RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
CTNND1-226ENST00000530720 CTTNBP2Q8WZ74 1663 aa7.92□□□□□ -1.14
CTNND1-226ENST00000530720 TTBK1Q5TCY1 1321 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-226ENST00000530720 RIOK3O14730 519 aaKnown RBP7.9□□□□□ -1.14
CTNND1-226ENST00000530720 RNF25Q96BH1 459 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-226ENST00000530720 EMP3P54852 163 aa7.89□□□□□ -1.15
CTNND1-226ENST00000530720 ABCA8O94911 1581 aa7.88□□□□□ -1.15
CTNND1-226ENST00000530720 PRXQ9BXM0 1461 aa7.88□□□□□ -1.15
CTNND1-226ENST00000530720 ADGRL1O94910 1474 aa7.87□□□□□ -1.15
CTNND1-226ENST00000530720 WDR7Q9Y4E6 1490 aa7.87□□□□□ -1.15
CTNND1-226ENST00000530720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-226ENST00000530720 VGFO15240 615 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-226ENST00000530720 ZFP91Q96JP5 570 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-226ENST00000530720 SOX12O15370 315 aa7.86□□□□□ -1.15
CTNND1-226ENST00000530720 HOXB3P14651 431 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-226ENST00000530720 SPNS2Q8IVW8 549 aa7.85□□□□□ -1.15
CTNND1-226ENST00000530720 TEX14Q8IWB6 1497 aa7.85□□□□□ -1.15
CTNND1-226ENST00000530720 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
CTNND1-226ENST00000530720 POTEB3A0JP26 581 aa7.84□□□□□ -1.15
CTNND1-226ENST00000530720 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
CTNND1-226ENST00000530720 POTEBQ6S5H4 581 aa7.84□□□□□ -1.15
CTNND1-226ENST00000530720 HS3ST6Q96QI5 342 aa7.84□□□□□ -1.15
CTNND1-226ENST00000530720 MAGI3Q5TCQ9 1506 aa7.83□□□□□ -1.16
CTNND1-226ENST00000530720 MMRN1Q13201 1228 aa7.83□□□□□ -1.16
CTNND1-226ENST00000530720 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
CTNND1-226ENST00000530720 GOLGA3Q08378 1498 aa7.82□□□□□ -1.16
CTNND1-226ENST00000530720 DOK7Q18PE1 504 aa7.82□□□□□ -1.16
CTNND1-226ENST00000530720 SAMD9Q5K651 1589 aa7.82□□□□□ -1.16
CTNND1-226ENST00000530720 MS4A4AQ96JQ5 239 aa7.82□□□□□ -1.16
CTNND1-226ENST00000530720 PHF8Q9UPP1 1060 aa7.82□□□□□ -1.16
CTNND1-226ENST00000530720 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
CTNND1-226ENST00000530720 HOXB1P14653 301 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-226ENST00000530720 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
CTNND1-226ENST00000530720 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
CTNND1-226ENST00000530720 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
CTNND1-226ENST00000530720 ATP10BO94823 1461 aa7.8□□□□□ -1.16
CTNND1-226ENST00000530720 HECW2Q9P2P5 1572 aa7.8□□□□□ -1.16
CTNND1-226ENST00000530720 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
CTNND1-226ENST00000530720 KIF21BO75037 1637 aa7.79□□□□□ -1.16
CTNND1-226ENST00000530720 ABCA9Q8IUA7 1624 aa7.79□□□□□ -1.16
CTNND1-226ENST00000530720 TAOK2Q9UL54 1235 aa7.79□□□□□ -1.16
CTNND1-226ENST00000530720 ARAP3Q8WWN8 1544 aa7.78□□□□□ -1.16
CTNND1-226ENST00000530720 FRMPD1Q5SYB0 1578 aa7.77□□□□□ -1.17
CTNND1-226ENST00000530720 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
CTNND1-226ENST00000530720 BCL11BQ9C0K0 894 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-226ENST00000530720 RAPGEF6Q8TEU7 1601 aa7.77□□□□□ -1.17
CTNND1-226ENST00000530720 NUP153P49790 1475 aaKnown RBP7.76□□□□□ -1.17
CTNND1-226ENST00000530720 NLRP6P59044 892 aa7.76□□□□□ -1.17
CTNND1-226ENST00000530720 FBXO22Q8NEZ5 403 aa7.75□□□□□ -1.17
CTNND1-226ENST00000530720 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
CTNND1-226ENST00000530720 ERBB3P21860 1342 aa7.75□□□□□ -1.17
CTNND1-226ENST00000530720 ADAMTSL3P82987 1691 aa7.74□□□□□ -1.17
CTNND1-226ENST00000530720 ZSWIM6Q9HCJ5 1215 aa7.74□□□□□ -1.17
CTNND1-226ENST00000530720 STK24Q9Y6E0 443 aa7.74□□□□□ -1.17
CTNND1-226ENST00000530720 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
CTNND1-226ENST00000530720 ECM2O94769 699 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-226ENST00000530720 P3H3Q8IVL6 736 aa7.73□□□□□ -1.17
CTNND1-226ENST00000530720 NEO1Q92859 1461 aa7.72□□□□□ -1.17
CTNND1-226ENST00000530720 SIGLEC1Q9BZZ2 1709 aa7.72□□□□□ -1.17
CTNND1-226ENST00000530720 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.17
CTNND1-226ENST00000530720 STK25O00506 426 aa7.71□□□□□ -1.18
CTNND1-226ENST00000530720 GPR153Q6NV75 609 aa7.71□□□□□ -1.18
CTNND1-226ENST00000530720 MFRPQ9BY79 579 aa7.71□□□□□ -1.18
CTNND1-226ENST00000530720 RICTORQ6R327 1708 aa7.71□□□□□ -1.18
CTNND1-226ENST00000530720 BCORL1Q5H9F3 1711 aa7.7□□□□□ -1.18
CTNND1-226ENST00000530720 PKD2Q13563 968 aa7.7□□□□□ -1.18
CTNND1-226ENST00000530720 TTC37Q6PGP7 1564 aa7.7□□□□□ -1.18
CTNND1-226ENST00000530720 PHLDB1Q86UU1 1377 aa7.7□□□□□ -1.18
CTNND1-226ENST00000530720 EEA1Q15075 1411 aa7.69□□□□□ -1.18
CTNND1-226ENST00000530720 PTPRMP28827 1452 aa7.69□□□□□ -1.18
CTNND1-226ENST00000530720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.69□□□□□ -1.18
CTNND1-226ENST00000530720 ARHGEF40Q8TER5 1519 aa7.69□□□□□ -1.18
CTNND1-226ENST00000530720 RAPGEF3O95398 923 aa7.69□□□□□ -1.18
CTNND1-226ENST00000530720 VARS2Q5ST30 1063 aaKnown RBP7.69□□□□□ -1.18
CTNND1-226ENST00000530720 MADDQ8WXG6 1647 aa7.69□□□□□ -1.18
CTNND1-226ENST00000530720 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
CTNND1-226ENST00000530720 RGL2O15211 777 aa7.68□□□□□ -1.18
CTNND1-226ENST00000530720 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
CTNND1-226ENST00000530720 CDK13Q14004 1512 aaKnown RBP7.67□□□□□ -1.18
CTNND1-226ENST00000530720 ARSIQ5FYB1 569 aa7.66□□□□□ -1.18
CTNND1-226ENST00000530720 ZNF687Q8N1G0 1237 aa7.66□□□□□ -1.18
CTNND1-226ENST00000530720 LMTK3Q96Q04 1460 aa7.66□□□□□ -1.18
CTNND1-226ENST00000530720 KIF3CO14782 793 aa7.65□□□□□ -1.18
CTNND1-226ENST00000530720 FANCAO15360 1455 aa7.65□□□□□ -1.18
CTNND1-226ENST00000530720 PCF11O94913 1555 aaKnown RBP7.65□□□□□ -1.18
CTNND1-226ENST00000530720 CFAP74Q9C0B2 1584 aa7.65□□□□□ -1.18
CTNND1-226ENST00000530720 LRRIQ1Q96JM4 1722 aa7.64□□□□□ -1.19
CTNND1-226ENST00000530720 RIMS1Q86UR5 1692 aaKnown RBP7.64□□□□□ -1.19
CTNND1-226ENST00000530720 DENND4BO75064 1496 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-226ENST00000530720 AKNAQ7Z591 1439 aa7.64□□□□□ -1.19
CTNND1-226ENST00000530720 YEATS2Q9ULM3 1422 aa7.64□□□□□ -1.19
CTNND1-226ENST00000530720 HECW1Q76N89 1606 aa7.63□□□□□ -1.19
CTNND1-226ENST00000530720 ARHGAP35Q9NRY4 1499 aa7.63□□□□□ -1.19
CTNND1-226ENST00000530720 C2orf72A6NCS6 295 aa7.63□□□□□ -1.19
CTNND1-226ENST00000530720 RANGAP1P46060 587 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-226ENST00000530720 KIF14Q15058 1648 aa7.63□□□□□ -1.19
CTNND1-226ENST00000530720 ZFYVE16Q7Z3T8 1539 aa7.62□□□□□ -1.19
CTNND1-226ENST00000530720 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTNND1-226ENST00000530720 POGZQ7Z3K3 1410 aa7.61□□□□□ -1.19
CTNND1-226ENST00000530720 PLEKHD1A6NEE1 506 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms