RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
CCDC90B-214ENST00000529689 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-214ENST00000529689 MYH16Q9H6N6 1097 aa12.71□□□□□ -0.37
CCDC90B-214ENST00000529689 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-214ENST00000529689 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-214ENST00000529689 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
CCDC90B-214ENST00000529689 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
CCDC90B-214ENST00000529689 ELL2O00472 640 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-214ENST00000529689 C14orf37Q86TY3 774 aa12.68□□□□□ -0.38
CCDC90B-214ENST00000529689 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-214ENST00000529689 CENPJQ9HC77 1338 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-214ENST00000529689 AFAP1Q8N556 730 aa12.67□□□□□ -0.38
CCDC90B-214ENST00000529689 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
CCDC90B-214ENST00000529689 PTPRGP23470 1445 aa12.67□□□□□ -0.38
CCDC90B-214ENST00000529689 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
CCDC90B-214ENST00000529689 SMC4Q9NTJ3 1288 aa12.66□□□□□ -0.38
CCDC90B-214ENST00000529689 KANK1Q14678 1352 aa12.66□□□□□ -0.38
CCDC90B-214ENST00000529689 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 C20orf194Q5TEA3 1177 aa12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
CCDC90B-214ENST00000529689 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
CCDC90B-214ENST00000529689 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
CCDC90B-214ENST00000529689 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-214ENST00000529689 BCAR3O75815 825 aa12.64□□□□□ -0.39
CCDC90B-214ENST00000529689 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
CCDC90B-214ENST00000529689 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
CCDC90B-214ENST00000529689 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
CCDC90B-214ENST00000529689 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
CCDC90B-214ENST00000529689 DAPK1P53355 1430 aa12.62□□□□□ -0.39
CCDC90B-214ENST00000529689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■■□ 25.7
CCDC90B-214ENST00000529689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC90B-214ENST00000529689 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-214ENST00000529689 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-214ENST00000529689 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
CCDC90B-214ENST00000529689 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
CCDC90B-214ENST00000529689 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-214ENST00000529689 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
CCDC90B-214ENST00000529689 PPP2R1AP30153 589 aa12.6□□□□□ -0.39
CCDC90B-214ENST00000529689 GSE1Q14687 1217 aa12.6□□□□□ -0.39
CCDC90B-214ENST00000529689 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
CCDC90B-214ENST00000529689 HSCBQ8IWL3 235 aa12.6□□□□□ -0.39
CCDC90B-214ENST00000529689 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
CCDC90B-214ENST00000529689 MS4A1P11836 297 aa12.59□□□□□ -0.39
CCDC90B-214ENST00000529689 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
CCDC90B-214ENST00000529689 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 ABCC5O15440 1437 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 E9PSI1 815 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 MIA2Q96PC5 1412 aa12.58□□□□□ -0.4
CCDC90B-214ENST00000529689 FRAT2O75474 233 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-214ENST00000529689 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
CCDC90B-214ENST00000529689 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
CCDC90B-214ENST00000529689 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-214ENST00000529689 PMFBP1Q8TBY8 1022 aa12.56□□□□□ -0.4
CCDC90B-214ENST00000529689 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
CCDC90B-214ENST00000529689 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
CCDC90B-214ENST00000529689 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
CCDC90B-214ENST00000529689 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
CCDC90B-214ENST00000529689 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
CCDC90B-214ENST00000529689 MTHFSP49914 203 aa12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 PLB1Q6P1J6 1458 aa12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
CCDC90B-214ENST00000529689 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
CCDC90B-214ENST00000529689 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CCDC90B-214ENST00000529689 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
CCDC90B-214ENST00000529689 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-214ENST00000529689 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-214ENST00000529689 CABP2Q9NPB3 220 aa12.52□□□□□ -0.4
CCDC90B-214ENST00000529689 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
CCDC90B-214ENST00000529689 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-214ENST00000529689 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-214ENST00000529689 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-214ENST00000529689 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-214ENST00000529689 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-214ENST00000529689 ANKRD45Q5TZF3 282 aa12.51□□□□□ -0.41
CCDC90B-214ENST00000529689 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-214ENST00000529689 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
CCDC90B-214ENST00000529689 RPRD2Q5VT52 1461 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-214ENST00000529689 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
CCDC90B-214ENST00000529689 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-214ENST00000529689 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
CCDC90B-214ENST00000529689 SLC4A10Q6U841 1118 aa12.5□□□□□ -0.41
CCDC90B-214ENST00000529689 ARID3AQ99856 593 aa12.5□□□□□ -0.41
CCDC90B-214ENST00000529689 PTMAP06454 111 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-214ENST00000529689 ARHGEF11O15085 1522 aa12.49□□□□□ -0.41
CCDC90B-214ENST00000529689 HMOX1P09601 288 aa12.49□□□□□ -0.41
CCDC90B-214ENST00000529689 RIPK4P57078 832 aa12.48□□□□□ -0.41
CCDC90B-214ENST00000529689 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
CCDC90B-214ENST00000529689 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms