RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ADGRL2O95490 1459 aa19.4■□□□□ 0.7
CCDC90B-216ENST00000529856 ZMYM3Q14202 1370 aa19.39■□□□□ 0.69
CCDC90B-216ENST00000529856 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
CCDC90B-216ENST00000529856 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
CCDC90B-216ENST00000529856 EIF2AK4Q9P2K8 1649 aaKnown RBP19.39■□□□□ 0.69
CCDC90B-216ENST00000529856 MROH2AA6NES4 1674 aa19.38■□□□□ 0.69
CCDC90B-216ENST00000529856 C3P01024 1663 aa19.38■□□□□ 0.69
CCDC90B-216ENST00000529856 CLTCQ00610 1675 aaKnown RBP19.38■□□□□ 0.69
CCDC90B-216ENST00000529856 ERBINQ96RT1 1412 aa19.37■□□□□ 0.69
CCDC90B-216ENST00000529856 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
CCDC90B-216ENST00000529856 WASHC2CQ9Y4E1 1318 aa19.35■□□□□ 0.69
CCDC90B-216ENST00000529856 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-216ENST00000529856 ITGAEP38570 1179 aa19.34■□□□□ 0.69
CCDC90B-216ENST00000529856 FAM135AQ9P2D6 1515 aa19.34■□□□□ 0.69
CCDC90B-216ENST00000529856 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
CCDC90B-216ENST00000529856 KDM5DQ9BY66 1539 aa19.32■□□□□ 0.68
CCDC90B-216ENST00000529856 LMTK3Q96Q04 1460 aa19.32■□□□□ 0.68
CCDC90B-216ENST00000529856 MROH1Q8NDA8 1641 aa19.31■□□□□ 0.68
CCDC90B-216ENST00000529856 NPATQ14207 1427 aa19.3■□□□□ 0.68
CCDC90B-216ENST00000529856 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
CCDC90B-216ENST00000529856 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
CCDC90B-216ENST00000529856 ABCC3O15438 1527 aa19.27■□□□□ 0.68
CCDC90B-216ENST00000529856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCDC90B-216ENST00000529856 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
CCDC90B-216ENST00000529856 ZC3H13Q5T200 1668 aaKnown RBP19.26■□□□□ 0.67
CCDC90B-216ENST00000529856 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
CCDC90B-216ENST00000529856 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
CCDC90B-216ENST00000529856 HSPA2P54652 639 aa19.25■□□□□ 0.67
CCDC90B-216ENST00000529856 PZPP20742 1482 aa19.24■□□□□ 0.67
CCDC90B-216ENST00000529856 FBXO31Q5XUX0 539 aaPredicted RBP19.24■□□□□ 0.67
CCDC90B-216ENST00000529856 KANK1Q14678 1352 aa19.23■□□□□ 0.67
CCDC90B-216ENST00000529856 CEP152O94986 1710 aa19.22■□□□□ 0.67
CCDC90B-216ENST00000529856 VWDEQ8N2E2 1590 aa19.2■□□□□ 0.66
CCDC90B-216ENST00000529856 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
CCDC90B-216ENST00000529856 TNRQ92752 1358 aa19.19■□□□□ 0.66
CCDC90B-216ENST00000529856 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
CCDC90B-216ENST00000529856 LMTK2Q8IWU2 1503 aa19.17■□□□□ 0.66
CCDC90B-216ENST00000529856 MYO3AQ8NEV4 1616 aa19.15■□□□□ 0.66
CCDC90B-216ENST00000529856 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
CCDC90B-216ENST00000529856 NAIPQ13075 1403 aa19.15■□□□□ 0.66
CCDC90B-216ENST00000529856 UNC13BO14795 1591 aa19.15■□□□□ 0.66
CCDC90B-216ENST00000529856 ERVK-7P63135 1459 aa19.14■□□□□ 0.65
CCDC90B-216ENST00000529856 SPATA31D1Q6ZQQ2 1576 aa19.14■□□□□ 0.65
CCDC90B-216ENST00000529856 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
CCDC90B-216ENST00000529856 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
CCDC90B-216ENST00000529856 A2ML1A8K2U0 1454 aa19.12■□□□□ 0.65
CCDC90B-216ENST00000529856 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
CCDC90B-216ENST00000529856 NLRP1Q9C000 1473 aa19.1■□□□□ 0.65
CCDC90B-216ENST00000529856 NUP155O75694 1391 aa19.1■□□□□ 0.65
CCDC90B-216ENST00000529856 GCC2Q8IWJ2 1684 aa19.1■□□□□ 0.65
CCDC90B-216ENST00000529856 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
CCDC90B-216ENST00000529856 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
CCDC90B-216ENST00000529856 TET3O43151 1660 aa19.08■□□□□ 0.64
CCDC90B-216ENST00000529856 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
CCDC90B-216ENST00000529856 RPRD2Q5VT52 1461 aaKnown RBP19.06■□□□□ 0.64
CCDC90B-216ENST00000529856 THEMISQ8N1K5 641 aaPredicted RBP19.05■□□□□ 0.64
CCDC90B-216ENST00000529856 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
CCDC90B-216ENST00000529856 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
CCDC90B-216ENST00000529856 NOS1P29475 1434 aa19.04■□□□□ 0.64
CCDC90B-216ENST00000529856 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
CCDC90B-216ENST00000529856 NCKAP5LQ9HCH0 1330 aa19.02■□□□□ 0.64
CCDC90B-216ENST00000529856 PKD2Q13563 968 aa19.02■□□□□ 0.64
CCDC90B-216ENST00000529856 IDI1Q13907 227 aa19.01■□□□□ 0.63
CCDC90B-216ENST00000529856 E9PCH4 1651 aa19.01■□□□□ 0.63
CCDC90B-216ENST00000529856 TRIM52Q96A61 297 aa19■□□□□ 0.63
CCDC90B-216ENST00000529856 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
CCDC90B-216ENST00000529856 SYNMO15061 1565 aa19■□□□□ 0.63
CCDC90B-216ENST00000529856 PTPRTO14522 1441 aa19■□□□□ 0.63
CCDC90B-216ENST00000529856 UBR1Q8IWV7 1749 aa18.97■□□□□ 0.63
CCDC90B-216ENST00000529856 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
CCDC90B-216ENST00000529856 PIK3C2BO00750 1634 aa18.96■□□□□ 0.63
CCDC90B-216ENST00000529856 SETD5Q9C0A6 1442 aa18.95■□□□□ 0.62
CCDC90B-216ENST00000529856 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
CCDC90B-216ENST00000529856 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
CCDC90B-216ENST00000529856 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
CCDC90B-216ENST00000529856 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
CCDC90B-216ENST00000529856 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
CCDC90B-216ENST00000529856 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
CCDC90B-216ENST00000529856 SLIT1O75093 1534 aa18.9■□□□□ 0.62
CCDC90B-216ENST00000529856 NEURL4Q96JN8 1562 aa18.9■□□□□ 0.62
CCDC90B-216ENST00000529856 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
CCDC90B-216ENST00000529856 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
CCDC90B-216ENST00000529856 MED14O60244 1454 aa18.89■□□□□ 0.61
CCDC90B-216ENST00000529856 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
CCDC90B-216ENST00000529856 LTKP29376 864 aa18.88■□□□□ 0.61
CCDC90B-216ENST00000529856 MPHOSPH9Q99550 1183 aa18.88■□□□□ 0.61
CCDC90B-216ENST00000529856 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
CCDC90B-216ENST00000529856 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
CCDC90B-216ENST00000529856 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-216ENST00000529856 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
CCDC90B-216ENST00000529856 TMEM131LA2VDJ0 1609 aa18.86■□□□□ 0.61
CCDC90B-216ENST00000529856 SCAF11Q99590 1463 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-216ENST00000529856 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
CCDC90B-216ENST00000529856 HRCP23327 699 aa18.84■□□□□ 0.61
CCDC90B-216ENST00000529856 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
CCDC90B-216ENST00000529856 TRPM2O94759 1503 aa18.83■□□□□ 0.6
CCDC90B-216ENST00000529856 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
CCDC90B-216ENST00000529856 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-216ENST00000529856 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-216ENST00000529856 CERKQ8TCT0 537 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms