RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
CTSB-217ENST00000530296 SPATA31D1Q6ZQQ2 1576 aa21.69■■□□□ 1.06
CTSB-217ENST00000530296 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
CTSB-217ENST00000530296 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
CTSB-217ENST00000530296 FGD6Q6ZV73 1430 aa21.66■■□□□ 1.06
CTSB-217ENST00000530296 MBD5Q9P267 1494 aa21.65■■□□□ 1.06
CTSB-217ENST00000530296 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
CTSB-217ENST00000530296 ILDR2Q71H61 639 aa21.65■■□□□ 1.06
CTSB-217ENST00000530296 ZNF335Q9H4Z2 1342 aaPredicted RBP21.64■■□□□ 1.05
CTSB-217ENST00000530296 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.05
CTSB-217ENST00000530296 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.05
CTSB-217ENST00000530296 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
CTSB-217ENST00000530296 UBAP1LF5GYI3 381 aa21.62■■□□□ 1.05
CTSB-217ENST00000530296 PTPN23Q9H3S7 1636 aa21.62■■□□□ 1.05
CTSB-217ENST00000530296 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
CTSB-217ENST00000530296 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
CTSB-217ENST00000530296 DNMT1P26358 1616 aaKnown RBP21.58■■□□□ 1.05
CTSB-217ENST00000530296 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
CTSB-217ENST00000530296 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
CTSB-217ENST00000530296 KIF3BO15066 747 aa21.56■■□□□ 1.04
CTSB-217ENST00000530296 TNRQ92752 1358 aa21.56■■□□□ 1.04
CTSB-217ENST00000530296 PZPP20742 1482 aa21.56■■□□□ 1.04
CTSB-217ENST00000530296 CPS1P31327 1500 aa21.55■■□□□ 1.04
CTSB-217ENST00000530296 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
CTSB-217ENST00000530296 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
CTSB-217ENST00000530296 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
CTSB-217ENST00000530296 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
CTSB-217ENST00000530296 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
CTSB-217ENST00000530296 TOM1O60784 492 aa21.51■■□□□ 1.03
CTSB-217ENST00000530296 ANKLE2Q86XL3 938 aa21.51■■□□□ 1.03
CTSB-217ENST00000530296 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
CTSB-217ENST00000530296 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
CTSB-217ENST00000530296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.032e-6■■□□□ 11.9
CTSB-217ENST00000530296 DAPK1P53355 1430 aa21.48■■□□□ 1.03
CTSB-217ENST00000530296 ABCC5O15440 1437 aa21.47■■□□□ 1.03
CTSB-217ENST00000530296 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
CTSB-217ENST00000530296 NEURL4Q96JN8 1562 aa21.45■■□□□ 1.02
CTSB-217ENST00000530296 UGGT1Q9NYU2 1555 aa21.45■■□□□ 1.02
CTSB-217ENST00000530296 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
CTSB-217ENST00000530296 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
CTSB-217ENST00000530296 MED14O60244 1454 aa21.45■■□□□ 1.02
CTSB-217ENST00000530296 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
CTSB-217ENST00000530296 ZC3H13Q5T200 1668 aaKnown RBP21.42■■□□□ 1.02
CTSB-217ENST00000530296 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
CTSB-217ENST00000530296 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
CTSB-217ENST00000530296 NPHP4O75161 1426 aaPredicted RBP21.39■■□□□ 1.02
CTSB-217ENST00000530296 RNF17Q9BXT8 1623 aaKnown RBP21.39■■□□□ 1.01
CTSB-217ENST00000530296 EIF2AK4Q9P2K8 1649 aaKnown RBP21.38■■□□□ 1.01
CTSB-217ENST00000530296 PIP4K2BP78356 416 aa21.38■■□□□ 1.01
CTSB-217ENST00000530296 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
CTSB-217ENST00000530296 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
CTSB-217ENST00000530296 HSPA1LP34931 641 aa21.36■■□□□ 1.01
CTSB-217ENST00000530296 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
CTSB-217ENST00000530296 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
CTSB-217ENST00000530296 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
CTSB-217ENST00000530296 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
CTSB-217ENST00000530296 ABCC3O15438 1527 aa21.34■■□□□ 1.01
CTSB-217ENST00000530296 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1.01
CTSB-217ENST00000530296 ROCK1Q13464 1354 aa21.33■■□□□ 1
CTSB-217ENST00000530296 ERBINQ96RT1 1412 aa21.32■■□□□ 1
CTSB-217ENST00000530296 ERVK-7P63135 1459 aa21.31■■□□□ 1
CTSB-217ENST00000530296 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
CTSB-217ENST00000530296 ITGAEP38570 1179 aa21.3■■□□□ 1
CTSB-217ENST00000530296 SYNMO15061 1565 aa21.29■■□□□ 1
CTSB-217ENST00000530296 ARHGAP31Q2M1Z3 1444 aa21.26■□□□□ 0.99
CTSB-217ENST00000530296 LRRC7Q96NW7 1537 aa21.24■□□□□ 0.99
CTSB-217ENST00000530296 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
CTSB-217ENST00000530296 SCAF11Q99590 1463 aaKnown RBP21.24■□□□□ 0.99
CTSB-217ENST00000530296 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
CTSB-217ENST00000530296 ANKRD50Q9ULJ7 1429 aa21.23■□□□□ 0.99
CTSB-217ENST00000530296 MROH1Q8NDA8 1641 aa21.23■□□□□ 0.99
CTSB-217ENST00000530296 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
CTSB-217ENST00000530296 CEP152O94986 1710 aa21.21■□□□□ 0.99
CTSB-217ENST00000530296 SLIT1O75093 1534 aa21.21■□□□□ 0.99
CTSB-217ENST00000530296 PRDM15P57071 1507 aaPredicted RBP21.2■□□□□ 0.98
CTSB-217ENST00000530296 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
CTSB-217ENST00000530296 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
CTSB-217ENST00000530296 KANK1Q14678 1352 aa21.19■□□□□ 0.98
CTSB-217ENST00000530296 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
CTSB-217ENST00000530296 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
CTSB-217ENST00000530296 TXNDC2Q86VQ3 553 aa21.18■□□□□ 0.98
CTSB-217ENST00000530296 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
CTSB-217ENST00000530296 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.97
CTSB-217ENST00000530296 LTKP29376 864 aa21.13■□□□□ 0.97
CTSB-217ENST00000530296 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
CTSB-217ENST00000530296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.97
CTSB-217ENST00000530296 TMEM2Q9UHN6 1383 aa21.11■□□□□ 0.97
CTSB-217ENST00000530296 NAIPQ13075 1403 aa21.1■□□□□ 0.97
CTSB-217ENST00000530296 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
CTSB-217ENST00000530296 GCC2Q8IWJ2 1684 aa21.09■□□□□ 0.97
CTSB-217ENST00000530296 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
CTSB-217ENST00000530296 FAM135BQ49AJ0 1406 aa21.08■□□□□ 0.97
CTSB-217ENST00000530296 PIK3C2BO00750 1634 aa21.07■□□□□ 0.96
CTSB-217ENST00000530296 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
CTSB-217ENST00000530296 UNC13BO14795 1591 aa21.06■□□□□ 0.96
CTSB-217ENST00000530296 KCNA6P17658 529 aa21.04■□□□□ 0.96
CTSB-217ENST00000530296 SLC52A1Q9NWF4 448 aa21.04■□□□□ 0.96
CTSB-217ENST00000530296 XIRP1Q702N8 1843 aaKnown RBP21.04■□□□□ 0.96
CTSB-217ENST00000530296 IDI1Q13907 227 aa21.03■□□□□ 0.96
CTSB-217ENST00000530296 NUP155O75694 1391 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms