RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 NAP1L2Q9ULW6 460 aaPredicted RBP9.21□□□□□ -0.93
MACF1-229ENST00000530262 PRXQ9BXM0 1461 aa9.21□□□□□ -0.94
MACF1-229ENST00000530262 RCAN3Q9UKA8 241 aa9.21□□□□□ -0.94
MACF1-229ENST00000530262 RAPGEF3O95398 923 aa9.21□□□□□ -0.94
MACF1-229ENST00000530262 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
MACF1-229ENST00000530262 RBM19Q9Y4C8 960 aaKnown RBP9.21□□□□□ -0.94
MACF1-229ENST00000530262 GRIN2AQ12879 1464 aa9.21□□□□□ -0.94
MACF1-229ENST00000530262 CASKIN1Q8WXD9 1431 aa9.2□□□□□ -0.94
MACF1-229ENST00000530262 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
MACF1-229ENST00000530262 PHLDB1Q86UU1 1377 aa9.2□□□□□ -0.94
MACF1-229ENST00000530262 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
MACF1-229ENST00000530262 DEKP35659 375 aaKnown RBP9.19□□□□□ -0.94
MACF1-229ENST00000530262 NCOA2Q15596 1464 aa9.19□□□□□ -0.94
MACF1-229ENST00000530262 TRAK1Q9UPV9 953 aa9.19□□□□□ -0.94
MACF1-229ENST00000530262 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
MACF1-229ENST00000530262 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 MYOM3Q5VTT5 1437 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 MAGI1Q96QZ7 1491 aaPredicted RBP9.18□□□□□ -0.94
MACF1-229ENST00000530262 CDK13Q14004 1512 aaKnown RBP9.18□□□□□ -0.94
MACF1-229ENST00000530262 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
MACF1-229ENST00000530262 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
MACF1-229ENST00000530262 DRC7Q8IY82 874 aa9.17□□□□□ -0.94
MACF1-229ENST00000530262 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
MACF1-229ENST00000530262 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
MACF1-229ENST00000530262 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
MACF1-229ENST00000530262 SYAP1Q96A49 352 aaPredicted RBP9.17□□□□□ -0.94
MACF1-229ENST00000530262 PLB1Q6P1J6 1458 aa9.16□□□□□ -0.94
MACF1-229ENST00000530262 UACAQ9BZF9 1416 aa9.16□□□□□ -0.94
MACF1-229ENST00000530262 CCDC144AA2RUR9 1427 aa9.16□□□□□ -0.94
MACF1-229ENST00000530262 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
MACF1-229ENST00000530262 FYCO1Q9BQS8 1478 aa9.16□□□□□ -0.94
MACF1-229ENST00000530262 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.94
MACF1-229ENST00000530262 EFCAB5A4FU69 1503 aa9.15□□□□□ -0.94
MACF1-229ENST00000530262 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
MACF1-229ENST00000530262 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.95
MACF1-229ENST00000530262 U2AF1L5P0DN76 240 aaPredicted RBP9.15□□□□□ -0.95
MACF1-229ENST00000530262 U2AF1Q01081 240 aaKnown RBP eCLIP9.15□□□□□ -0.958e-7■□□□□ 9.5
MACF1-229ENST00000530262 TAOK2Q9UL54 1235 aa9.15□□□□□ -0.95
MACF1-229ENST00000530262 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
MACF1-229ENST00000530262 CUL7Q14999 1698 aa9.14□□□□□ -0.95
MACF1-229ENST00000530262 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
MACF1-229ENST00000530262 GPATCH3Q96I76 525 aa9.14□□□□□ -0.95
MACF1-229ENST00000530262 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
MACF1-229ENST00000530262 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 KIAA2012Q0VF49 1180 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 NGDNQ8NEJ9 315 aaKnown RBP9.13□□□□□ -0.95
MACF1-229ENST00000530262 CSPP1Q1MSJ5 1256 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 HMMRO75330 724 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
MACF1-229ENST00000530262 CSB-PGBD3P0DP91 1061 aa9.12□□□□□ -0.95
MACF1-229ENST00000530262 TPM4P67936 248 aa9.12□□□□□ -0.95
MACF1-229ENST00000530262 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
MACF1-229ENST00000530262 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
MACF1-229ENST00000530262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.12□□□□□ -0.95
MACF1-229ENST00000530262 IPO9Q96P70 1041 aaKnown RBP9.11□□□□□ -0.95
MACF1-229ENST00000530262 BIVM-ERCC5R4GMW8 1640 aa9.11□□□□□ -0.95
MACF1-229ENST00000530262 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
MACF1-229ENST00000530262 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
MACF1-229ENST00000530262 MINK1Q8N4C8 1332 aaPredicted RBP9.11□□□□□ -0.95
MACF1-229ENST00000530262 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
MACF1-229ENST00000530262 CENPJQ9HC77 1338 aaPredicted RBP9.1□□□□□ -0.95
MACF1-229ENST00000530262 ANKRD50Q9ULJ7 1429 aa9.1□□□□□ -0.95
MACF1-229ENST00000530262 GOLGA6L3A6NEY3 463 aa9.1□□□□□ -0.95
MACF1-229ENST00000530262 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
MACF1-229ENST00000530262 MYBBP1AQ9BQG0 1328 aaKnown RBP9.09□□□□□ -0.95
MACF1-229ENST00000530262 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
MACF1-229ENST00000530262 APBB1O00213 710 aa9.09□□□□□ -0.95
MACF1-229ENST00000530262 CCDC34Q96HJ3 373 aa9.09□□□□□ -0.95
MACF1-229ENST00000530262 CD109Q6YHK3 1445 aa9.09□□□□□ -0.95
MACF1-229ENST00000530262 EHBP1L1Q8N3D4 1523 aa9.08□□□□□ -0.96
MACF1-229ENST00000530262 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
MACF1-229ENST00000530262 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
MACF1-229ENST00000530262 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
MACF1-229ENST00000530262 PHF14O94880 888 aa9.07□□□□□ -0.96
MACF1-229ENST00000530262 SLKQ9H2G2 1235 aaPredicted RBP9.07□□□□□ -0.96
MACF1-229ENST00000530262 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
MACF1-229ENST00000530262 C9orf84Q5VXU9 1444 aa9.07□□□□□ -0.96
MACF1-229ENST00000530262 ST20-MTHFSA0A0A6YYL1 179 aa9.06□□□□□ -0.96
MACF1-229ENST00000530262 TSHZ2Q9NRE2 1034 aa9.06□□□□□ -0.96
MACF1-229ENST00000530262 TMEM132EQ6IEE7 984 aa9.06□□□□□ -0.96
MACF1-229ENST00000530262 ST18O60284 1047 aa9.06□□□□□ -0.96
MACF1-229ENST00000530262 EIF4G3O43432 1585 aaKnown RBP9.05□□□□□ -0.96
MACF1-229ENST00000530262 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 CENPQQ7L2Z9 268 aaPredicted RBP9.05□□□□□ -0.96
MACF1-229ENST00000530262 TRIM6-TRIM34B2RNG4 842 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 CLSTN1O94985 981 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
MACF1-229ENST00000530262 TIAM1Q13009 1591 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 GORABQ5T7V8 394 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 USP35Q9P2H5 1018 aa9.05□□□□□ -0.96
MACF1-229ENST00000530262 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
MACF1-229ENST00000530262 ISY1Q9ULR0 285 aaKnown RBP9.04□□□□□ -0.96
MACF1-229ENST00000530262 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
MACF1-229ENST00000530262 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
MACF1-229ENST00000530262 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
MACF1-229ENST00000530262 CCDC146Q8IYE0 955 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms