RNA–Protein interactions for RNA: ENST00000530186.1

PABPC4-224, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 352 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-224ENST00000530186 ZNF644Q9H582 1327 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-224ENST00000530186 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
PABPC4-224ENST00000530186 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-224ENST00000530186 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
PABPC4-224ENST00000530186 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
PABPC4-224ENST00000530186 CPS1P31327 1500 aa11.87□□□□□ -0.51
PABPC4-224ENST00000530186 HSPA1LP34931 641 aa11.87□□□□□ -0.51
PABPC4-224ENST00000530186 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
PABPC4-224ENST00000530186 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
PABPC4-224ENST00000530186 PZPP20742 1482 aa11.86□□□□□ -0.51
PABPC4-224ENST00000530186 MED14O60244 1454 aa11.85□□□□□ -0.51
PABPC4-224ENST00000530186 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-224ENST00000530186 GGT6Q6P531 493 aa11.85□□□□□ -0.51
PABPC4-224ENST00000530186 RTEL1-TNFRSF6BF6WH68 1400 aa11.85□□□□□ -0.51
PABPC4-224ENST00000530186 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
PABPC4-224ENST00000530186 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
PABPC4-224ENST00000530186 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
PABPC4-224ENST00000530186 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
PABPC4-224ENST00000530186 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
PABPC4-224ENST00000530186 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
PABPC4-224ENST00000530186 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
PABPC4-224ENST00000530186 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
PABPC4-224ENST00000530186 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
PABPC4-224ENST00000530186 TNRQ92752 1358 aa11.81□□□□□ -0.52
PABPC4-224ENST00000530186 CFAP65Q6ZU64 1925 aaKnown RBP11.81□□□□□ -0.52
PABPC4-224ENST00000530186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
PABPC4-224ENST00000530186 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
PABPC4-224ENST00000530186 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
PABPC4-224ENST00000530186 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
PABPC4-224ENST00000530186 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
PABPC4-224ENST00000530186 CEP152O94986 1710 aa11.79□□□□□ -0.52
PABPC4-224ENST00000530186 SYNMO15061 1565 aa11.79□□□□□ -0.52
PABPC4-224ENST00000530186 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
PABPC4-224ENST00000530186 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
PABPC4-224ENST00000530186 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
PABPC4-224ENST00000530186 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
PABPC4-224ENST00000530186 NLRP1Q9C000 1473 aa11.78□□□□□ -0.52
PABPC4-224ENST00000530186 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
PABPC4-224ENST00000530186 ABCC3O15438 1527 aa11.77□□□□□ -0.52
PABPC4-224ENST00000530186 PIP4K2BP78356 416 aa11.77□□□□□ -0.53
PABPC4-224ENST00000530186 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
PABPC4-224ENST00000530186 RGS17Q9UGC6 210 aaPredicted RBP11.76□□□□□ -0.53
PABPC4-224ENST00000530186 MTUS2Q5JR59 1369 aa11.76□□□□□ -0.53
PABPC4-224ENST00000530186 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
PABPC4-224ENST00000530186 KIF3BO15066 747 aa11.75□□□□□ -0.53
PABPC4-224ENST00000530186 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
PABPC4-224ENST00000530186 TOM1O60784 492 aa11.74□□□□□ -0.53
PABPC4-224ENST00000530186 ERVK-7P63135 1459 aa11.74□□□□□ -0.53
PABPC4-224ENST00000530186 ARHGAP23Q9P227 1491 aa11.73□□□□□ -0.53
PABPC4-224ENST00000530186 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
PABPC4-224ENST00000530186 SLIT1O75093 1534 aa11.71□□□□□ -0.53
PABPC4-224ENST00000530186 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.53
PABPC4-224ENST00000530186 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
PABPC4-224ENST00000530186 PIK3C2BO00750 1634 aa11.69□□□□□ -0.54
PABPC4-224ENST00000530186 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-224ENST00000530186 LTKP29376 864 aa11.68□□□□□ -0.54
PABPC4-224ENST00000530186 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
PABPC4-224ENST00000530186 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
PABPC4-224ENST00000530186 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
PABPC4-224ENST00000530186 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
PABPC4-224ENST00000530186 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
PABPC4-224ENST00000530186 TET3O43151 1660 aa11.66□□□□□ -0.54
PABPC4-224ENST00000530186 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
PABPC4-224ENST00000530186 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.54
PABPC4-224ENST00000530186 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
PABPC4-224ENST00000530186 MYO5BQ9ULV0 1848 aa11.63□□□□□ -0.55
PABPC4-224ENST00000530186 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
PABPC4-224ENST00000530186 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
PABPC4-224ENST00000530186 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
PABPC4-224ENST00000530186 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
PABPC4-224ENST00000530186 FAM135BQ49AJ0 1406 aa11.62□□□□□ -0.55
PABPC4-224ENST00000530186 DUOX2Q9NRD8 1548 aa11.61□□□□□ -0.55
PABPC4-224ENST00000530186 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
PABPC4-224ENST00000530186 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
PABPC4-224ENST00000530186 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
PABPC4-224ENST00000530186 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
PABPC4-224ENST00000530186 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
PABPC4-224ENST00000530186 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
PABPC4-224ENST00000530186 ABCC5O15440 1437 aa11.57□□□□□ -0.56
PABPC4-224ENST00000530186 MYOM3Q5VTT5 1437 aa11.57□□□□□ -0.56
PABPC4-224ENST00000530186 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
PABPC4-224ENST00000530186 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
PABPC4-224ENST00000530186 EFCAB6Q5THR3 1501 aa11.56□□□□□ -0.56
PABPC4-224ENST00000530186 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
PABPC4-224ENST00000530186 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
PABPC4-224ENST00000530186 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
PABPC4-224ENST00000530186 NOS1P29475 1434 aa11.55□□□□□ -0.56
PABPC4-224ENST00000530186 ERBINQ96RT1 1412 aa11.55□□□□□ -0.56
PABPC4-224ENST00000530186 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
PABPC4-224ENST00000530186 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
PABPC4-224ENST00000530186 LRP6O75581 1613 aa11.54□□□□□ -0.56
PABPC4-224ENST00000530186 ADGRB3O60242 1522 aa11.54□□□□□ -0.56
PABPC4-224ENST00000530186 GCC2Q8IWJ2 1684 aa11.53□□□□□ -0.56
PABPC4-224ENST00000530186 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
PABPC4-224ENST00000530186 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
PABPC4-224ENST00000530186 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
PABPC4-224ENST00000530186 IDI1Q13907 227 aa11.52□□□□□ -0.57
PABPC4-224ENST00000530186 ZFYVE9O95405 1425 aa11.52□□□□□ -0.57
PABPC4-224ENST00000530186 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
PABPC4-224ENST00000530186 KCNA6P17658 529 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms