RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 RSPH4AQ5TD94 716 aa32.95■■■□□ 2.87
TSPAN4-219ENST00000530404 A2ML1A8K2U0 1454 aa32.94■■■□□ 2.86
TSPAN4-219ENST00000530404 KANK4Q5T7N3 995 aaPredicted RBP32.94■■■□□ 2.86
TSPAN4-219ENST00000530404 FBXO31Q5XUX0 539 aaPredicted RBP32.92■■■□□ 2.86
TSPAN4-219ENST00000530404 CFAP65Q6ZU64 1925 aaKnown RBP32.91■■■□□ 2.86
TSPAN4-219ENST00000530404 ZNF335Q9H4Z2 1342 aaPredicted RBP32.91■■■□□ 2.86
TSPAN4-219ENST00000530404 MAST1Q9Y2H9 1570 aa32.91■■■□□ 2.86
TSPAN4-219ENST00000530404 TSPY4P0CV99 314 aa32.9■■■□□ 2.86
TSPAN4-219ENST00000530404 TSPY10P0CW01 314 aa32.9■■■□□ 2.86
TSPAN4-219ENST00000530404 PZPP20742 1482 aa32.9■■■□□ 2.86
TSPAN4-219ENST00000530404 FAM135AQ9P2D6 1515 aa32.9■■■□□ 2.86
TSPAN4-219ENST00000530404 PKD2Q13563 968 aa32.89■■■□□ 2.86
TSPAN4-219ENST00000530404 MAP3K1Q13233 1512 aa32.88■■■□□ 2.85
TSPAN4-219ENST00000530404 IQSEC2Q5JU85 1478 aa32.88■■■□□ 2.85
TSPAN4-219ENST00000530404 RNF17Q9BXT8 1623 aaKnown RBP32.88■■■□□ 2.85
TSPAN4-219ENST00000530404 TNRQ92752 1358 aa32.87■■■□□ 2.85
TSPAN4-219ENST00000530404 WASHC2CQ9Y4E1 1318 aa32.87■■■□□ 2.85
TSPAN4-219ENST00000530404 CEP152O94986 1710 aa32.85■■■□□ 2.85
TSPAN4-219ENST00000530404 MYOM3Q5VTT5 1437 aa32.83■■■□□ 2.85
TSPAN4-219ENST00000530404 EIF2AK4Q9P2K8 1649 aaKnown RBP32.82■■■□□ 2.84
TSPAN4-219ENST00000530404 NEURL4Q96JN8 1562 aa32.82■■■□□ 2.84
TSPAN4-219ENST00000530404 ZC3H13Q5T200 1668 aaKnown RBP32.82■■■□□ 2.84
TSPAN4-219ENST00000530404 CROCC2H7BZ55 1655 aa32.8■■■□□ 2.84
TSPAN4-219ENST00000530404 MIA2Q96PC5 1412 aa32.77■■■□□ 2.84
TSPAN4-219ENST00000530404 ABCC3O15438 1527 aa32.77■■■□□ 2.84
TSPAN4-219ENST00000530404 MROH1Q8NDA8 1641 aa32.77■■■□□ 2.84
TSPAN4-219ENST00000530404 PTPN23Q9H3S7 1636 aa32.73■■■□□ 2.83
TSPAN4-219ENST00000530404 UGGT1Q9NYU2 1555 aa32.73■■■□□ 2.83
TSPAN4-219ENST00000530404 DISP3Q9P2K9 1392 aa32.72■■■□□ 2.83
TSPAN4-219ENST00000530404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.71■■■□□ 2.831e-6■■■■■ 46.2
TSPAN4-219ENST00000530404 NLRP1Q9C000 1473 aa32.7■■■□□ 2.83
TSPAN4-219ENST00000530404 SPATA31D1Q6ZQQ2 1576 aa32.69■■■□□ 2.82
TSPAN4-219ENST00000530404 DUOX2Q9NRD8 1548 aa32.68■■■□□ 2.82
TSPAN4-219ENST00000530404 UBAP1LF5GYI3 381 aa32.68■■■□□ 2.82
TSPAN4-219ENST00000530404 DEPDC5O75140 1603 aa32.65■■■□□ 2.82
TSPAN4-219ENST00000530404 ERVK-7P63135 1459 aa32.64■■■□□ 2.82
TSPAN4-219ENST00000530404 IQGAP1P46940 1657 aa32.63■■■□□ 2.81
TSPAN4-219ENST00000530404 ANKLE2Q86XL3 938 aa32.62■■■□□ 2.81
TSPAN4-219ENST00000530404 THEMISQ8N1K5 641 aaPredicted RBP32.62■■■□□ 2.81
TSPAN4-219ENST00000530404 ABCC5O15440 1437 aa32.61■■■□□ 2.81
TSPAN4-219ENST00000530404 UBR1Q8IWV7 1749 aa32.61■■■□□ 2.81
TSPAN4-219ENST00000530404 APLP2Q06481 763 aa32.61■■■□□ 2.81
TSPAN4-219ENST00000530404 VWDEQ8N2E2 1590 aa32.61■■■□□ 2.81
TSPAN4-219ENST00000530404 SHANK2Q9UPX8 1470 aa32.6■■■□□ 2.81
TSPAN4-219ENST00000530404 KIF15Q9NS87 1388 aa32.59■■■□□ 2.81
TSPAN4-219ENST00000530404 ILDR2Q71H61 639 aa32.59■■■□□ 2.81
TSPAN4-219ENST00000530404 STRCP1A6NGW2 1772 aa32.58■■■□□ 2.81
TSPAN4-219ENST00000530404 CPS1P31327 1500 aa32.58■■■□□ 2.81
TSPAN4-219ENST00000530404 PRDM15P57071 1507 aaPredicted RBP32.57■■■□□ 2.8
TSPAN4-219ENST00000530404 NPHP4O75161 1426 aaPredicted RBP32.57■■■□□ 2.8
TSPAN4-219ENST00000530404 RRP7BPQ9NSQ0 103 aa32.56■■■□□ 2.8
TSPAN4-219ENST00000530404 DAPK1P53355 1430 aa32.56■■■□□ 2.8
TSPAN4-219ENST00000530404 MED14O60244 1454 aa32.55■■■□□ 2.8
TSPAN4-219ENST00000530404 FGD6Q6ZV73 1430 aa32.53■■■□□ 2.8
TSPAN4-219ENST00000530404 ERBINQ96RT1 1412 aa32.52■■■□□ 2.8
TSPAN4-219ENST00000530404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.48■■■□□ 2.79
TSPAN4-219ENST00000530404 SCAF1Q9H7N4 1312 aaKnown RBP32.48■■■□□ 2.79
TSPAN4-219ENST00000530404 CHIC2Q9UKJ5 165 aa32.46■■■□□ 2.79
TSPAN4-219ENST00000530404 PIK3C2BO00750 1634 aa32.45■■■□□ 2.79
TSPAN4-219ENST00000530404 PIP4K2BP78356 416 aa32.45■■■□□ 2.79
TSPAN4-219ENST00000530404 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
TSPAN4-219ENST00000530404 ALKQ9UM73 1620 aa32.4■■■□□ 2.78
TSPAN4-219ENST00000530404 SCAF11Q99590 1463 aaKnown RBP32.38■■■□□ 2.77
TSPAN4-219ENST00000530404 TOM1O60784 492 aa32.38■■■□□ 2.77
TSPAN4-219ENST00000530404 ANKRD30AQ9BXX3 1397 aa32.37■■■□□ 2.77
TSPAN4-219ENST00000530404 SYNMO15061 1565 aa32.36■■■□□ 2.77
TSPAN4-219ENST00000530404 SLIT1O75093 1534 aa32.36■■■□□ 2.77
TSPAN4-219ENST00000530404 KANK1Q14678 1352 aa32.35■■■□□ 2.77
TSPAN4-219ENST00000530404 HSPA1LP34931 641 aa32.35■■■□□ 2.77
TSPAN4-219ENST00000530404 XIRP1Q702N8 1843 aaKnown RBP32.35■■■□□ 2.77
TSPAN4-219ENST00000530404 ARHGAP23Q9P227 1491 aa32.35■■■□□ 2.77
TSPAN4-219ENST00000530404 LRRC7Q96NW7 1537 aa32.34■■■□□ 2.77
TSPAN4-219ENST00000530404 LTKP29376 864 aa32.33■■■□□ 2.77
TSPAN4-219ENST00000530404 LMTK2Q8IWU2 1503 aa32.31■■■□□ 2.76
TSPAN4-219ENST00000530404 SOCS7O14512 581 aa32.29■■■□□ 2.76
TSPAN4-219ENST00000530404 TXNDC2Q86VQ3 553 aa32.29■■■□□ 2.76
TSPAN4-219ENST00000530404 KDM5AP29375 1690 aaKnown RBP32.29■■■□□ 2.76
TSPAN4-219ENST00000530404 ADGRL2O95490 1459 aa32.29■■■□□ 2.76
TSPAN4-219ENST00000530404 MYO5BQ9ULV0 1848 aa32.28■■■□□ 2.76
TSPAN4-219ENST00000530404 EFCAB6Q5THR3 1501 aa32.28■■■□□ 2.76
TSPAN4-219ENST00000530404 FAM50AQ14320 339 aaKnown RBP32.28■■■□□ 2.76
TSPAN4-219ENST00000530404 MED1Q15648 1581 aaPredicted RBP32.26■■■□□ 2.75
TSPAN4-219ENST00000530404 STAG3Q9UJ98 1225 aa32.24■■■□□ 2.75
TSPAN4-219ENST00000530404 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
TSPAN4-219ENST00000530404 TMEM2Q9UHN6 1383 aa32.21■■■□□ 2.75
TSPAN4-219ENST00000530404 EID1Q9Y6B2 187 aa32.21■■■□□ 2.75
TSPAN4-219ENST00000530404 IDI1Q13907 227 aa32.2■■■□□ 2.75
TSPAN4-219ENST00000530404 ADGRB3O60242 1522 aa32.18■■■□□ 2.74
TSPAN4-219ENST00000530404 NOS1P29475 1434 aa32.17■■■□□ 2.74
TSPAN4-219ENST00000530404 GCC2Q8IWJ2 1684 aa32.17■■■□□ 2.74
TSPAN4-219ENST00000530404 TET3O43151 1660 aa32.16■■■□□ 2.74
TSPAN4-219ENST00000530404 ANKRD50Q9ULJ7 1429 aa32.16■■■□□ 2.74
TSPAN4-219ENST00000530404 UNC13BO14795 1591 aa32.11■■■□□ 2.73
TSPAN4-219ENST00000530404 E9PCH4 1651 aa32.07■■■□□ 2.72
TSPAN4-219ENST00000530404 RPRD2Q5VT52 1461 aaKnown RBP32.06■■■□□ 2.72
TSPAN4-219ENST00000530404 SLC26A8Q96RN1 970 aa32.05■■■□□ 2.72
TSPAN4-219ENST00000530404 TMEM131LA2VDJ0 1609 aa32.02■■■□□ 2.72
TSPAN4-219ENST00000530404 SLC52A1Q9NWF4 448 aa32.02■■■□□ 2.72
TSPAN4-219ENST00000530404 NWD1Q149M9 1564 aa31.99■■■□□ 2.71
TSPAN4-219ENST00000530404 CHD2O14647 1828 aaKnown RBP31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms