RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
CTSB-215ENST00000528965 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
CTSB-215ENST00000528965 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
CTSB-215ENST00000528965 TCOF1Q13428 1488 aaKnown RBP24.72■■□□□ 1.55
CTSB-215ENST00000528965 PZPP20742 1482 aa24.71■■□□□ 1.55
CTSB-215ENST00000528965 NCKAP5LQ9HCH0 1330 aa24.71■■□□□ 1.55
CTSB-215ENST00000528965 LOC105371045A0A1W2PR82 267 aa24.71■■□□□ 1.55
CTSB-215ENST00000528965 TNRQ92752 1358 aa24.7■■□□□ 1.55
CTSB-215ENST00000528965 WASHC2CQ9Y4E1 1318 aa24.69■■□□□ 1.54
CTSB-215ENST00000528965 MAST1Q9Y2H9 1570 aa24.69■■□□□ 1.54
CTSB-215ENST00000528965 MYOM3Q5VTT5 1437 aa24.68■■□□□ 1.54
CTSB-215ENST00000528965 MIA2Q96PC5 1412 aa24.68■■□□□ 1.54
CTSB-215ENST00000528965 DNMT1P26358 1616 aaKnown RBP24.66■■□□□ 1.54
CTSB-215ENST00000528965 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.53
CTSB-215ENST00000528965 EIF2AK4Q9P2K8 1649 aaKnown RBP24.63■■□□□ 1.53
CTSB-215ENST00000528965 ZNF335Q9H4Z2 1342 aaPredicted RBP24.62■■□□□ 1.53
CTSB-215ENST00000528965 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
CTSB-215ENST00000528965 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
CTSB-215ENST00000528965 NLRP1Q9C000 1473 aa24.61■■□□□ 1.53
CTSB-215ENST00000528965 FBXO31Q5XUX0 539 aaPredicted RBP24.6■■□□□ 1.53
CTSB-215ENST00000528965 APLP2Q06481 763 aa24.59■■□□□ 1.53
CTSB-215ENST00000528965 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.53
CTSB-215ENST00000528965 ABCC3O15438 1527 aa24.57■■□□□ 1.52
CTSB-215ENST00000528965 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
CTSB-215ENST00000528965 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
CTSB-215ENST00000528965 SHANK2Q9UPX8 1470 aa24.54■■□□□ 1.52
CTSB-215ENST00000528965 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
CTSB-215ENST00000528965 NEURL4Q96JN8 1562 aa24.53■■□□□ 1.52
CTSB-215ENST00000528965 SPATA31D1Q6ZQQ2 1576 aa24.51■■□□□ 1.51
CTSB-215ENST00000528965 ANKLE2Q86XL3 938 aa24.51■■□□□ 1.51
CTSB-215ENST00000528965 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
CTSB-215ENST00000528965 UBAP1LF5GYI3 381 aa24.5■■□□□ 1.51
CTSB-215ENST00000528965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.515e-7■□□□□ 10.8
CTSB-215ENST00000528965 CPS1P31327 1500 aa24.5■■□□□ 1.51
CTSB-215ENST00000528965 MROH1Q8NDA8 1641 aa24.5■■□□□ 1.51
CTSB-215ENST00000528965 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
CTSB-215ENST00000528965 CROCC2H7BZ55 1655 aa24.5■■□□□ 1.51
CTSB-215ENST00000528965 KIF15Q9NS87 1388 aa24.49■■□□□ 1.51
CTSB-215ENST00000528965 ERBINQ96RT1 1412 aa24.49■■□□□ 1.51
CTSB-215ENST00000528965 ERVK-7P63135 1459 aa24.49■■□□□ 1.51
CTSB-215ENST00000528965 ILDR2Q71H61 639 aa24.48■■□□□ 1.51
CTSB-215ENST00000528965 DEPDC5O75140 1603 aa24.47■■□□□ 1.51
CTSB-215ENST00000528965 PRDM15P57071 1507 aaPredicted RBP24.45■■□□□ 1.51
CTSB-215ENST00000528965 ABCC5O15440 1437 aa24.45■■□□□ 1.51
CTSB-215ENST00000528965 MED14O60244 1454 aa24.45■■□□□ 1.5
CTSB-215ENST00000528965 NPHP4O75161 1426 aaPredicted RBP24.44■■□□□ 1.5
CTSB-215ENST00000528965 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
CTSB-215ENST00000528965 CEP152O94986 1710 aa24.44■■□□□ 1.5
CTSB-215ENST00000528965 DAPK1P53355 1430 aa24.44■■□□□ 1.5
CTSB-215ENST00000528965 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
CTSB-215ENST00000528965 ARHGAP31Q2M1Z3 1444 aa24.39■■□□□ 1.5
CTSB-215ENST00000528965 SOCS7O14512 581 aa24.39■■□□□ 1.49
CTSB-215ENST00000528965 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.49
CTSB-215ENST00000528965 KANK1Q14678 1352 aa24.39■■□□□ 1.49
CTSB-215ENST00000528965 VWDEQ8N2E2 1590 aa24.38■■□□□ 1.49
CTSB-215ENST00000528965 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
CTSB-215ENST00000528965 TOM1O60784 492 aa24.35■■□□□ 1.49
CTSB-215ENST00000528965 UBR1Q8IWV7 1749 aa24.34■■□□□ 1.49
CTSB-215ENST00000528965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.32■■□□□ 1.48
CTSB-215ENST00000528965 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
CTSB-215ENST00000528965 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
CTSB-215ENST00000528965 SYNMO15061 1565 aa24.3■■□□□ 1.48
CTSB-215ENST00000528965 SLIT1O75093 1534 aa24.29■■□□□ 1.48
CTSB-215ENST00000528965 LMTK2Q8IWU2 1503 aa24.29■■□□□ 1.48
CTSB-215ENST00000528965 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
CTSB-215ENST00000528965 CFAP65Q6ZU64 1925 aaKnown RBP24.27■■□□□ 1.48
CTSB-215ENST00000528965 ARHGAP23Q9P227 1491 aa24.27■■□□□ 1.48
CTSB-215ENST00000528965 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
CTSB-215ENST00000528965 ADGRL2O95490 1459 aa24.26■■□□□ 1.47
CTSB-215ENST00000528965 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
CTSB-215ENST00000528965 STAG3Q9UJ98 1225 aa24.24■■□□□ 1.47
CTSB-215ENST00000528965 PIK3C2BO00750 1634 aa24.23■■□□□ 1.47
CTSB-215ENST00000528965 FAM50AQ14320 339 aaKnown RBP24.22■■□□□ 1.47
CTSB-215ENST00000528965 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
CTSB-215ENST00000528965 KDM5AP29375 1690 aaKnown RBP24.21■■□□□ 1.47
CTSB-215ENST00000528965 EFCAB6Q5THR3 1501 aa24.21■■□□□ 1.47
CTSB-215ENST00000528965 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
CTSB-215ENST00000528965 TMEM2Q9UHN6 1383 aa24.2■■□□□ 1.46
CTSB-215ENST00000528965 HSPA1LP34931 641 aa24.2■■□□□ 1.46
CTSB-215ENST00000528965 LTKP29376 864 aa24.18■■□□□ 1.46
CTSB-215ENST00000528965 STRCP1A6NGW2 1772 aa24.18■■□□□ 1.46
CTSB-215ENST00000528965 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
CTSB-215ENST00000528965 NOS1P29475 1434 aa24.16■■□□□ 1.46
CTSB-215ENST00000528965 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
CTSB-215ENST00000528965 ADGRB3O60242 1522 aa24.15■■□□□ 1.46
CTSB-215ENST00000528965 ALKQ9UM73 1620 aa24.14■■□□□ 1.46
CTSB-215ENST00000528965 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
CTSB-215ENST00000528965 IDI1Q13907 227 aa24.12■■□□□ 1.45
CTSB-215ENST00000528965 SLC52A1Q9NWF4 448 aa24.12■■□□□ 1.45
CTSB-215ENST00000528965 TET3O43151 1660 aa24.09■■□□□ 1.45
CTSB-215ENST00000528965 UNC13BO14795 1591 aa24.06■■□□□ 1.44
CTSB-215ENST00000528965 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
CTSB-215ENST00000528965 GCC2Q8IWJ2 1684 aa24.04■■□□□ 1.44
CTSB-215ENST00000528965 KCNA6P17658 529 aa24.01■■□□□ 1.43
CTSB-215ENST00000528965 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
CTSB-215ENST00000528965 BCANQ96GW7 911 aa24■■□□□ 1.43
CTSB-215ENST00000528965 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
CTSB-215ENST00000528965 XIRP1Q702N8 1843 aaKnown RBP23.99■■□□□ 1.43
CTSB-215ENST00000528965 HDGFP51858 240 aaKnown RBP23.99■■□□□ 1.43
CTSB-215ENST00000528965 TMEM94Q12767 1356 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms