RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 ERBINQ96RT1 1412 aa8.7□□□□□ -1.02
RPUSD4-204ENST00000530036 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
RPUSD4-204ENST00000530036 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
RPUSD4-204ENST00000530036 PRDM15P57071 1507 aaPredicted RBP8.69□□□□□ -1.02
RPUSD4-204ENST00000530036 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
RPUSD4-204ENST00000530036 CLTCQ00610 1675 aaKnown RBP8.68□□□□□ -1.02
RPUSD4-204ENST00000530036 C3P01024 1663 aa8.67□□□□□ -1.02
RPUSD4-204ENST00000530036 PTPRMP28827 1452 aa8.67□□□□□ -1.02
RPUSD4-204ENST00000530036 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
RPUSD4-204ENST00000530036 CEP152O94986 1710 aa8.66□□□□□ -1.02
RPUSD4-204ENST00000530036 UNC13BO14795 1591 aa8.66□□□□□ -1.02
RPUSD4-204ENST00000530036 KDM5DQ9BY66 1539 aa8.66□□□□□ -1.02
RPUSD4-204ENST00000530036 VWDEQ8N2E2 1590 aa8.65□□□□□ -1.02
RPUSD4-204ENST00000530036 CNTLNQ9NXG0 1405 aa8.65□□□□□ -1.02
RPUSD4-204ENST00000530036 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
RPUSD4-204ENST00000530036 ANKRD50Q9ULJ7 1429 aa8.64□□□□□ -1.03
RPUSD4-204ENST00000530036 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
RPUSD4-204ENST00000530036 ABCC3O15438 1527 aa8.64□□□□□ -1.03
RPUSD4-204ENST00000530036 KIF3BO15066 747 aa8.63□□□□□ -1.03
RPUSD4-204ENST00000530036 MLECQ14165 292 aa8.63□□□□□ -1.03
RPUSD4-204ENST00000530036 RRP7BPQ9NSQ0 103 aa8.63□□□□□ -1.03
RPUSD4-204ENST00000530036 HFM1A2PYH4 1435 aa8.63□□□□□ -1.03
RPUSD4-204ENST00000530036 NAIPQ13075 1403 aa8.63□□□□□ -1.03
RPUSD4-204ENST00000530036 IQGAP3Q86VI3 1631 aa8.62□□□□□ -1.03
RPUSD4-204ENST00000530036 PPP6R1Q9UPN7 881 aa8.62□□□□□ -1.03
RPUSD4-204ENST00000530036 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
RPUSD4-204ENST00000530036 PREX1Q8TCU6 1659 aa8.62□□□□□ -1.03
RPUSD4-204ENST00000530036 SETD1BQ9UPS6 1966 aaKnown RBP8.61□□□□□ -1.03
RPUSD4-204ENST00000530036 ITGAEP38570 1179 aa8.61□□□□□ -1.03
RPUSD4-204ENST00000530036 TET3O43151 1660 aa8.61□□□□□ -1.03
RPUSD4-204ENST00000530036 EFCAB6Q5THR3 1501 aa8.6□□□□□ -1.03
RPUSD4-204ENST00000530036 PZPP20742 1482 aa8.6□□□□□ -1.03
RPUSD4-204ENST00000530036 GGT6Q6P531 493 aa8.6□□□□□ -1.03
RPUSD4-204ENST00000530036 ZNF142P52746 1687 aaPredicted RBP8.59□□□□□ -1.03
RPUSD4-204ENST00000530036 MYO3AQ8NEV4 1616 aa8.59□□□□□ -1.03
RPUSD4-204ENST00000530036 NPATQ14207 1427 aa8.59□□□□□ -1.03
RPUSD4-204ENST00000530036 SPATA31D1Q6ZQQ2 1576 aa8.58□□□□□ -1.04
RPUSD4-204ENST00000530036 ARHGAP31Q2M1Z3 1444 aa8.58□□□□□ -1.04
RPUSD4-204ENST00000530036 E9PCH4 1651 aa8.58□□□□□ -1.04
RPUSD4-204ENST00000530036 ZMYM3Q14202 1370 aa8.58□□□□□ -1.04
RPUSD4-204ENST00000530036 CFAP65Q6ZU64 1925 aaKnown RBP8.57□□□□□ -1.04
RPUSD4-204ENST00000530036 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
RPUSD4-204ENST00000530036 KANK1Q14678 1352 aa8.57□□□□□ -1.04
RPUSD4-204ENST00000530036 WASHC2CQ9Y4E1 1318 aa8.56□□□□□ -1.04
RPUSD4-204ENST00000530036 ERVK-7P63135 1459 aa8.56□□□□□ -1.04
RPUSD4-204ENST00000530036 RPRD2Q5VT52 1461 aaKnown RBP8.56□□□□□ -1.04
RPUSD4-204ENST00000530036 CEBPAP49715 358 aaPredicted RBP8.55□□□□□ -1.04
RPUSD4-204ENST00000530036 SYNMO15061 1565 aa8.54□□□□□ -1.04
RPUSD4-204ENST00000530036 CEP170BQ9Y4F5 1589 aaPredicted RBP8.54□□□□□ -1.04
RPUSD4-204ENST00000530036 CERKQ8TCT0 537 aa8.54□□□□□ -1.04
RPUSD4-204ENST00000530036 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
RPUSD4-204ENST00000530036 SETD5Q9C0A6 1442 aa8.54□□□□□ -1.04
RPUSD4-204ENST00000530036 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
RPUSD4-204ENST00000530036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■■□□ 16.7
RPUSD4-204ENST00000530036 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
RPUSD4-204ENST00000530036 NOS1P29475 1434 aa8.53□□□□□ -1.04
RPUSD4-204ENST00000530036 UHRF1BP1Q6BDS2 1440 aa8.53□□□□□ -1.04
RPUSD4-204ENST00000530036 NUP155O75694 1391 aa8.52□□□□□ -1.05
RPUSD4-204ENST00000530036 UBR1Q8IWV7 1749 aa8.51□□□□□ -1.05
RPUSD4-204ENST00000530036 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
RPUSD4-204ENST00000530036 NLRP1Q9C000 1473 aa8.51□□□□□ -1.05
RPUSD4-204ENST00000530036 TNRQ92752 1358 aa8.51□□□□□ -1.05
RPUSD4-204ENST00000530036 RAB3GAP2Q9H2M9 1393 aa8.51□□□□□ -1.05
RPUSD4-204ENST00000530036 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
RPUSD4-204ENST00000530036 PLPPR3Q6T4P5 718 aa8.5□□□□□ -1.05
RPUSD4-204ENST00000530036 MYO5BQ9ULV0 1848 aa8.5□□□□□ -1.05
RPUSD4-204ENST00000530036 TRPM2O94759 1503 aa8.49□□□□□ -1.05
RPUSD4-204ENST00000530036 POLR1AO95602 1720 aaPredicted RBP8.49□□□□□ -1.05
RPUSD4-204ENST00000530036 STRCQ7RTU9 1775 aa8.49□□□□□ -1.05
RPUSD4-204ENST00000530036 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
RPUSD4-204ENST00000530036 ADGRB3O60242 1522 aa8.49□□□□□ -1.05
RPUSD4-204ENST00000530036 UGGT1Q9NYU2 1555 aa8.48□□□□□ -1.05
RPUSD4-204ENST00000530036 PTPRTO14522 1441 aa8.48□□□□□ -1.05
RPUSD4-204ENST00000530036 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
RPUSD4-204ENST00000530036 TMEM131LA2VDJ0 1609 aa8.47□□□□□ -1.05
RPUSD4-204ENST00000530036 CLTCL1P53675 1640 aa8.47□□□□□ -1.05
RPUSD4-204ENST00000530036 HRCP23327 699 aa8.47□□□□□ -1.05
RPUSD4-204ENST00000530036 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
RPUSD4-204ENST00000530036 KIF1BO60333 1816 aa8.46□□□□□ -1.06
RPUSD4-204ENST00000530036 ARHGAP23Q9P227 1491 aa8.45□□□□□ -1.06
RPUSD4-204ENST00000530036 SLIT1O75093 1534 aa8.45□□□□□ -1.06
RPUSD4-204ENST00000530036 NEURL4Q96JN8 1562 aa8.45□□□□□ -1.06
RPUSD4-204ENST00000530036 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
RPUSD4-204ENST00000530036 PKD2Q13563 968 aa8.44□□□□□ -1.06
RPUSD4-204ENST00000530036 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
RPUSD4-204ENST00000530036 HSPA2P54652 639 aa8.43□□□□□ -1.06
RPUSD4-204ENST00000530036 MPHOSPH9Q99550 1183 aa8.43□□□□□ -1.06
RPUSD4-204ENST00000530036 SLC52A1Q9NWF4 448 aa8.43□□□□□ -1.06
RPUSD4-204ENST00000530036 IDI1Q13907 227 aa8.42□□□□□ -1.06
RPUSD4-204ENST00000530036 IQGAP1P46940 1657 aa8.42□□□□□ -1.06
RPUSD4-204ENST00000530036 IFT172Q9UG01 1749 aa8.42□□□□□ -1.06
RPUSD4-204ENST00000530036 MED14O60244 1454 aa8.41□□□□□ -1.06
RPUSD4-204ENST00000530036 ZFYVE9O95405 1425 aa8.41□□□□□ -1.06
RPUSD4-204ENST00000530036 PPLO60437 1756 aa8.4□□□□□ -1.06
RPUSD4-204ENST00000530036 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
RPUSD4-204ENST00000530036 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.06
RPUSD4-204ENST00000530036 THEMISQ8N1K5 641 aaPredicted RBP8.4□□□□□ -1.06
RPUSD4-204ENST00000530036 NEXMIFQ5QGS0 1516 aa8.39□□□□□ -1.07
RPUSD4-204ENST00000530036 CCDC144AA2RUR9 1427 aa8.39□□□□□ -1.07
RPUSD4-204ENST00000530036 SPATA31E1Q6ZUB1 1445 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms