□ 2.18
PSMC3-208ENST00000530887 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
PSMC3-208ENST00000530887 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
PSMC3-208ENST00000530887 DEPDC5O75140 1603 aa28.62■■■□□ 2.17
PSMC3-208ENST00000530887 LOC105371045A0A1W2PR82 267 aa28.62■■■□□ 2.17
PSMC3-208ENST00000530887 ABCC3O15438 1527 aa28.62■■■□□ 2.17
PSMC3-208ENST00000530887 MED14O60244 1454 aa28.61■■■□□ 2.17
PSMC3-208ENST00000530887 SPATA31D1Q6ZQQ2 1576 aa28.61■■■□□ 2.17
PSMC3-208ENST00000530887 NEURL4Q96JN8 1562 aa28.6■■■□□ 2.17
PSMC3-208ENST00000530887 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
PSMC3-208ENST00000530887 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
PSMC3-208ENST00000530887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.59■■■□□ 2.17
PSMC3-208ENST00000530887 TOM1O60784 492 aa28.58■■■□□ 2.17
PSMC3-208ENST00000530887 NPHP4O75161 1426 aaPredicted RBP28.56■■■□□ 2.16
PSMC3-208ENST00000530887 ERBINQ96RT1 1412 aa28.55■■■□□ 2.16
PSMC3-208ENST00000530887 ERVK-7P63135 1459 aa28.54■■■□□ 2.16
PSMC3-208ENST00000530887 ARHGAP31Q2M1Z3 1444 aa28.52■■■□□ 2.16
PSMC3-208ENST00000530887 KIF15Q9NS87 1388 aa28.51■■■□□ 2.16
PSMC3-208ENST00000530887 MROH1Q8NDA8 1641 aa28.5■■■□□ 2.15
PSMC3-208ENST00000530887 SOCS7O14512 581 aa28.49■■■□□ 2.15
PSMC3-208ENST00000530887 PRDM15P57071 1507 aaPredicted RBP28.48■■■□□ 2.15
PSMC3-208ENST00000530887 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
PSMC3-208ENST00000530887 PTPN23Q9H3S7 1636 aa28.47■■■□□ 2.15
PSMC3-208ENST00000530887 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
PSMC3-208ENST00000530887 KANK1Q14678 1352 aa28.47■■■□□ 2.15
PSMC3-208ENST00000530887 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
PSMC3-208ENST00000530887 ABCC5O15440 1437 aa28.46■■■□□ 2.15
PSMC3-208ENST00000530887 CEP152O94986 1710 aa28.43■■■□□ 2.14
PSMC3-208ENST00000530887 ILDR2Q71H61 639 aa28.43■■■□□ 2.14
PSMC3-208ENST00000530887 DAPK1P53355 1430 aa28.43■■■□□ 2.14
PSMC3-208ENST00000530887 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
PSMC3-208ENST00000530887 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
PSMC3-208ENST00000530887 SCAF11Q99590 1463 aaKnown RBP28.4■■■□□ 2.14
PSMC3-208ENST00000530887 SYNMO15061 1565 aa28.39■■■□□ 2.14
PSMC3-208ENST00000530887 UBR1Q8IWV7 1749 aa28.39■■■□□ 2.14
PSMC3-208ENST00000530887 RRP7BPQ9NSQ0 103 aa28.39■■■□□ 2.14
PSMC3-208ENST00000530887 SCAF1Q9H7N4 1312 aaKnown RBP28.39■■■□□ 2.13
PSMC3-208ENST00000530887 EID1Q9Y6B2 187 aa28.38■■■□□ 2.13
PSMC3-208ENST00000530887 SLIT1O75093 1534 aa28.38■■■□□ 2.13
PSMC3-208ENST00000530887 ARHGAP23Q9P227 1491 aa28.35■■■□□ 2.13
PSMC3-208ENST00000530887 PIP4K2BP78356 416 aa28.35■■■□□ 2.13
PSMC3-208ENST00000530887 CFAP65Q6ZU64 1925 aaKnown RBP28.35■■■□□ 2.13
PSMC3-208ENST00000530887 LMTK2Q8IWU2 1503 aa28.34■■■□□ 2.13
PSMC3-208ENST00000530887 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
PSMC3-208ENST00000530887 HSPA1LP34931 641 aa28.31■■■□□ 2.12
PSMC3-208ENST00000530887 TXNDC2Q86VQ3 553 aa28.31■■■□□ 2.12
PSMC3-208ENST00000530887 STAG3Q9UJ98 1225 aa28.31■■■□□ 2.12
PSMC3-208ENST00000530887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.129e-7■■■■□ 21.5
PSMC3-208ENST00000530887 LRRC7Q96NW7 1537 aa28.29■■■□□ 2.12
PSMC3-208ENST00000530887 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
PSMC3-208ENST00000530887 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.12
PSMC3-208ENST00000530887 LTKP29376 864 aa28.23■■■□□ 2.11
PSMC3-208ENST00000530887 SLC52A1Q9NWF4 448 aa28.23■■■□□ 2.11
PSMC3-208ENST00000530887 EFCAB6Q5THR3 1501 aa28.23■■■□□ 2.11
PSMC3-208ENST00000530887 CHIC2Q9UKJ5 165 aa28.22■■■□□ 2.11
PSMC3-208ENST00000530887 PIK3C2BO00750 1634 aa28.21■■■□□ 2.11
PSMC3-208ENST00000530887 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
PSMC3-208ENST00000530887 STRCP1A6NGW2 1772 aa28.2■■■□□ 2.11
PSMC3-208ENST00000530887 MED1Q15648 1581 aaPredicted RBP28.19■■■□□ 2.1
PSMC3-208ENST00000530887 NOS1P29475 1434 aa28.18■■■□□ 2.1
PSMC3-208ENST00000530887 IDI1Q13907 227 aa28.17■■■□□ 2.1
PSMC3-208ENST00000530887 ALKQ9UM73 1620 aa28.17■■■□□ 2.1
PSMC3-208ENST00000530887 ANKRD50Q9ULJ7 1429 aa28.16■■■□□ 2.1
PSMC3-208ENST00000530887 HDGFP51858 240 aaKnown RBP28.15■■■□□ 2.1
PSMC3-208ENST00000530887 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.1
PSMC3-208ENST00000530887 ADGRB3O60242 1522 aa28.13■■■□□ 2.09
PSMC3-208ENST00000530887 KCNA6P17658 529 aa28.11■■■□□ 2.09
PSMC3-208ENST00000530887 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
PSMC3-208ENST00000530887 TET3O43151 1660 aa28.06■■■□□ 2.08
PSMC3-208ENST00000530887 NKTRP30414 1462 aaKnown RBP28.05■■■□□ 2.08
PSMC3-208ENST00000530887 FAM135BQ49AJ0 1406 aa28.05■■■□□ 2.08
PSMC3-208ENST00000530887 ROCK1Q13464 1354 aa28.04■■■□□ 2.08
PSMC3-208ENST00000530887 TMEM94Q12767 1356 aa28.01■■■□□ 2.07
PSMC3-208ENST00000530887 XIRP1Q702N8 1843 aaKnown RBP28■■■□□ 2.07
PSMC3-208ENST00000530887 ABCF1Q8NE71 845 aaKnown RBP eCLIP28■■■□□ 2.07
PSMC3-208ENST00000530887 GCC2Q8IWJ2 1684 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms